Ostrinia furnacalis (Asian corn borer): 114351800
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Entry
114351800 CDS
T07986
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
ofu
Ostrinia furnacalis (Asian corn borer)
Pathway
ofu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ofu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114351800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ofu03019
]
114351800
Messenger RNA biogenesis [BR:
ofu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114351800
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
114351800
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
114351800
NCBI-ProteinID:
XP_028158927
LinkDB
All DBs
Position
Unknown
AA seq
2460 aa
AA seq
DB search
MNLDSLTFSLSQINYLVVNLSKKNFKQTSQELSQLVSLYGLEAENQLLRCLLTEAAKASW
DTERTGSGSNTSVHASLLTQHLTALLNHPAKSTVVCRAVDNPTRSLQKILKPSNTLLNRL
SRLLKFTTAEDVAFSLVLKRNSAKPEIVALTKQHLKKRFLDLVQCYLDAERGHQAERAGL
QECSPEVLQTLLTSLSQERLATVTKDLFLKRLRVDFPREVVPIVLAPLLYPDDTQTPLEE
MTTADDMAAAMMETSLAEIIRDIGHPFTASVEECKANMLNFGAREPTAIDVARIISMMIR
YHATVPEGPLVQTPGNFWMSHETKKDPITHGHGESWNAEVFVQTLKELASNLNWKEVILQ
LDHPEFMVPDRQGLSLLFTILRLGLQSAGYPANIFPVDYLCRRWTNLEGQMSLINMVLKH
PDVFSFADHPFHPVSIDLLKSPPETDNKEIATWRCLYLVELLVYAAERGYYLQVHELFKF
PMQHCPDVLLLALLQISPPVTVFRQELLTTLIPIFLGNHPNSGIILHHAWHTQNPNIKPI
IMHAMADWYIRGESDQSKLSRILDVAQDLKALSLLLNVQSFPFVIDLACLASRREYLKLD
KWLTDKIRDHGETFVTAMVKFLQRRCPQVLGKGPEEQLPKAAQLPPETVTTMLACLQLCV
PNVTAELQEAIYSVIANCQTLILSKTRQNIAGIARTRNAEYPRVMPGGGMETPFNPAAGL
SGQLFTPHVDSIASLTPGVANLSLGGPGNTAFAMPGTLGPLVTTPGSPSRLMGAGPNSPF
AMMPLQHNTNVANMGALARMAPAPAMDKPRIPDPIHFPEMMHNVSKEIEDEANGYFQRIY
NHPPHPTLSIDEVLDMLKKFQDSPNKREREVYSCMLRNLFEEYKFFPQYPDKELHITAQL
FGGIIEKGLVPSYVSLGLALRFVLDALRKPEGSKMYYFGIAALDRFKSRLKDYHKYCEHV
RAIPHFSEFPPHLIEYIEYGLQSQEPPTKPQGPVLPTSLAAVLNQTNVVTVSAPYRAVVC
APSSISVIAKVTNCTAGGLGSRPSIANATNIDTLLTATDREEKINAPPEAIQDKSAFIFN
NLSQLNLQTKCEELKEIITEEYFPWLSQYLVMKRASIELNFHALYSNFLDVLKIRDINRM
VTKETYRNIKVLLRSDKGIANFSDRSLLKNLGHWLGMLTLARNQPILHVDIDLKALLLEA
YHKGQQELLYVVPFVAKVLESCAKSVVFKPPNPWTMALMNVLAELHQEPDLKLNLKFEIE
VLCKNLSLDIADLKPTLYLKDPEKLRTIEFQLSQPKPNKDASSSMQVSQPIVPAPQMLIP
HPGPPPLLPTEDMAAAAPTPTGLVGTDPTLMGVLGLPEPRFNYLDVNVSSTSAFGQKICF
NPHIILFQNYPHLKQFVKPAIERSIQEWIHPVVDRSIKYALTTCEQIIRKDFALDPDEVR
MRTCAHHMMRNLTAGMAMITCREQIISTISTNLKAAFLTALMPATPQQEIVESAAAVLAT
ENMELACAFIQKTAVEKALPELDKRLLNDYEMRKIARQEGRRYYDPIVLAYQTERIPERV
RLRVSGPSDLQIAVYEEFACNIPGFMPVRDAGMFIPKPSAQDQLPQLAFSQTMNPTQVYG
ADEMSALISAAEVFLANSMAMASMAAQTANMHSLLECLFMARRNRDIVSGCALLQKAVEG
LLDSHIVSVAQGGSAEHVEMMTRYRDIHLRVLKLLEDGRVYGHVWTTKQITYCLTECREE
LRYNIEAVDCLVRNHLINLPQYDIAMAHLMDNGNNYMAVAFGMQLVQLYLVDDRNNVFAN
ESDLYHITETLYRIMSHSRQAPPEGLGALIEMLRVHQDPSAFLGERSPMGPTAHIHSGIL
QVRARDYDDPPGLQEKTENLLREWRNVLLSPLTEIEIAQNFNIYVHRMNMNGILKSDDMI
TRFFRIATQMCIENVYTILTEERTNPPTSPVKRDKYYTMCDSFMKLVTLLIKNTSESGNP
TPKLNLLNKILGIIAGCLLQDHEEHGNNFQQLPYHRLLLILFLDMNMAEPVLESMNYQVL
TAFCHTLRIIRPSVAPGFCYAWLELTAHRAFINRVLAVTPQQKVYHNICGWGMYSTLLID
LFKFLDPFLRNTELAGPVMMLYKGTLKVLLVLLHDFPEFLCDYHYGFCDEIPPNCIQMRN
LILSAFPRNMRLPDPFTPNLKVDLLAEITLPPRAVINYSTIIPSTQFKKDLDAYLKARAP
VTFLSELRSNMQVLNEPGRRYNSQLMNAVVVYVGTQAIAHIRAKGQTPNMSTIAHSAHMD
IFQNFTVDFDYEGRYLFLNAIANQLRYPNSHTHYFSCCLLYLFAEANSEAVQEQITRMLL
ERLIVNRPHPWGLLITFIELIKNPIYKFWTHEFVHCAPEIEKLPIPRANLHLRQRAGVGA
RTPAFHVGAAQASELEEAVRKQVVKWFPLGTVPRADRADTLPLPYSDKTSETYDVNPSHM
NT seq
7383 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggactctttaacgtttagcttatcgcaaatcaattatctcgtagtaaattta
agtaagaaaaacttcaagcagactagtcaagagttatcacagctggtcagtctttatggg
ctggaagcagagaatcagctcttgaggtgtttgttgacggaagcggcgaaggcatcttgg
gacaccgagcgcaccggatctggctccaacaccagcgtccacgcatctctgctcacgcag
cacctgactgcgctcctcaaccatccggccaagtccacggtcgtctgccgagctgtcgat
aaccccactcgttcactccaaaagatattaaaaccttcaaatacattactcaatcgactt
tcaagactattaaagtttaccaccgccgaggatgttgccttttctctggttttgaaaagg
aattctgctaaacctgagatagtagcattaactaagcaacatttgaaaaagagatttttg
gacctcgtacagtgttacctagacgcagaacgtgggcatcaggctgagcgtgcaggcctt
caggaatgcagccctgaagtgttgcaaactctcctcactagtttatcgcaagagagacta
gccacagtgacaaaagacttatttctcaaacgtttacgagttgatttccctcgtgaagta
gtgcctatcgtgttagcgccgttgctttacccggacgacacgcagacgccgctcgaagag
atgacgaccgccgacgacatggccgcggccatgatggaaacctccttggcggagatcatc
cgagacatcggacaccccttcaccgcctcggtggaggaatgcaaagccaacatgctgaac
ttcggtgcgcgggagcccaccgctatcgacgtggccagaatcatctccatgatgatcagg
taccacgcgaccgtccccgaaggaccgctcgtgcaaacgccgggcaacttctggatgagt
cacgaaaccaagaaagaccccatcacacacggacacggcgaatcgtggaacgccgaagtg
tttgtccagacactcaaagaactcgcatcaaacttgaactggaaagaagtcatactacag
ctcgaccatcccgagttcatggtccccgacagacaaggcctcagcctgctgttcacgatt
ttgcgactcggccttcaaagtgcgggttatccggctaacatattccctgtggattatctt
tgccgtcgatggacgaacttagaaggacagatgagtttgatcaacatggtactcaaacat
ccagacgtattcagtttcgctgaccatcccttccatccggtctcgattgatcttctaaag
tccccacctgaaactgacaacaaagaaatagccacctggcggtgcctttatttagtcgag
cttctggtgtacgccgcggagcgtgggtattacttacaagtgcacgaattattcaagttc
ccaatgcagcattgtcctgacgtcttgctcctagctctattacaaatcagtccacctgtt
acagtattcaggcaagagttactgacaacgctgataccaatattcttaggaaatcaccca
aactccggtattatactacaccacgcctggcatacacagaatccgaacataaagcctatc
atcatgcacgccatggccgactggtacatacgtggtgagagcgaccagtccaaactgtcg
aggatactcgacgttgcccaagatctcaaagcactatcgttactgctgaatgttcagtcg
ttcccctttgttatcgacttggcgtgcttagcctcccgtagagagtacctaaagctcgac
aaatggctaacggacaagatcagagaccacggcgaaacatttgtgactgcaatggtgaag
ttcttgcagaggcgatgtccgcaggtgctcggtaaagggcccgaagaacagctaccgaag
gctgcgcagctgccacccgagacggtcaccacgatgctggcctgcctgcaactctgcgtg
cccaacgtaacggcggaactacaagaagccatttacagcgtcatagccaactgccagacg
ctcatcctgagcaagacaagacaaaacatcgcgggtatagcgcggacacggaacgcagag
taccctcgagtgatgcccggcggcggcatggaaacgcccttcaatcccgcggctggtttg
agcgggcagctgttcactccgcatgttgattcgattgccagtttaacacctggtgtagct
aatttgagcttgggaggaccagggaacaccgctttcgcgatgcccggaactctagggcca
ttggtgacgacccctggctcgccttcccgattgatgggagccggccccaacagccccttc
gctatgatgcccttacaacacaacacgaacgttgcgaacatgggggcactcgctcgcatg
gcgcccgcgcctgcgatggacaaacccaggattccagaccctatacacttccctgaaatg
atgcacaacgtctcgaaggagatcgaggacgaagccaatggatatttccagcggatctac
aaccatcccccgcatccgactctgtcgatagacgaagtgctcgacatgttgaagaagttc
caagactcgccgaacaagcgcgagcgagaagtctactcgtgcatgctacgcaatctgttc
gaagaatacaaattctttccgcagtatccggacaaggaattgcatataaccgctcagcta
tttggcggtatcattgagaagggtctcgttcccagctacgtctcgctaggtttggcttta
cgattcgtacttgacgcgttgagaaagccagagggctctaaaatgtactacttcggtata
gcggcactggaccgcttcaagtcgcggttgaaagactaccacaagtactgcgaacatgtc
cgtgctatacctcattttagtgaattccctccacacctaattgagtacatcgaatatgga
ctacagagtcaagagccacccacgaaaccacaaggacccgttctacccacaagtttggct
gctgtgctgaaccaaaccaacgtagtaaccgtctcggcgccctacagggccgtggtctgc
gcaccgtcgtcgatctcggtaatcgcaaaggttaccaactgcactgcaggcggactgggc
agccgaccttcgattgctaacgccaccaacatagacactcttctaacggccacagaccga
gaagaaaagatcaatgctccacctgaagctatccaggacaaatcagcattcattttcaat
aacctcagccagttgaatctacagacgaaatgtgaagaactcaaggaaataattaccgaa
gaatacttcccatggctctcgcagtatcttgtcatgaagagagcgtccatcgaactcaac
ttccacgcactgtattccaatttccttgacgttcttaaaatccgcgacataaacagaatg
gtcactaaagagacttaccggaacataaaagtattattacgctccgataagggcattgcc
aacttttctgatcgatcgctgttgaagaacctgggccactggcttggcatgctgacgctg
gcccgcaaccagcccatcctgcacgtcgacatcgacctgaaggcgctgctactggaggcc
taccacaagggccagcaggaactgctgtacgtcgtgcccttcgtcgccaaggtgctcgag
tcctgcgccaagagcgtagtcttcaagccacccaacccctggactatggcactgatgaac
gtattggctgaattacaccaagagccagatttaaagctgaacctgaagtttgaaattgaa
gtgttgtgtaaaaacctaagtttagacattgccgacctcaagccgaccctttatttgaaa
gatccggagaaactgagaacgatcgagttccagctgtcgcaaccgaagccaaacaaggat
gcgtcgagctcgatgcaagtgagccagcctatagtgccggcgccgcagatgttaatcccg
cacccgggcccgccgccgctgctcccaaccgaagacatggccgccgcggcgcccacgccg
accgggctcgtcggcaccgacccgaccctgatgggagttttggggttgcccgaacccaga
ttcaactacctcgacgtaaacgtttcatcgacatcagcttttgggcagaagatttgtttc
aacccgcacatcattctgttccaaaactacccgcatctgaagcagttcgtgaagcctgct
attgagcgatccatccaggagtggattcatccggtcgtggataggtctatcaagtatgct
cttacgacttgcgagcagatcattcgtaaggacttcgcgcttgaccccgacgaggtccgg
atgcgcacgtgtgcacaccacatgatgaggaatctgacagccggtatggcaatgattacg
tgccgggagcagattattagcaccatcagcaccaacctcaaggccgcgttcttgacggcc
ttgatgcctgccaccccacagcaggagatcgttgaaagcgccgctgcagttctagcgact
gagaacatggagctcgcgtgcgctttcatccagaagactgcagttgaaaaggcgctgccg
gagctcgacaaacgactgctgaacgactatgagatgaggaagattgcccgccaggaggga
cggcggtactacgacccgatcgtcttggcgtaccagaccgaaaggatcccggagagagtg
cgactccgcgttagcgggcccagtgacctgcagatagcggtctacgaggaattcgcgtgc
aatatcccggggttcatgcctgtgagggacgctggcatgttcatcccgaagccctcggcc
caggaccagctgccccaactggccttcagccagacaatgaacccgacgcaagtttacggc
gccgatgagatgagcgcgctgatttcggccgcggaggtgttcctggccaactctatggcg
atggcgtcgatggccgcgcagacggcgaatatgcactcgcttctggaatgcctgttcatg
gcgaggcggaaccgcgatattgtgtctggatgtgctctactgcaaaaggccgtggaaggt
ctactagacagccacatcgtgtcggtcgcgcaaggcggcagcgcggaacacgtggagatg
atgacgcgttatcgcgacatccacttacgagtgctgaagttgttagaagacggccgcgtg
tacggacacgtgtggaccaccaaacaaattacgtactgcctcactgagtgccgcgaggag
ctcagatacaacatcgaagcggttgactgtttagtcaggaaccacctgatcaacctgcca
cagtacgacatcgcgatggcccaccttatggataacgggaacaactacatggcagtcgcg
ttcgggatgcaactggtccagctgtacctggtcgacgaccggaacaacgtgtttgcgaac
gaatccgacctgtaccacatcacagagacgttgtacaggatcatgtctcactcgcgtcag
gcgcccccagagggtctcggcgccctgattgagatgctcagggtccaccaagaccccagc
gcgtttttgggcgaacgatcgcctatgggacccacagctcacattcattcgggaatcctg
caagtacgggcgcgcgattacgacgacccgcctggcctccaagagaaaacggagaatctg
cttcgcgagtggcgtaacgtactactcagccctctcactgagatcgagattgcacagaac
ttcaacatctacgtgcaccgtatgaatatgaacggaattctcaaatcagacgatatgatc
acgcgcttcttcaggatcgctacacaaatgtgcatcgagaatgtgtacacgatactgaca
gaggagcgcacgaatccgccgaccagcccggtgaaacgcgacaagtattacacaatgtgc
gactcgttcatgaaactggtgactctcctcatcaagaacacctctgagagcggcaatcct
acgccgaagctcaatttactgaacaagatcctcggaatcatcgctggctgcttgttgcaa
gaccacgaagaacatggcaacaacttccagcaattgccttaccacagacttctcctcatc
ctgttccttgatatgaatatggctgaaccagttctcgaatctatgaactaccaggttcta
acagcattttgccatacactgcgcatcatccgaccgagtgtcgcgcccggcttctgctac
gcctggctggaactgacggcccaccgcgccttcatcaaccgggttctggccgtgacgccg
cagcaaaaggtctatcacaatatttgtggctggggcatgtactctacgttgctcatcgac
ctattcaaattcctcgatccgttcctacggaacacggaactggcgggtcccgtcatgatg
ctgtacaagggaaccctaaaggtcctccttgtactgctgcacgacttcccggagttcctg
tgcgactaccactacggtttctgcgacgagattccgccgaattgcattcaaatgaggaac
ttgattctgtccgcgttcccaaggaacatgcggctgcccgatcctttcactcctaacctg
aaggtggaccttttggcggagatcacgctgccgccgcgtgcggtcatcaactactccacc
atcataccttcgacgcagttcaagaaggatctggacgcgtacctgaaggctcgggcgccg
gtcacgttcttgtcagagctgagaagcaatatgcaggtgttgaacgagcccggccgccgc
tacaacagccagctaatgaacgctgtggtggtgtacgtcggaacgcaagcgatcgcgcac
atccgcgcgaagggtcagacgcccaacatgtcgaccatcgcgcattccgcgcacatggac
atattccaaaatttcacggtcgacttcgactatgagggaagatatctattcttgaacgcg
atcgcgaaccagctgcgctacccgaacagccacacgcactatttctcctgctgcctcctg
tacttgttcgcggaggccaactcggaagcggtccaggaacagattaccaggatgctgctt
gaaaggctcatcgtcaaccggccccacccctggggacttctcatcacattcatcgaactc
atcaagaacccaatctacaagttctggactcatgagttcgtacactgcgcccccgagatc
gaaaagcttccaataccacgcgcaaatctgcatttgcgccaacgagccggagtcggagcc
cgaaccccagccttccacgtcggggctgcccaagcctctgaactggaagaagctgttcgc
aaacaagtcgtaaagtggttccctctaggcacggtgccgcgcgccgaccgcgcggacact
ttacctctaccttacagtgacaagactagtgaaacttacgacgtaaacccctcgcatatg
tga
DBGET
integrated database retrieval system
