Otolemur garnettii (small-eared galago): 100941760
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Entry
100941760 CDS
T07855
Symbol
COL9A1
Name
(RefSeq) collagen alpha-1(IX) chain isoform X1
KO
K08131
collagen type IX alpha
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga04151
PI3K-Akt signaling pathway
oga04510
Focal adhesion
oga04512
ECM-receptor interaction
oga04820
Cytoskeleton in muscle cells
oga04974
Protein digestion and absorption
oga05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100941760 (COL9A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100941760 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100941760 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100941760 (COL9A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100941760 (COL9A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
100941760 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oga00535
]
100941760 (COL9A1)
Proteoglycans [BR:
oga00535
]
Extracellular matrix (ECM) proteoglycans
Others
100941760 (COL9A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Laminin_G_3
Laminin_G_2
DUF4882
Motif
Other DBs
NCBI-GeneID:
100941760
NCBI-ProteinID:
XP_012660519
Ensembl:
ENSOGAG00000002670
LinkDB
All DBs
Position
Unknown
AA seq
921 aa
AA seq
DB search
MKTCWKIPVFFFVCSFVGPWASATVKRRPRFPVNSNSNGGNELCPKIRIGQDDLPGFDLI
SQFQVEKEASRRAIQRVVGSTGLQVAYKLGNNVDFRIPTRHLYPSGLPEEYSFLTTFRIT
GSTLEKSWNIWQIQDSSGKEQVGIKINGQTKSVAFSYKGLDGSLQTAAFSNLPSLFDAQW
HKIMIGVERSTATLFVDCNRIESLPIKPRGPIDVDGFAVLGKLADNPQVSVPFELQWMLI
HCDPLRPRRETCHELPARITPSQTTDERGPPGEQGPPGPPGPPGVPGIDGIDGDRGPKGP
PGLPGPVGEPGKPGAPGKPGTPGADGLTGPDGAPGSVGPRGQKGEPGVPGPRGFPGRGIP
GPPGPPGTAGLPGELGRVGPVGDPGRRGPPGPPGPPGPSGTIGFHDGDPLCPNSCPPARS
GYPGIPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGARGPPGAQGLRGITGIVGDK
GEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAQGPRGIPGSPGPKGDTGLP
GVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGTTGAPGKPGQL
GNSGKPGQQGPAGEVGPRGPRGLPGNRGEVGPTGAPGLPGKLGPLGNPGLPGLPGPPGLP
GMKGDRGVVGEPGPKGEQGASGEEGEAGGRGELGDEGLPGPKGSVGNPGEPGLRGPEGVR
GLPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPGRAPTDQHIKQVCMRVMQEHFAEMAAS
LKRPDSGVSGLPGKPGPPGPPGPPGENGFPGQMGIRGLPGIKGPPGPLGLKGPKGDLGEK
GERGPPGRGPKGLPGATGLPGDPGPASYGRNGRDGEPGPPGVAGIPGVPGPPGPPGLPGF
CEPASCTVQAGQRAFSKGPDP
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgtgctggaaaattccagttttcttctttgtgtgcagtttcgtgggaccctgg
gcatctgcaactgtcaagcggcgcccaagattccctgtcaattcaaattctaatggtgga
aatgaactctgtccaaagatcagaattggccaagatgacttaccagggtttgacctgatt
tctcagttccaggtagagaaagaggcctctagaagagctatccagagggtggtggggtcc
actggactgcaggtggcttacaagctgggaaataatgtagactttaggattccaaccagg
catttataccccagtggactgcctgaagaatactcctttttaactacttttcggataact
ggaagcacacttgaaaagagctggaacatttggcagattcaggattcctcggggaaggag
caagttggcataaagattaacggccaaacaaaatctgtcgcgttttcatacaaaggcctg
gacggaagtctccagaccgcagccttctccaatttgccctccttgtttgatgcccagtgg
cataagatcatgatcggcgtggaaaggagtactgctactctttttgttgactgcaacagg
attgaatccttacctataaagccaaggggcccaatcgatgtcgatggctttgctgtgttg
ggaaaacttgcagataatcctcaagtttctgttccatttgaacttcaatggatgctgatt
cattgcgaccccctgcgaccccggagagaaacttgccatgagctgccagccagaataaca
cccagccagaccaccgatgagagaggtcccccgggcgagcagggtccccccgggccacca
gggccccctggcgttcccggcattgatggcatcgatggtgaccgaggcccaaagggtccc
ccaggcctcccgggtcctgtgggagagccgggcaagccaggagctccgggcaagccgggc
acgccgggcgctgacggtttaacaggacctgatggagcccctggctctgttggaccaagg
ggacagaaaggagaacctggtgtacctggacctcgtgggtttccaggtcgtggtattcct
ggaccccctggtcctcctgggacagcaggactccctggagagctaggccgcgtgggacct
gttggtgaccctgggagaagaggaccacctggccccccaggccccccaggacctagtgga
acaattggctttcatgacggagatccactgtgccccaattcctgcccacccgctcgctca
ggatatccaggcataccaggcatgaggggtcataaaggggctaaaggagaaattggcgaa
ccaggaagacaaggacacaagggtgaagaaggtgaccagggagaactgggagaggttgga
gctcgaggacctccaggagctcaaggtttgagaggcatcaccggcatagtgggggataaa
ggggaaaagggtgctcgaggcttagatggagaacctgggcctcagggccttcctggtgca
cctggggatcagggacagcgagggcctccgggagaagcaggtcccaagggagacagaggg
gctcaagggcctagaggaattcctggctccccagggcccaaaggagacacgggcttgccc
ggtgtggatggccgtgacgggatacctggaatgcctggaacgaagggtgaaccagggaaa
cctgggcctcctggcgatgcaggattgcaggggttaccaggtgtacctggaatccctggc
gccaagggtgttgccggtgaaaagggtactacaggtgctccggggaagcctggtcagctg
ggaaattcaggcaaaccgggccaacaggggcctgcaggagaggtgggaccccgaggaccc
cggggacttcctggcaacagaggagaagtaggacccacaggagccccaggcctgccaggt
aaactgggtcctctgggtaaccctggcctcccaggcttgcccgggcctcctggacttcct
ggaatgaaaggtgacaggggtgtagttggtgaacccggtccaaagggtgaacagggtgcc
tcaggagaagaaggtgaagcaggtggaaggggtgaacttggagatgaaggattacctggc
ccaaagggatctgtgggtaaccctggggagcctggcttgaggggacctgaaggagttcgg
gggcttcctggagtagaaggccccagaggaccacctggaccccgaggcgtgcagggagaa
cagggtgccactggcctgcccggtgtgcaaggccctccgggccgagcacccaccgatcag
cacatcaagcaggtctgcatgagagtcatgcaagagcattttgctgagatggctgctagt
ctcaagcgtcccgactcgggggtctctggcctcccggggaagcctggccctcctggtccc
cccggcccccctggagagaacggtttcccaggtcagatgggaattcgtggccttccaggc
attaaaggaccccctggacctcttggtttgaaaggaccgaaaggtgacttgggagaaaag
ggagagcgtggccctccaggaagaggtcctaaaggtttgcctggagctacaggtcttccg
ggtgaccctggccctgccagctatgggagaaatggccgggacggtgagccaggccccccc
ggggtggcaggaattcctggtgtgcccgggcccccaggaccgcccggccttcccggtttc
tgtgagccagcctcctgcaccgtgcaggctggtcagcgagccttcagcaaagggcctgac
ccctga
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integrated database retrieval system
