Osmerus eperlanus (European smelt): 134040920
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Entry
134040920 CDS
T10927
Symbol
pum1
Name
(RefSeq) pumilio homolog 1 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
oep Osmerus eperlanus (European smelt)
SSDB
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Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
CFAP61_N
Motif
Other DBs
NCBI-GeneID:
134040920
NCBI-ProteinID:
XP_062343074
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All DBs
Position
20:10747211..10757912
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AA seq
1172 aa
AA seq
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MSSVCVLKRKAVLWQDSFSPHLRTTSPSMPVVLSSGGHAPQVGQTPQAPPPSQQGVAGAG
RSQDDAMVDYFFQRQHGEQPGKHRWPTGDNIHDSQVRSMDELNHDFQALALEGRAMGEQL
LTGKKFWETDDSGKDGPKGIFLDQWRDSAWGASDHSVSQPIMVSRRPGQGFHGGGEVGVG
SVMSPRSESGGLGVSMVEYVLSSSPAEKLDSCLRKGPYGQRDGEVEEEKREKPKAVFEGD
KLKELGEGDGDVISDVINPNGLPAQNGLDVDVKDFGRNQGNMPAPGPEGDLLGGPGALGG
DGMAQMGGGGGQKPPDDFSGVEQGGVSMDQMESVMEPLQFDYNSQMPMDSAPTVGLFDYT
NQQQVCPGQLLFQRPNALAVQQLTAAQQQQYALAAAQQSHIGLAPAFVPNPYIISAAPPG
TDPYAAGLAAAATLVFSAGPAVMPPQYYGVTPWGVYPANLFQQQAAAANNSANQQAAGQA
QQNQQQVMRGGGNQRPLTPSQGQQGQQNDQLVAAAAVNSALAFGQGLAAGVPGYPVLAPA
AYYDQTGALVVNTGARSGPVRLMTPASVIISPSAAQAVAAAAASANGPNGGLGGGANGPF
RGMTSQQPQQQGGGALGGSSFYGSSSLSSSSQSSSLFSQGSAQPGPGSASLGFGQAGSSS
LGPSLGATLGGFGTAGVLANSSGGSGSRRDSLTGSSDLYKRTPSSLTPIGHGGFYNGALG
FSSSPGPVGMPLPNQGPSHSLTPPPSLSNHSSSSNLNLGGLTNGSGRFISAAPGAEAKYR
SASSGSSLFSPSSQLFPSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHIMEF
SQDQHGSRFIQLKLERASSAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLDQKLA
LAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKDQNGNHVV
QKCIECVQPHALHFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTE
QLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCVTHASRAER
AVLIDEVCSLTEGPHSALYTMMKDQYANYVVQKMIDVAEPSQRKIVMHKIRPHISTLRKY
TYGKHILAKLEKYYMKNGVDLGPLCGPPNGIM
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtgtgtgtgtgttgaagaggaaagcagtgctctggcaggattcgttcagcccc
cacctcagaactacatcgcccagcatgcccgtggtgctgagcagcggaggacacgccccc
caggtcgggcagaccccccaggccccgccccctagccagcagggtgtggcgggtgcgggg
cgttcccaggacgatgccatggtggattacttcttccagaggcagcacggagagcagcca
gggaagcaccgctggcccactggtgacaacatccacgatagccaggtgcgctccatggac
gagctgaaccatgacttccaggctctcgcgttagaggggcgtgccatgggagagcagctc
ctgacgggtaagaagttctgggagactgatgactctgggaaggatggaccaaaaggcata
ttcctggaccagtggagggacagcgcatggggagcctcagatcattcggtgtctcagcca
atcatggtctctcgtcggccagggcaaggcttccatggcggtggggaggtaggggttggc
tctgtgatgtcgcccaggtcagagagcggaggtttgggggtcagcatggttgaatatgtc
ctctcctcctcacccgctgaaaaactggactcctgccttcgcaaaggaccttatggtcag
agggatggagaggtggaagaggagaagagggagaagccgaaagctgtgttcgaaggagac
aaactgaaggagctcggggagggggatggtgacgtcatcagtgatgtcatcaaccccaac
gggctgcccgcgcagaacggtctggatgtggatgtcaaagactttggtcgtaaccaaggc
aacatgccagcccctgggccggagggggatctgctggggggcccgggggctttaggtggg
gatggaatggctcaaatggggggaggcgggggtcagaaaccccccgacgacttctctggt
gtggagcaggggggcgtgtccatggaccaaatggagtcggtgatggagcctctgcagttt
gactacaactcccagatgcccatggactccgcccccactgtcggcctgtttgactacacc
aaccagcagcaggtgtgtcctggacaactgctgttccagagacccaacgccctggcagtc
cagcagctgacagcagcccagcagcagcagtatgctctggctgccgcccagcagtctcac
attggtctggccccagcgtttgtccccaacccttacatcatcagcgccgcgccgccgggg
actgacccgtatgctgcaggcctcgctgccgcggcaacgctagtattctctgcaggcccg
gcggtgatgcccccccagtactatggcgtgaccccctggggtgtgtaccctgctaacctg
ttccaacagcaggctgctgcagccaacaactcggccaatcagcaggcagcggggcaggcc
cagcagaaccaacagcaggtgatgcgtgggggaggcaaccagagacctttgaccccaagt
caggggcagcaggggcagcagaacgatcagctggtcgccgcggcagcggtcaattctgcc
cttgcctttggacaggggctggctgctggggttcccggctacccagttcttgcgccggcg
gcctactatgaccagacgggggcgctggtggtcaacactggggctcgtagcggccctgtc
cgcctgatgacccccgcctctgtcatcatatcgccctctgcagcacaggcagttgcagct
gcggcggcctcagccaatgggcccaacggcggtcttgggggcggggccaacggtcccttc
cgtggcatgacttcccagcagcctcagcaacaagggggcggggctctcggaggaagctcc
ttttatggttcttcctctctcagctcctcctcccagagctcctccctcttctctcagggc
tccgcccagcccggccctggctccgcctccttagggtttggccaggcaggctcctcctct
ctgggaccgtcactgggagctacgctgggggggtttggcactgcaggtgtgttggccaac
tccagcggtggcagtggctccagacgtgactccctgactggcagcagcgacctgtacaag
cgcacgccctccagcctcactcccattggccacggaggcttttataacggagccctgggc
ttcagctcctcccctgggccggtgggaatgcccctgcccaaccagggcccctcccactcc
ctcacccccccgccctcactatccaatcacagctcttcatccaacctcaaccttggaggc
ctgaccaatggcagtggccgtttcatctccgcagcgccgggggcggaggctaagtaccgc
agcgccagctccggctcctccctcttctctcccagcagccagctcttcccgtcgtcacgg
ctacgctatgggatgtcggacgtgatgccgtcgggtcggagtcggctgctggaggacttc
cgaaacaaccgctaccccaacctgcagctgagggagatcgctgggcacatcatggagttc
agtcaggaccagcacggcagcaggttcattcagctgaaactggagcgtgccagttcagca
gagcgccagctggtcttcagcgaaatcctccaggcagcctaccagctcatggtggacgtg
ttcggaaactacgtcatccagaagttctttgagtttggcagtctggaccagaagctggcc
ctggctgagaggatcaggggtcacgtcctgtctctggccctgcagatgtacggctgcagg
gtcatccagaaggccctcgagttcatcccctctgaccagcaagtcataagcgagatggtg
cgagagttggatggtcacgtgctgaagtgtgtgaaggatcagaacgggaatcacgtggtt
cagaagtgcatcgagtgtgttcagcctcatgccctgcatttcatcatagacgcctttaag
ggacaggtgtttgccctctcaacccacccctacggctgcagagtcatccagcgcattcta
gaacactgccttccggaacagaccctgcctatactagaagaactacaccaacacacagag
cagctggtgcaggaccagtatggtaactacgtgatccagcacgtattggagcatggaaga
gccgaggataagagcaagatagtggctgagatcagaggaaacgtgttgggactcagccaa
cacaagtttgcaagcaacgtggtggagaagtgtgtgacccacgcgtcgcgggcggagcgg
gccgtgctgatagacgaggtgtgcagcctgacggaggggcctcacagtgccttatacacc
atgatgaaggaccagtatgccaactacgtggtgcagaagatgatcgacgtggctgagccc
agccagcgcaagatcgtcatgcacaagatccggcctcacatctccactctgaggaagtac
acgtacgggaaacacatcctggccaagctggagaagtactacatgaagaacggtgtggac
ctgggccccctctgcggcccccccaacggcatcatgtaa
DBGET
integrated database retrieval system