Olea europaea var. sylvestris (wild olive): 111379437
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Entry
111379437 CDS
T05244
Name
(RefSeq) pre-mRNA-processing protein 40C isoform X1
KO
K12824
transcription elongation regulator 1
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111379437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oeu03041
]
111379437
Spliceosome [BR:
oeu03041
]
Complex A
U1 snRNP components
U1 related factors
111379437
Complex B
111379437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
RhoGAP-FF1
PBECR2
Motif
Other DBs
NCBI-GeneID:
111379437
NCBI-ProteinID:
XP_022858573
LinkDB
All DBs
Position
Unknown
AA seq
1004 aa
AA seq
DB search
MSELRSISSSTPTAPSQDASEPKQNSATAYGVVRPSFSYLNGNNPPSGSSQLSSASSAVE
QGHSPVGRNASSPTPSAHPAFLHSPVPLHSSQPGAFVPGTAAQVMTPPGPQPVGLPQGSS
SHFANFSFNGHQQLMQNNLSLETNVRANTTQEIGAIASAQVFTQSASQPALTNPSPSVTV
YASNSFSSTAAWLPPAPFQVTPGMPRTPITPGPPGIASSVSSSSNISAVPSSVDSPALPR
SFMPAAPVLSNFPIQQQTFTPYPTPFQAAPPGPWLQSPIPQISGIVRPSFSPYPTVIPGP
FPMSTRPMLPVSVSFPNTQPPGVTPAVSSVGDSASSVASGDQSTIGSVQEELPPGIDSSK
HVNNDEIKDEASVREQLDAWTAHRTESGVVYYYNSLTGVSTYEKPLGFKDEQPDKAAMQP
TPISWEKLAGTDWAVVTTNDGRRYYYNTRTQLSSWQIPNEVMELKKKQDADCLEAQSLSA
INSNVITEKGSAPVSLSTPAANTGGRDATALRPSGVSGQSSALDLIKRKLQDSGTPAATS
TGSALSGGMVLELNGSKTIEDVTKVSPHDDCIEKHKDANGDGDLSDSSSDSEDEDRGPTK
EECINQFKEMLKERGVAPFSKWDKELPKIVFDPRFKAIPSHSARRALFEHYVRTRAEEER
KEKRAAQRAAVEGFKQLLEEAKEDIDCNTDYQTFKSKWGKDPRFEVLSRKEREFLLNERV
LPLKRTAEEKAQAEHAAAISNFKSMLQDKGDITSSSRWSKVKDSLKTDARYKSIKHDDRE
KLFNEYISELKAAEKEIEGKAKTKQDEEGKLKERERALRKRKEREELEVERVRIKARRME
AAESYKALLVETIKDPQASWTGSKPKLEKDPQGRAANPHLDQSDLEKLFREHVKALHERC
VVDYKALLAEVITADAAARETEDGKTVVDSWSTAKLLLKSDPRYNKMPRKDRESLWWRHA
EEIQRKQKFVRDQETEKHAEGRSRNTVDSDKYVSGSRKATHDRK
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagctgcgctccatatctagttcaactccaactgctccttcacaagatgcatct
gaaccaaaacaaaacagtgctactgcttatggtgtcgtgcgaccttccttctcttacttg
aatgggaacaacccaccttctggaagttcacagctgtcatctgctagttcggctgttgag
cagggtcactctccagtgggaaggaatgcttcatctcctacaccatccgcacacccagca
ttcttgcattctcctgttcctttacactcctcacagcctggtgcatttgtaccaggaact
gctgcacaagtcatgacccctcctggccctcagcctgttggtcttcctcaaggaagctct
tcgcattttgcaaacttctcttttaatgggcatcagcagctgatgcagaacaacttatcg
ctggaaactaacgtaagagcaaatactactcaagagattggagcaattgcttctgcacaa
gttttcacacagtctgcttctcagcctgctcttacaaatccaagtccttcagtaactgtt
tatgcatctaatagttttagcagcacggctgcttggttgccccctgcaccatttcaggtg
actccaggaatgcctagaactcctataacgcctggtcctcctggaattgcgtcctctgta
tcttcatcttcaaatatatctgctgtcccttcatctgtggattctcctgccctcccaaga
tccttcatgcctgctgctcctgttctctctaatttcccaattcagcagcagacttttact
ccatatcctactccatttcaagcagctcctccaggaccatggttgcagtccccaatccca
cagatcagtggcattgttaggccatcattttcaccataccctactgttattcctggtcct
tttcccatgtcaactcgtcctatgctgccagtttctgtttcatttcccaatacccaacct
cctggagttactccagcagtatcttctgttggggactctgcatcttcagtggcttctggt
gaccagtcaaccattgggtcagtgcaggaagagttacctcctggcattgatagtagtaaa
catgtcaataatgatgagatcaaagatgaagcttctgtcagagaacaactggatgcctgg
acagcacacaggactgaaagtggggttgtatactattataattctttgacaggggtatct
acctatgagaaacctttgggctttaaagacgagcagcccgataaagcagccatgcagcca
actccaatttcatgggagaaactggcaggtacagattgggcagtggttactactaatgat
ggtaggagatattactacaacactagaactcagctaagcagctggcaaattcctaacgag
gtgatggagttgaaaaagaaacaggatgctgattgtttagaagctcaatcactatcggcg
ataaatagtaatgtaataactgaaaaaggatctgctccagttagtttaagtacacctgct
gctaacacaggaggtcgtgatgccactgctctgagaccctcaggtgtttctggacaatct
tctgcacttgatctcataaaaaggaagttacaggattctggaaccccagctgctacttct
acaggctctgctttgtcaggagggatggtattagaactaaatggctcaaaaacgattgaa
gacgtgaccaaggtttcaccgcacgatgactgcattgaaaagcacaaagatgctaatggt
gatggtgatttatcagattcctcttctgattcagaggacgaagacagaggtcctaccaaa
gaggagtgcatcaaccaatttaaggagatgctcaaggaacgtggtgtggcaccattctcg
aaatgggataaagaacttccaaagatagtgtttgatccacgttttaaggctatcccaagt
cacagtgctcgaagagcgctgtttgagcactatgtgcggactcgcgctgaagaggagcgg
aaagaaaaacgagctgctcagagggctgctgtggagggtttcaagcagttattggaagaa
gcaaaggaggatattgattgcaacactgattatcaaacatttaagagcaaatggggaaag
gatccacgatttgaggtcttgtcccggaaagaaagagagtttttgttgaatgaaagggtg
cttcctttgaagaggactgctgaagaaaaagcccaagcggagcatgccgctgctatatca
aatttcaagtccatgcttcaggataaaggagatattacttctagttcacgctggtcaaag
gttaaagatagcctaaaaactgatgccagatacaagtccattaagcatgatgacagggaa
aagttattcaatgaatatatatctgaattaaaagctgctgaaaaagagatagaggggaag
gcaaagacaaaacaggatgaggaggggaaacttaaagaaagagagcgagcactgcgcaag
cgaaaagaaagagaggagctagaagtggagagggtgagaattaaagctcgtagaatggag
gctgctgaatcatataaagctttattagtagagaccataaaagatcctcaggcatcttgg
acaggatcaaaaccgaagttggagaaggatcctcaaggacgtgcagccaatcctcacttg
gatcaatctgacttagaaaagctatttcgggagcatgttaaagcattgcacgagagatgt
gtggtggattataaagctctcttagccgaggtaataactgcagatgctgcagctcgagaa
acagaagatgggaaaaccgttgttgattcttggtcgacagccaaactactcttaaagagc
gatccccgttataacaagatgccaaggaaagatagagaatccttgtggtggcgacatgct
gaggaaatccagaggaagcaaaagtttgtacgcgatcaagaaacagagaagcatgcagaa
ggaagaagtcgaaacactgttgattctgacaagtatgtgtctgggtcaagaaaagctact
catgacagaaaatga
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