Olea europaea var. sylvestris (wild olive): 111409371
Help
Entry
111409371 CDS
T05244
Name
(RefSeq) RNA polymerase II transcription factor B subunit 4
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03022
Basal transcription factors
oeu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111409371
09124 Replication and repair
03420 Nucleotide excision repair
111409371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oeu03021
]
111409371
03400 DNA repair and recombination proteins [BR:
oeu03400
]
111409371
Transcription machinery [BR:
oeu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111409371
DNA repair and recombination proteins [BR:
oeu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111409371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
111409371
NCBI-ProteinID:
XP_022895217
LinkDB
All DBs
Position
1:complement(1375727..1382659)
Genome browser
AA seq
292 aa
AA seq
DB search
MAPAASKLYADDVSLLMVLIDTNPFFWNSINTSLSFSKFISNVLAFLNSILLLNQLNQVV
VIATGYNSCDYIFDSSALQNHNQKGESLLQKLEEFVDKDESLCRDDSVDGPGFSLLSGSL
SMALCYIQKVFRSGPLHPRPRILCLHGSPDGPGQYVAIMNAIFSAQRSMVPIDSCIIGAQ
HSAFLQQASYITSGIYLKPQLLDGLFQYLTTVFATDLHSRSFLQLPKPVGVDFRAACFCH
KNTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQTQDSSTPDRKRKTSVDN
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggctccagctgcgtctaagctttacgcagatgatgttagcctattgatggtgctaatc
gacaccaacccatttttctggaactccatcaatacaagtctttcgttctccaagtttatc
tccaacgtactggcgtttttgaactcaatacttttgttaaatcagctaaaccaagttgta
gtaattgcgacagggtacaattcctgcgattacatttttgattcctcagctttacagaat
cataaccaaaaaggggagagtctgctgcagaaattggaggagttcgtggacaaagacgag
tcgctgtgccgtgatgactcagttgatggacccggcttttctcttctgtctggctccctc
tccatggctctctgctatatacagaaggtgtttcgatcagggccacttcatccacggcct
cggattctatgcttgcatggatctccagatggacctggacaatatgttgcaatcatgaat
gcaattttctctgctcaacgctcaatggtgcctatagattcatgtataataggagctcaa
cattctgctttcctgcagcaggcttcctatataacaagtggcatatatctgaagcctcaa
cttttggatgggctttttcaatatctcacgaccgtttttgcaacagatctgcattctcgc
agctttttacaacttcctaagcctgtgggggtggatttccgtgcagcgtgcttttgccac
aaaaacacaattgacatgggctacatatgttctgtgtgtttgtcgatattctgcaagcat
cacaagaaatgttcaacttgcgggtcagtctttggtcaggcacaaacacaggattcgtcc
acgcctgatcggaagagaaagacttcagtcgataattga
DBGET
integrated database retrieval system
