Ostrinia furnacalis (Asian corn borer): 114358720
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Entry
114358720 CDS
T07986
Name
(RefSeq) PAN2-PAN3 deadenylation complex catalytic subunit PAN2
KO
K12571
PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:
3.1.13.4
]
Organism
ofu
Ostrinia furnacalis (Asian corn borer)
Pathway
ofu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ofu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114358720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ofu03019
]
114358720
Enzymes [BR:
ofu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
114358720
Messenger RNA biogenesis [BR:
ofu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114358720
mRNA degradation factors
3'-5' decay
Pan complex
114358720
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH_1
PAN2_N
UCH
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_1st
zf-CCCH_2
WD40_Prp19
Beta-prop_WDR5
Motif
Other DBs
NCBI-GeneID:
114358720
NCBI-ProteinID:
XP_028168558
LinkDB
All DBs
Position
Unknown
AA seq
1009 aa
AA seq
DB search
MEFHYSDLCLPTDHLLTDPYAAEFTPQYMIPNHNAEYEVRSSVLVDGGDRFGVSAVVFDK
FEELIWMGNQGGHVTSYYGPSMQKYTSFQVHESEEVRDIITVEQGIYALTKTALRHQIRR
GIPKNTYRSDNMTDMQCLYQVSTTKLLMGGHQDKLLELDLTKMKDTVIPIQEEGCAVLRS
GGGSLVACGSADGMVALRDIRTPKAAEHTFRAHSACLSDLDMQGDLLITCGFTQSSGGAV
AEPYVVVWDVRCLRGMNAAGGGAWSLQTRSPPLLLHFLPAFSGRAVALSADGHVALLHLN
APDTENQSVFQVDTHSSVCSVMDVSSTSQALAFGDQAGHLHLFSPQHNHEPVFNNFSRAT
EFADQVVGLPFANFNDTNFQYSSVPLPQLSSGPKWFNVLPEEFFKRNFRRPKPVDAEVLK
TMKMQGPIGYAPNPKTFKRNQMPYVEDNFEDLNAAKLNESKYSPQPIPKHYQKVELRYNK
HGPNDIDLENCNKTGFPGIEATLPNSYCNSMLQVLYYTPPVKSTLLAHTCAKEFCLSCEL
GFLFRMLDTSGGAACQANNFLRAFRTVPEAAALGLILPDRGPAPRADLIALIQSWNRFIL
HQIHYEILETRKKEKELAILTQNSSPPKARVANAKQPRSLATPHMNGQYTAEEYQYTELE
FLGPSTEFEPEEFGRELREDGWQAREEAIFGLPDFLVETEPVTNCENHELPNNRHVGREE
SEISHLFAIGRNQLNRCLKCNKEEERESVVLACALQYPTGAPREGGDTRGGFVELVRASL
AARRSTPAWCEHCSRFTPTTQRGRIVRLPPILAINCGGPHEKAYWMKGNQKDVPEVVRRG
GSSKPCRYGLHCARPGCRFKHPDRPASASASSRRSEARDTHCVLPHRLMIRLQADGDVII
NDKTEQSPTEPHTPRNKPDKHKKPVTTQSEEEYTLQAAVVCVEDNPKNLVAYVQTNKEDA
QWHLFNDLSIVPVSEEEVFQFGTWWKTPCVLFYSTLAARVTPPEEAVPS
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggagtttcattattccgatctttgtctaccgactgaccatcttctgactgatccgtat
gcagccgagttcacccctcagtatatgattcccaaccacaatgcagagtatgaggtacga
agcagtgtcctagtggatggaggagatagattcggagtctccgcagtagttttcgacaag
ttcgaagagttaatatggatgggaaatcaaggtggtcatgtgacctcatattacggaccg
agcatgcaaaaatacacatcattccaagtacatgagtcagaggaagtaagggacataatc
acagtcgaacaaggcatctacgctttgaccaagaccgctctacgtcaccaaattagaaga
ggcatccctaaaaatacctataggtcagacaacatgacagacatgcaatgtctttaccaa
gtaagcactacaaaactcttgatgggaggacaccaagataaactgcttgagttggatctc
actaaaatgaaggatacagtcattcctatccaagaagaaggttgcgccgtgctccgtagc
ggtggtggatctcttgtagcctgcggtagcgctgacggaatggtggcccttcgcgacata
aggacgcctaaagcggccgagcatacgtttagagcacattcggcttgcctctcagacctg
gacatgcaaggtgacctgttgatcacttgtggattcacacagtcatcgggtggagcggta
gcggagccatacgttgtagtgtgggacgtccgctgccttcgcggtatgaacgcagcgggc
gggggggcgtggtctctccagacccgctcccctcccctcttgcttcacttcctacccgcg
ttctcgggcagagcggtcgcgttgtcggccgatggtcacgtggcattgctgcatcttaac
gcgcctgacactgagaaccagtcggtattccaggtcgacacacacagttcggtatgtagc
gtgatggacgtgtcttccaccagccaagcgctcgcgttcggggaccaggctggccatctc
catctgttctcgccgcagcacaaccacgagcccgtgtttaataacttttcaagagcaaca
gaattcgcagaccaagtagtaggcttgccgttcgccaactttaacgacacaaacttccag
tattcgtcagttccactgccgcagctttcatctggtccaaaatggtttaacgtactcccc
gaagaattcttcaaaaggaatttcaggagaccaaagccagtggatgcagaagtgctcaaa
acaatgaaaatgcaaggacctataggatatgcaccaaaccctaagacttttaaaaggaat
cagatgccgtacgtagaagataattttgaagatttgaacgcagcgaaactaaacgaaagt
aaatacagcccacaaccaattcccaagcattatcagaaggttgagttacgatacaataaa
cacggacctaatgatattgacttggagaattgtaacaaaacgggctttccagggatcgaa
gctacattaccaaattcgtattgtaattcaatgcttcaggtcctttactacacaccccca
gtcaagtctacactattagctcacacatgtgctaaagaattttgccttagctgtgaatta
gggttcttattccgaatgctggatacgtctggcggcgcagcgtgccaagcgaataacttc
cttcgggcgttccgaacggtgcctgaggctgcggctttgggtctcatactgccagaccgc
gggccggcgcctcgggctgacttgatagcgcttatacagagctggaaccgcttcatcctc
caccagatccactacgaaatactagaaacgcgaaagaaagagaaggagctagcgatacta
acgcaaaacagtagtccgccgaaagcgcgggttgccaacgcgaagcaaccgagaagtttg
gcaacgccgcacatgaatggacaatatactgcagaggagtatcagtacacggagttagag
ttcctaggaccgtctacggagtttgaaccggaggagtttgggagggaattgagggaggat
gggtggcaagcgagagaagaggcaatatttgggcttccagattttttagttgagacagaa
ccagtaacgaattgtgagaaccacgagcttccaaacaatcgtcacgtcggacgtgaggaa
tctgagatatcgcacttgttcgccattggacgcaaccagttgaacaggtgtctgaagtgt
aacaaagaggaagaacgcgaatcagtagtgttagcgtgcgcgctccaatacccaacgggc
gcgccgcgcgaaggtggcgacacgcgcggcggcttcgtggaactagtgcgggcgtcactt
gcggcaagacgtagtacgccggcctggtgcgagcactgttcgcggttcacgcctaccacg
cagcgaggacgcatcgtgaggctaccaccaatactagccatcaactgcgggggaccacac
gaaaaagcatattggatgaaaggcaaccagaaagatgtgccagaagtggttagaaggggt
ggcagcagtaaaccatgtcggtacggtttacattgcgccaggcctggatgcagattcaag
catcctgacagaccggcatccgcatcggcgtcgtctaggcgaagcgaggcgcgcgacacg
cactgtgtgttaccgcataggctgatgatccggctgcaagctgatggggacgttatcatc
aatgataagactgaacagtcgcctaccgagcctcacacgcctcgaaataagccggacaaa
cacaaaaagccggtgaccacgcagtcggaagaagagtataccttacaagcggcagttgtg
tgtgtagaagacaaccctaagaatctggtcgcgtacgtccaaactaacaaagaggacgcc
cagtggcacctgtttaacgatttaagtatcgtcccggtgagtgaagaggaagtgttccaa
ttcggtacctggtggaagactccatgcgtgttgttctattccaccctggcagcgagggtg
accccgcctgaggaggctgtgccctcatag
DBGET
integrated database retrieval system
