Osmerus eperlanus (European smelt): 134036375
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Entry
134036375 CDS
T10927
Symbol
chd8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X1
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
134036375 (chd8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oep03036
]
134036375 (chd8)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
134036375 (chd8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
HDA2-3
Chromo_MIT1
HTH_CHD1_Hrp3
MUN
Motif
Other DBs
NCBI-GeneID:
134036375
NCBI-ProteinID:
XP_062337277
LinkDB
All DBs
Position
16:complement(10180769..10197147)
Genome browser
AA seq
2603 aa
AA seq
DB search
MADPIMDLFDDTPLFNLDALPDDAFSQGSSDPVEEALKLALGQVDPSSDPSLDISTTPAL
SMPVAAPLTIPDPVPTQQPASVALPQTVSVATAPAQLALETVNQTTYSVASSTSGATTVL
LSSPLTVSSSSGTQQITQQQLAQSIAHQLTPQQIAAITQQAGGQGGHKIVILKGPQGQAQ
VLQTVGGTPGSPGGKVTIARVLSGTPLRPGMSILPSGTVLNQAAPGQTQVKVGTGVQRLV
QSHNGPVKQVLLTSMPQTQTQVQAGQTMQVQLPTQAQLAQAQTQVQLQNQGQPTQIQVQL
QQAMQGQPQVTTSGTVRPQGVTLTTMPQQGGEAKRITLVLQQPSQGGTGQAGTVTIGAGA
GQQRQTVQLQQAGQGGQQPRLVLGSLPGKLVLQGGQLAALTQARQAGQTGAQPKVLTIQL
QVQQQPNQQGGAKYQLVSGTGTTGSPQVVQISQGQGGQRLAVPLKLLLQPQTSSTSTAGG
TVSVVKVINTSAAGSASTTTTMAAGGIRLAKAGEPVRRVETLCKQEKANRIVAEAIARAK
ARGERNIPRVLNQDELPAGQTSADPGGAVTPPAAAKKKGGGGGGSRKKSPGSAASGGKGG
VGAEKKGKAKAAGGVAGAGGAAGVAGGGGSKSKSKAKTNTITPVGIKKRKRNASSDHSDG
ELSPASPRTLEEDLLQKRRSNRQVKRKKYTEDLDIKITDDEDDEDVDVTTTAAAVASISG
GSQLMGAQLKQELELDGDGLASMQFFVENPSEEDAAIVDKVLSMRLTKKEVSPGQYGSVE
EFFVKYKNYSYLHCEWATLEQLERDKRIHQKLKRFKAKQAQMRLLFQEEEESFNPDYVEV
DRILDESHSVDKDNGEPVIYYLVKWCSLPYEDATWELKEDVDEEKVEEFKKIQNRQARLK
RTPRPQAAAWKKLEESREYKSGNILREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQS
ISLLSEVFGAGIQGPFLVIAPLSTITNWEREFTTWTDMNAIVYHGSLASRQMIQQYEMYC
KDDKDHLIPGAYKFDALITTFEMVLSDCPELREISWRCVIIDEAHRLKNRNCKLLDSLKM
LDLEHKVLLTGTPLQNTVEELFSLLHFLEPAQFPSETEFLRDFGDLKTEEQVQKLQAILK
PMMLRRLKEDVEKNLAPKQETIIEVELTDVQKKYYRAILERNFSFLSVGVNQNSNVPNLL
NTMMELRKCCNHPYLISGAEEKIVAELREVYDPMAADFHLQALVRSAGKLVLLDKLLPRL
KAGGHKVLIFSQMVRCLDILEDYLINKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF
LLCTRAGGLGINLTAADTCVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYER
EMLDKASLKLGLDRAVLQSMSSNKESNVNGVQQFSKKEIEDLLRKGAYAAIMDEDDEGSR
FCEEDIDQILQRRATTITIESEGKGSTFSKASFVASENRTDIALDDPEFWQKWAKKADID
YDSMNRKNTLVIDTPRVRKQTRQFSTLKGEGGDLSDLDSDEEYPPHNSRQSRASRRSERH
TGVGYGRTDCFRVEKHLLVYGWGRWRDILAHARCKRRLGERDVETICRVILVFCLLHYRG
DENIKSFIWELITPPENGREPQTLLNHSGLSIPVPRGRKGKRVKAQSSFDVQKVEWIRKY
NPDSLLLDDSYRKHLKHQCNKVLLRVRMLYYLRQEVIGDHSDSVLRGADARDVDIWMPEM
EQQEVPSGWWDTEADRSLLVGVFKHGYEMYTTMRADPCLCFLERAGRPDDRAIDAEQHTG
DAELGDDGDYDKYSEDPEFKPAARHTKDLYEEPDSMAMDDEICVEDRAGPVVPEGPSSGQ
STACEWPTSSSLTARLRRLITAYQRSYRREQLKMEAAEKGDRRRRRCEQASKLKEIARQE
RQQRYLPSNSKHRWTRREECDFYRVVSTFGVERIKKEEGDPQGEEPDMDWTRFRTFARLD
KKTDESLCRYFRCFLAMCRRVCHLRPAHGEDPSEVSQSLAPITEERASRTLYRISLLRRL
RERVLPNPSLEERLPLAPPSPELPVWWSAPDHDRQLMLGAALHGVSRTELSIFSDPQFTF
NQARQDYQQALPPAPQPTSTSQGEEEPAVKKEEEEEPRPPAGETASAPEVQTTPLTHQEG
KGRARTGWGWKKSRGRGPRGSGRKRGGGGGGLSDSDSVTDSGSSSSDGSASSDESGESET
ERERAAKVCDGDEENSMLSMTPSQEGAPLTDPLRVDWPKDRVLINRLDSLCTLVLTGQWP
AGRRYTAENQLTSASDEQGGGDELSYSRLMRKGHSTPGGEGTDEQDSEFTVKLLKEEGLK
LTFSKQALMPNGAGGESSGRRKRRDQELSDPDGVVQSAERAPRRRGPPNWLKENPDYEVE
GDMLELLVNRNKRRRRRKRTEKAVTGSEKVKIIDMKTGKKVGAAFGPLLQDLGEFLEENP
DYAVAPDWAETVRSSGFLPESLFHRLLTDESDIPKRGRRRHHHHAPQPTPLEDPLLVGGE
EEDEEEETLVSDGAYMMDDEDLEDGSNLTGPHHFLPPDFDVKMEGGDSLSQGGYESSDRE
ALLDDVIMAQKDESDSSSSSSED
NT seq
7812 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccctatcatggacctgtttgacgacacgccgctgtttaacctagacgccctg
cctgatgatgccttctcccagggctcctccgatcccgtggaggaagctctgaagctggct
ctgggccaggtggacccctcctctgaccccagcctggacatctccaccaccccagccctc
agtatgccagtggcagctccccttaccatcccagacccagtccccacacagcagcctgcc
tctgtggcccttcctcagactgtgtctgtagccacagcaccagcccaactcgctctggag
actgtaaatcagaccacttactctgtagccagtagcaccagtggtgctaccaccgtcctg
ctgagttcccccctcactgtgtccagttcctcgggcacacagcagatcacacagcagcag
ctcgcccagagcatagcccaccagctcacccctcagcagatcgcagccatcacccagcag
gccggaggccagggaggacacaagatcgtcatcctcaaaggaccccagggccaagcccag
gtgctgcaaacagtcggagggacgcccgggtctcctggtggcaaagtcaccatcgccagg
gtactctcaggcacccctctccgtccaggcatgtccatacttccaagcgggacggtcttg
aaccaggcggcccccgggcagacccaggtgaaggttggcacgggcgtgcagaggctggtc
cagtcccacaacgggcctgtcaagcaggtgctgctgacctccatgccccagacgcagacg
caggtccaggctggtcagacgatgcaggtccagctgcccacacaggcccagcttgcccag
gcccagacccaggtgcagctccagaaccaggggcagcccacgcagatccaggtgcagctg
cagcaagccatgcaaggccagccacaggtcaccacctcgggcacggtccgacctcaaggt
gtcactctcaccaccatgccgcagcagggtggcgaggcaaagcgcatcactctcgtcctc
cagcaaccatcccagggcggcacaggccaggcaggaaccgtcaccatcggagcgggtgca
ggccagcagcggcagacggtgcagttgcagcaggctgggcagggcggtcagcagcctagg
ctggtgctgggctctcttccagggaagctggtcctccagggaggtcagctggctgccctc
acccaagccagacaggcaggccagaccggggcacagcccaaagtactgaccatccagctg
caggtgcagcagcagcccaaccagcagggaggagctaagtatcagctggtgtcagggacg
gggactacaggcagccctcaggtggtgcagatctcccagggccaaggaggacagagactg
gctgtgccgcttaagctgctgctgcagccacagaccagctccacgtccacagcagggggc
accgtctctgtggtgaaggtcatcaacacctccgccgccggctcggcctccaccaccacc
accatggcggctggggggatccgcctagccaaggccggcgagcccgtgcgccgcgtggag
accctgtgcaagcaggagaaggccaaccgcatagtcgccgaggccatcgccagggccaag
gcgcggggcgagaggaacatcccgcgcgtcctcaaccaggacgagctgcccgccggacag
acgtccgcagacccggggggggccgtgaccccgcctgccgcggctaagaagaagggcggc
gggggaggagggagcaggaagaagagccccgggtcggcggcctcggggggaaagggcggg
gtgggggcggagaagaagggcaaggccaaggcggcagggggggtcgctggagcaggtgga
gctgcaggcgtggccggcggtgggggcagcaagagcaagagcaaggccaagaccaacacc
atcactccagtggggattaagaagaggaagaggaacgcctcctcagaccactcagatgga
gagctgagcccagcctcgccccgcaccctggaggaggacttgctgcagaagaggcgctct
aaccggcaggtgaagaggaagaagtacacggaggacctggacatcaagatcacggacgac
gaggacgacgaggacgtggacgtgaccaccacggcggcggcggtggcgtccatcagcggg
ggatcccagctgatgggcgcgcagctgaaacaggagctggagctggacggtgacgggctg
gccagcatgcagttctttgtggaaaaccccagcgaggaggatgcggcaatcgtcgacaag
gttttgtccatgagactaacgaaaaaagaggtgtctcccggccagtatggcagtgttgag
gaattctttgtgaagtataagaactactcgtacctccactgtgagtgggccaccttggag
cagttggagagggataagaggatccaccagaagctgaagaggttcaaggccaaacaggcc
cagatgagactcctcttccaggaggaagaagagtcgttcaacccagactatgtggaggtg
gaccgtattctggacgagtcgcacagtgtggacaaagacaacggagagccggtgatctac
tacctggtgaagtggtgctccctgccgtacgaggacgccacctgggagctgaaggaggac
gtcgacgaggagaaggtggaggagttcaagaagatccagaaccgccaggctcgcctgaag
agaactccccgccctcaggctgcagcctggaagaagctggaggagtccagagagtacaag
agtggcaacatcctgagagagtaccagctggagggagtcaactggctgctcttcaactgg
tacaacaggcagaactgtatcctggcagacgagatgggcttggggaagaccatccagtcc
atctccctgctgtcggaggtgtttggggccggcatccaaggccccttccttgtcatcgcg
cccctctccaccatcacaaactgggagagggagttcaccacctggaccgacatgaacgcc
attgtttaccacggcagcttggccagcagacagatgatccagcagtatgagatgtactgc
aaggacgacaaggaccacctgatcccgggagcgtacaagttcgacgccctcatcaccacc
tttgagatggtgttgtcggactgcccggagctgagggagatctcctggcgctgcgtgatc
atcgacgaggctcaccgcctcaagaaccgcaactgtaagctgctggacagcctgaagatg
ctggacctggagcacaaggtgctgttgacgggcacgccccttcagaacaccgtggaggag
ctcttcagcctgctgcacttcctggagcccgcccagttcccctccgagaccgagttcctc
cgggactttggagacctcaaaacagaggagcaggtccagaagctccaggccatcctgaag
cccatgatgctgcgccgcctcaaggaggacgtggagaagaacttggcgcccaagcaggag
accatcatcgaggtggagctgacggacgtgcagaagaagtactaccgagccatcctggag
aggaacttcagcttcctcagcgtgggcgtcaaccagaacagcaacgtgcccaacctgctc
aacaccatgatggagctccgcaagtgctgtaaccacccctacctcatctcaggagccgag
gagaagatagtggccgagctgagggaggtgtatgaccccatggcagctgacttccacctg
caggccctggtgcgctcggcggggaagctggtgctgctggacaagctgctgccccgcctg
aaggccggcggacacaaggtgctcatcttctctcagatggtgcgctgcctggacatcctg
gaggactacctcatcaacaaaagatacctctacgagcggattgacggtcgagtcaggggt
aacctgcgccaggccgccatcgacagattcagcaaacctgactcggaccgctttgtcttc
ctactgtgtacccgcgctggaggcctgggcatcaaccttacggcagctgacacctgtgtc
atctttgactccgactggaacccccagaacgacctgcaggcccaagccaggtgtcaccgc
atcggccaatccaaggccgtcaaggtgtaccgcctcatcaccaggaactcctacgagagg
gagatgttggacaaggccagcctgaagctggggctggaccgggccgtcctgcagagcatg
agcagcaacaaggagagcaacgtcaatggggtccagcagttctccaagaaggagatcgag
gacctcctgaggaagggagcgtacgccgccatcatggacgaggacgacgagggcagccgc
ttctgcgaggaggacatcgaccagatcctccagaggagggccaccaccatcaccatcgag
agcgagggcaagggctccaccttctccaaggccagcttcgtggcgtctgagaaccggacg
gacatcgccctggacgaccccgagttctggcagaagtgggccaagaaggccgacatcgac
tacgactccatgaacagaaagaacacgctggtgatcgacactcccagggtgagaaagcag
acccgccagttctccaccctgaagggggaaggcggcgacctctccgacctggacagcgac
gaggagtacccgccccacaactcccggcagtcccgcgcctcgcggcgctccgagcgccac
accggggtgggctacggccgcacggactgcttccgtgtggagaaacacctcctcgtttat
gggtgggggcgctggcgagacatccttgcccacgcgcgctgtaagcggcgtctaggggag
cgggatgtggagaccatctgcagggtcatcctggtcttctgtctgctgcactaccgcggg
gacgagaacatcaagagcttcatctgggagctcatcacgcctccggagaacggccgggaa
cctcagacgctcctcaaccactcgggcctgagcatccctgtgcccagaggcaggaaaggc
aagagggtgaaggcccagagctccttcgacgtgcagaaggtggagtggatccgcaagtac
aaccccgactcgctgctcctggacgacagctaccgcaaacatctcaagcaccaatgcaac
aaggtgttgctgagggtgcgcatgctgtactacctcagacaggaggtcattggagaccac
tcagactcagtgttgagaggagctgatgccagggatgttgacatctggatgcctgagatg
gaacagcaggaggtgccgtcaggctggtgggacacggaggctgaccgctcactcctagtg
ggagtcttcaagcacggctatgagatgtacacaaccatgcgtgctgacccgtgcctctgt
ttcctggagcgcgctggtcgccctgacgaccgggccatcgatgccgagcaacacacgggc
gacgcagagctaggagatgacggagactatgacaagtattctgaagacccagagttcaag
cctgccgcgaggcacaccaaagacctttacgaggagcctgactccatggccatggacgat
gagatctgcgtggaggacagggcgggcccggtggtgccggaggggccgtcctctggccag
agcacagcctgtgagtggcccaccagctcgtcgctcaccgccaggctccggcgcctgatc
acggcctaccagcgcagctacaggcgggagcagctgaagatggaggcggcagagaagggt
gaccgcaggcgcaggaggtgcgagcaggccagcaagctgaaggagatcgcccggcaggaa
cgccagcagaggtatctgcccagcaacagcaagcataggtggaccaggagggaggagtgt
gacttctaccgcgtggtctccacgtttggcgtggagcgcatcaagaaggaggagggcgac
ccgcagggggaggagcccgacatggactggacccgcttccgcaccttcgcccgtctggac
aagaagaccgacgagagcctgtgtcgctacttccgctgcttcctggccatgtgccgcagg
gtttgccacctgcgcccagcccacggagaagacccctccgaggtgtcccagtctctggcc
cccatcacagaggagcgcgcctcacgcaccctctaccgcatcagcctgctgcgtcgcctc
cgggagcgcgtcctgcccaacccctccctggaggagcgcctcccgctggccccgcccagc
cccgagctgcccgtgtggtggagcgcgcccgaccacgaccgccagctcatgctgggcgcc
gccctccacggcgtcagccgcaccgagctctccatcttctccgacccgcagttcaccttc
aaccaggctcgccaggactaccagcaggccctgcccccggccccacagcccaccagcacg
tcccagggagaggaggagccagccgtgaagaaggaggaggaggaggagcctcgaccgccg
gcgggcgaaaccgccagtgccccagaggtccagaccacgcccctgactcaccaggagggc
aagggccgggcgcggactggctggggctggaagaagagcagagggagggggcccagagga
agtgggaggaagagaggaggagggggaggagggctgtcggactcagattccgttacagat
tccggctcttcgtcgtccgatggctcggccagctctgacgagagtggggagagcgaaact
gagcgagaacgagctgccaaggtgtgtgatggggatgaggagaacagcatgctctccatg
accccttcccaagagggtgcacccctgactgacccccttcgagtggactggcccaaggac
cgcgtgttgatcaaccgtctggacagcctctgcacgctggttctgactggccagtggcca
gccggacgccgctacacagctgagaaccagctgacctccgcctctgacgagcagggggga
ggagacgagctcagctactcccggctcatgcgtaaaggccacagcacccctggcggggaa
gggactgatgagcaggactctgagttcaccgtcaaactcctcaaggaggaggggttgaag
ctgacgttttccaagcaggctttgatgcccaacggggcggggggagagagcagtggacgt
aggaaacggagggaccaagagttgtcggacccagacggggtggttcaaagtgcggagagg
gcaccccggcgcaggggcccacccaactggctgaaggagaacccagactacgaggtggag
ggagacatgctggagctgcttgtcaacaggaataagaggaggaggaggaggaagaggacc
gagaaggcagtgacggggagcgagaaggtgaagatcatcgatatgaagacaggaaagaag
gtgggagcagccttcggacctctgctgcaggacctgggggagtttctagaggagaaccca
gactacgccgtagcaccagactgggcggagactgttcgaagctctggcttcctccctgag
agcctcttccaccggctcctgactgacgagtctgacatccccaagcgaggtcggcgccgt
caccaccaccacgccccccaacccaccccgctggaggaccccctgctggtgggaggcgag
gaggaagatgaagaggaggagaccctagtttccgatggggcctacatgatggacgatgaa
gacctggaggatgggagcaacctgaccggaccccaccacttcctgccccctgacttcgac
gtcaagatggagggaggtgacagtttgtcacagggcggatatgagagttcagacagggag
gccctattggacgacgtcatcatggcgcagaaggacgaatcagactcttcctcttccagc
tcagaggattga
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integrated database retrieval system
