Otolemur garnettii (small-eared galago): 100951884
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Entry
100951884 CDS
T07855
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100951884 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oga03019
]
100951884 (CNOT1)
Messenger RNA biogenesis [BR:
oga03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100951884 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100951884 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
100951884
NCBI-ProteinID:
XP_012662291
Ensembl:
ENSOGAG00000000543
LinkDB
All DBs
Position
Unknown
AA seq
2383 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGVAKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE
LDHPGFQIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLINPEIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMASL
SIGGSAAPHTQNMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG
LGTSSLAGIGTGTLGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYSLAGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIA
AHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRTASPQQREMMDQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLSQPTGFLAQPMKQAWATDDVAQIYDKCITELE
QHLHAIPPALAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTEMCVEISYRA
QAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGV
LLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPG
FVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYK
GTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVD
MLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNLQ
LINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQ
LRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNP
AFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaatcggcacggt
cctgaggcagacaggcatttattacgctgcctattttcgcatgtggatttcagtggcgat
ggtaaaagcagtggcaaagatttccatcagacccagtttctgattcaggagtgtgcgtcg
ctgattacaaagccaaattttatctcgacgctgtcctatgccattgataatccattgcac
tatcagaagagtttaaagcctgcacctcatttatttgcccagctgagtaaagtgctcaag
ttaagcaaagtacaagaggtaatttttggccttgccctgttgaattcttctagttcagat
ctcagaggttttgctgcccagtttatcaaacagaagcttccagatcttctgcgttcttac
attgacgcagacgtcagtggaaatcaagaaggtggcttccaggatatagcaatagaggtc
ctacacctcctcctctcccatctcctctttgggcagaagggagcctttggagttggacag
gaacagatagacgcttttctcaagacactgcgcagagattttccccaagaacgctgtcct
gtggtgcttgcaccacttttataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggaggggtagctaaaaccatgatggagagctctttggctgatttcatgcaa
gaagtaggctatggcttttgtgcaagtattgaagaatgtcgcaatataatcatgcagttt
ggtgttcgggaggtcacagctgcccaggttgcaagggttttgggaatgatggctcgaact
cattcaggattaacagatggtattccattacagagtatctctgctcctggcagtggtatc
tggagtgacggaaaagataaaagtgatggagcacaggcacacacgtggaatgttgaagtt
ttgattgatgttcttaaagaactgaacccgagtttgaatttcaaggaagtaacttatgaa
ctggaccatcctggatttcaaattcgtgacagtaaaggacttcataatgtagtttatggc
attcagaggggtttgggtatggaagtgttcccagtagacctcatatatagaccttggaaa
catgcagaaggccagctctccttcattcagcattcccttataaatccagaaatcttctgt
tttgcggattatccctgtcatactgttgccactgatattctgaaagcaccaccagaggat
gacaatcgagaaattgccacatggaagagcttggatttgattgaatctctgctgaggctt
gcagaggttgggcagtatgaacaggtcaaacagctcttcagcttccctatcaaacactgt
ccagacatgctggtattggccttactacaaatcaacacctcctggcataccttgcgccat
gaactcatctccactctgatgccaattttccttggaaaccatcctaactcagctattatt
ttgcactatgcatggcatgggcagggacagtctccctcaattcgccaacttatcatgcat
gccatggcagaatggtacatgagaggggagcagtatgatcaggccaaattatctcgaata
cttgatgtggcccaggacttgaaggccttgtcaatgctgctaaatggtactccttttgcc
tttgtgattgaccttgctgcacttgcttcacgtcgtgaatacctcaaacttgacaagtgg
ctcacggataagattcgagagcatggggagccttttatacaagcatgtatgactttttta
aagagacggtgcccttctatattgggtggacttgctccagagaaagaccagcccaaaagt
gctcaacttcctccagaaactctggccacaatgttggcctgtctacaggcttgtgcaggg
agtgtttctcaggagttatcagagaccattctcaccatggtagccaattgcagtaatgtt
atgaataaggccagacagccaccacctggagttatgccaaaaggacgccctcccagtgct
agcagcttagatgccatttctcctgttcagattgacccacttgctggaatggcatctctt
agtataggtggttcagcagcccctcacactcagaatatgcagggttttcctccaaatttg
ggttctgcattcagtacccctcagtcaccagcaaaagcatttccacccctttcaacccca
aatcagacaacagctttcagtggtattggaggactttcatcacagcttccagtaggtggt
cttggcacaagcagcctggctggtataggaactgggactcttggactccctgctgtgaat
aacgacccttttgtacagaggaaactgggcacctctggactgaaccagcctacattccag
cagagtaagatgaaaccttcggacttgtctcaggtgtggccagaggcaaaccagcacttt
agtaaagagatagatgatgaagcaaacagctatttccagcgaatatataatcacccacca
catccaaccatgtctgttgatgaggtattagaaatgctgcagagatttaaagactctact
ataaagagggaacgagaagtatttaactgtatgctaaggaatttgtttgaagaatatcgg
ttttttcctcagtaccccgataaagaattacatataacagcctgcctatttggtgggata
attgaaaaaggactggtcacttacatggcactgggtctggccctgcgatatgttcttgaa
gccttacgcaagccttttgggtccaaaatgtattactttgggattgctgcactagataga
tttaaaaatagattgaaggactatccccagtattgtcagcatttggcgtctatcagtcac
tttatgcaatttccgcatcatttacaggaatatattgagtatggacaacagtctagagat
cctcctgtgaaaatgcaaggctctatcacaacccctggaagtattgcactggctcaggcc
caggctcaggcccaggttccagcaaaagctcctcttgctggtcaggttagcacaatggta
accacctcaacgaccaccactgttgctaaaacggttacagtcactaggccaactggagtc
agctttaagaaagatgtgccaccttctattaatactacaaatatagatacgttgcttgtg
gccacagatcaaactgagagaattgtggaacccccagaaaacatccaagagaaaattgct
tttatctttaataatctttcacaatcaaatatgactcaaaaggttgaagagttaaaggag
actgtgaaagaagaatttatgccttgggtctcacagtatctggttatgaagagagtcagt
attgagccaaactttcacagcctgtattcaaacttccttgatacactaaagaatcctgaa
tttaacaagatggttctgaatgagacctacagaaacatcaaagtgctcctgacctctgat
aaagctgcagccaatttctcagatcgttctttgctgaagaacttgggacattggttagga
atgatcacattagctaaaaataaacccatcttacacactgacttggatgtgaaatctttg
ctgctagaggcttatgttaaaggacaacaagaattgctctatgtagtgccctttgttgcc
aaagtcttagagtctagcattcgtagtgtggtttttaggccaccaaacccttggacaatg
gcaattatgaatgtattagctgagctacatcaggaacatgacttgaagttaaatttaaag
tttgagattgaggtcctctgcaagaaccttgcgttagacatcaatgagctaaaacctgga
aacctcctcaaggataaagatcgcctaaagaatttagatgagcaactctctgctccaaag
aaagatgtcaagcagccagaagaactccccccaattacaaccacaacaacttctactaca
ccagctaccagtaccacctgtacagccacagttccaccacagccacagtacagctaccat
gacatcaatgtgtattcccttgcaggcctggcaccacacattactctaaacccaacaatt
cccttgtttcaggcccacccacagttgaaacagtgcgtgcgtcaagcaattgaacgggcc
gtccaagagctagttcatcctgtagtggatcgatcaattaagattgccatgactacttgt
gaacaaatagtcaggaaggattttgccctggattctgaggaatctcgaatgcgaatagca
gctcatcatatgatgcgtaacttgacagctggaatggctatgattacttgcagggaacct
ttgctcatgagtatatctacaaacctgaaaaatagttttgcctcagcccttcgcactgct
tccccacaacaaagagaaatgatggatcaggcagcagcccagttagctcaggacaattgt
gaattagcttgctgttttattcagaagactgcagtagaaaaagcaggccctgagatggac
aagagattagcaactgaatttgaactgagaaaacacgccaggcaagaagggcgcagatac
tgtgatcctgttgtattaacctatcaagctgagcggatgccagaacaaatcaggctgaaa
gttggcggtgtggacccaaagcagctagctgtttatgaagagtttgcacgcaatgtacct
ggctttttgcctacgaatgacttaagtcagcctacaggatttttagctcagcccatgaag
caagcttgggcaacagatgatgtagcacagatttatgataagtgcattacagaactggag
cagcacctacatgccatcccaccagctttagccatgaaccctcaagctcaggctcttcga
agtcttttggaggttgtagtattatctcgaaactctcgggatgccatagctgctcttgga
ttgctccagaaggctgtagagggcttgctagatgccacaagtggtgctgatgctgaccta
ctgctgcgctacagggaatgccacctcttggtcctaaaagctctgcaggatggccgggca
tatgggtctccatggtgcaacaaacagatcacaaggtgcctaattgaatgtcgagatgaa
tataagtataatgtggaggcagtggagttgctaattcgcaatcatttggttaatatgcag
cagtatgatcttcacctagctcagtcaatggagaatggtttaaactacatggctgtggca
tttgctatgcaattggtaaaaatcctgctggtggatgaaaggagtgttgcccatgttacc
gaggcagatctctttcatactattgaaaccctcatgaggattaatgctcattccagaggc
aatgctccagaaggattgccccagctgatggaagtagtgcgatccaactatgaagcaatg
attgatcgtgctcatggaggccctaactttatgatgcattctgggatctctcaagcctca
gagtacgatgaccctccaggcctgagggagaaggcagagtatcttctgagggaatgggtg
aatctctaccattcagcagctgctggccgtgacagtaccaaagctttctctgcgtttgtt
ggacaggtagagcttttggaaagaaagatgcaccagcaaggaatactgaagactgacgat
ctcataacaaggttctttcgtctgtgtactgaaatgtgtgttgaaatcagttaccgtgct
caggctgaacagcagcataatcctgctgctaatcctaccatgatccgagccaagtgctat
cacaacctggatgcctttgttcgactcattgcattgctagtgaaacactcaggggaggcc
accaacactgtcacaaagataaatctgctgaacaaggtccttggtatagtagtaggagtt
ctcctacaggatcatgatgttcggcaaagtgaatttcagcagcttccctaccatcgaatt
tttatcatgctgctcttggaactcaatgcacctgagcatgtgttagaaaccattaacttc
cagacacttacagctttctgcaatacattccacatcttgaggcctaccaaagctcctggc
tttgtatatgcctggcttgaactgatctctcatcggatatttattgcaagaatgctggca
catacgccacagcagaagggatggcctatgtatgcacagctactgattgatttattcaaa
tatttagcacctttccttagaaacgtggagctcactaaacctatgcaaatcctctataag
ggcactttaagagtgctgctggttcttttgcatgatttcccagagttcctttgtgattac
cattatgggttctgtgatgtgatcccacctaattgtatccagttaagaaatttgatcctg
agtgccttcccaagaaacatgaggctcccagacccattcactcctaatctgaaggtggac
atgttgagtgaaattaacattgcaccccggattctcaccaatttcactggagtgatgcca
cctcagttcaaaaaggatttggattcctatcttaaaactcgatcgccagtcacttttctg
tctgacctgcgcagcaacctacaggtatctaacgagcctggcaatcgctacaacctccag
ctcatcaatgcactggtgctctatgtaggaactcaggccattgcgcacatccacaataag
ggcagcacaccttcaatgagcactatcacccactcagcacacatggatatcttccagaac
ctggctgtggatttggacactgagggtcggtacctcttcttgaatgcaattgcaaaccag
ctgcggtacccaaatagccacactcactacttcagctgcaccatgctgtacctttttgca
gaggccaacactgaagctatccaggaacagatcacaagggttctcttagaacggttgatt
gtaaataggccacatccttggggccttcttattaccttcattgagctgattaaaaatcca
gcgtttaagttctggaaccacgagtttgtacactgtgccccagaaatcgaaaagttattc
cagtcagttgcacaatgctgcatgggacagaagcaggctcagcaagtaatggaagggacg
ggtgccagttag
DBGET
integrated database retrieval system
