KEGG   Otolemur garnettii (small-eared galago): 100946710
Entry
100946710         CDS       T07855                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
oga  Otolemur garnettii (small-eared galago)
Pathway
oga03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:oga00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    100946710 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oga03400]
    100946710 (TDP1)
DNA repair and recombination proteins [BR:oga03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     100946710 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho RMMBL
Other DBs
NCBI-GeneID: 100946710
NCBI-ProteinID: XP_023367284
Ensembl: ENSOGAG00000006613
LinkDB
Position
Unknown
AA seq 608 aa
MSQEGDYGKWTISSSDESEDEKPKLDKPSTSFLSHAGQEATNEPRYTCSEARKAAQRRKI
SPVKFNNTDSGSPPKRQRSDSQEYLGWCLSSSDDELQPETPEKQAKKVIVKEEEDISVPQ
DGTAQRTGNHSTPACHRLKEEEDEYETSGEGQDIWDMLDKGNPFQFYLTRVSGIKPKYNS
GALHIKDILSPLFGTLVSSAQFNYCFDVDWLIKQYPPEFRKKPILLVHGDKREAKADLHA
QAKPYGNISLCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLIHEDWHQKTQGIWLSP
LYPRIVHGTHKSGESVTHFKADLISYLMAYNASPLKEWIDLIHEHDLSETNVYLISSTPG
RFQGSQKDNWGHFRLRKLLKEHASSIPAAESWPIVGQFSSIGSLGADESKWLSSEFKESL
LTLGKESKAPGKSTVPLHLIYPSVENVRTSLEGYPAGGSLPYGIQTAEKQNWLHSYFHKW
SAETSGRSHAMPHIKTYMRPSPDFSKIAWFLVTSANLSKAAWGALEKNGAQLMIRSYELG
VLFLPSAFGLDSFKVKQKFFSANKEPMATFPVPYDLPPELYGNKDRPWIWNIPYVKAPDT
HGNMWVPS
NT seq 1827 nt   +upstreamnt  +downstreamnt
atgtctcaggagggtgattatggaaagtggacaatatccagtagtgatgaaagcgaggat
gaaaagccaaagctggacaagccatctacctcttttctctcccatgctgggcaggaagca
acaaatgaaccaagatacacctgttccgaggcccggaaggctgcacaaaggaggaaaata
tcccctgtgaaattcaacaatacagattcaggatcacctcccaaaaggcagagaagtgac
tctcaggagtacctaggctggtgtctctccagcagtgatgatgagctacaaccagaaacg
ccagagaagcaggctaagaaagtgatagtcaaagaggaggaagacatttctgtcccccag
gatggcactgcccaaagaactggaaatcatagcactcctgcctgtcataggctcaaagag
gaggaagatgaatacgaaacatcaggggaaggccaggatatttgggacatgttggataaa
gggaatcccttccagttttaccttactagagtctcaggaattaagccaaagtacaactcg
ggagcccttcacatcaaggatattttgtctcctctatttgggacacttgtttcttcagct
cagtttaactactgctttgacgtggactggcttataaaacagtatccaccagagttcagg
aagaaaccaatcctgcttgtgcacggcgataaacgagaagctaaagctgatttgcacgcc
caggcaaagccttacggaaacatttccctctgccaggcaaagttggatattgcatttgga
acacaccacacgaaaatgatgctactgctctatgaagaaggcctccgggttgtcatacac
acctccaacctcatccatgaggactggcaccagaaaacacaagggatatggttgagcccc
ttatacccacgaattgtccatggaacccacaaatctggagaatcagtaacacattttaaa
gctgatctcatcagttacttaatggcttataatgcttctcctctcaaggagtggatagac
ctcatccacgaacatgatctctctgaaacaaatgtttaccttattagttcaaccccagga
cgcttccaaggaagtcaaaaggataactggggacattttagactcagaaagcttctgaaa
gaacatgcctcatccattcctgcagcagagtcctggcccatagtaggtcagttttcaagc
attggttccttgggggctgatgagtcaaaatggttaagttctgagttcaaagagagcttg
ctgacgctagggaaggaaagcaaggctccgggaaaaagcaccgttcctcttcatttgatc
tatccttctgtggaaaatgtgcggaccagcttagaaggctatcctgctgggggctctctt
ccctatggcatccagacagctgaaaaacagaattggctgcattcctattttcacaaatgg
tcagctgagacgtctggccgcagccatgctatgccacatattaagacatatatgagacct
tctccagacttcagtaaaattgcttggttccttgtcacaagcgcaaatctgtccaaggct
gcttggggagctttggagaagaatggcgcccagctaatgatccgctcctatgagcttgga
gtccttttcctcccttcagcatttggccttgacagtttcaaagtgaaacagaaattcttc
tctgccaacaaggagccgatggccaccttccctgtgccgtatgatcttcctccagaacta
tatggaaataaagatcggccatggatatggaacattccttatgtgaaagcaccagataca
catgggaacatgtgggtgccttcctga

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