Otolemur garnettii (small-eared galago): 100958039
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Entry
100958039 CDS
T07855
Symbol
TPR
Name
(RefSeq) nucleoprotein TPR
KO
K09291
nucleoprotein TPR
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga03013
Nucleocytoplasmic transport
oga05014
Amyotrophic lateral sclerosis
oga05200
Pathways in cancer
oga05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100958039 (TPR)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100958039 (TPR)
09162 Cancer: specific types
05216 Thyroid cancer
100958039 (TPR)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100958039 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oga03019
]
100958039 (TPR)
Messenger RNA biogenesis [BR:
oga03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100958039 (TPR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Seryl_tRNA_N
Imm70
FAM25
Motif
Other DBs
NCBI-GeneID:
100958039
NCBI-ProteinID:
XP_012658027
Ensembl:
ENSOGAG00000001609
LinkDB
All DBs
Position
Unknown
AA seq
2282 aa
AA seq
DB search
MAAVLQQVLERAELNKLPKSVQNKLEKFLADQQSEIDGLKGRHEKFKVESEQQYFEIEKR
LSHSQERLVNETRECQSLRLELEKLSTQLKAVTEKNKELEIAQDRNVAIQSQYTRTKEEL
EAEKRDLIRTNERLSQELEYLTEDVKRLNEKLKESNTTKGELQLKLDELQASDVSVKYRE
KRLEQEKELLHNQNTWLNTELKTKTDELLALGREKGNEILELKCNLENKKEEVSRLEEQM
NGLKTSNEHLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIKLSNLYKSAADDSEAKS
NELTRAVDELHKLLKEAGEANKAIQDHLLELEESKDQMEKEMFEKIGKLEKELENANDLL
SATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVETQDQLLLEKLENKRIN
KYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVKLEQAMKEIQRFQEDTDKANKHSS
VLERDNQRMEIQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISSSSEVISQHLVSY
RNIEELQQQNQRLLVALRELGETREREEQETTSSKITELQLKLESALTELEQLRESRQHQ
MQLVDSIVRQRDMYRILLSQQLEKLQEQVTDLRSQNTKISTQLDFASKRYEMLQDNVEGY
RREITSLHERNQKLTATTQKQEQIINTMTQDLKGANEKLAVAEVRAENLKKEKEMLKLSE
VRLSQQRESLLAEQRGQNLLLTNLQTIQGILERSETETKQRLSSQIEKLEHEISHLKKKL
ENEVEQRHTLTRNLDVQLLDTKRQLDTETNLHLNTKELLKNAQKEIATLKQHLSNMEVQL
ASQSSQRTGKGQPNDKDDVDDLLSQLRQTEEQVNDLKERLKTSTSNVEQYRAMVTSLEES
LNKEKQVTEEVHKNIEVRLKESAEFQTQLEKKLMEVEKEKQELQDDKRKAIESMEQQLSE
LKKTLSSVQNEVQEALQRASTALSNEQQARRDCQEQAKIAVEAQNKYERELMLHAADVEA
LQAAKEQVSKMASVRHHLEETTQKAESQLLECKASWEERERMLKDEVSKCISRCEDLEKQ
NRLLHDQIEKLSDKVVASIKEGVQGPLNVSLSEEGKSQEQILEILRFIRREKEIAETRFE
VAQVESLRYRQRVELLERELQELQDSLNAEREKVQVTAKTMAQHEELMKKTETMNVVMET
NKMLREEKERLEQDLQQMQAKVRKLELDILPLQEANAELSEKSGMLQAEKKLLEEDVKRW
KARNQHLLSQQKDPDTEEYRKLLSEKEVHTKRIQQLTEEVGRLKAEIARANASLTNNQNL
IQSLKEDLNKVRTEKENIQKDLDAKIIDIQEKVKTITQVKKIGRRYKTQYEELKAQQDKA
METSAQSSGDHQEQHVSVQEMQELKETLNQAETKSKSLESQVENLQKTLSEKEIEARNFQ
EQTMQLQSELARLRQDLQDRTTQEEQLRQQITEKEEKTRKAIVAAKSKIAHLAGVKDQLT
KENEELKQRNGALDQQKDELDVRMTALKSQYEGRISRLERELREHQERHLEQRDEPQEPS
NKVPEQQRQITLKTTPASGERGIASTSDPPTANIKPTPVVSTPSKVTAAAMAGNKPTPRA
SIRPMVTPATVTNPTTTPTATVMPTQVELQEAMQSEGPVEHVPVFGSTSGSVRSTSPNVQ
PSLSQPILTVQQQIQATAFVQPTQQTHAQIEPANQELSPNILEVVQSSPVERPSTSTAVF
GTVSATPSSSLPKRTREEEEDSTIEASDQVSDDTVEMPLPKKLKSVTPVGTEEEVMAEES
TDGEVETQAYNQDSQDSIGEGVTQGDYTPMEDSEETSQSLQIDLGPLQSDQQTTSSQDGQ
GKGDDVIVIDSDDEEEDDDDNDGEHEDYEEDEEDDDDDDDTGMGDEGEDSNEGTGSADGN
DGYEADDAEGGDGTDPGTETEESMGGGEGNQRAADSQNSGEGNTESSFSQEVSREQQPSS
ASERQTPRAPQSPRRPPHPLPPRLTIHAPPQELGPPVQRIQMSRRQSVGRGLQLTPGIGG
MQQHFFDDEDRTVPSTPTLVVPHRTDGFAEAIHSPQVAGVPRFRFGPPEDMPQTSSSHSD
LGQLASQGGLGMYETPLFLAHEEESGGRSVPTTPLQVAAPVTVFTESTTSDASEHASQSV
PMVTTSTGTLSTTNETATGDDGDEVFVEAESEGISSEAGLEIDSQQEEEPVQVSDESDLP
STSQDPPSSSSVDTSSSQPKPFRRVRLQTTLRQGVRGRQFNRQRGVSHAMGSRGGINRGN
IN
NT seq
6849 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtattgcagcaagtcctggagcgcgcggagctcaacaagctgcctaagtcc
gtccagaacaaacttgaaaagttccttgctgatcagcaatccgagatcgatggcctgaag
gggaggcatgagaaatttaaggtggagagcgaacaacagtactttgagatagagaagaga
ctgtcccatagtcaggagagacttgtgaatgaaacccgagaatgccagagcttgcgactt
gagctagagaaactcagcactcagctgaaggctgtaactgagaaaaacaaagaacttgaa
attgctcaggatcgcaatgttgccattcagagccaatatacaagaacaaaggaagaacta
gaagctgagaaaagagacttaattcgaaccaatgaaagactgtctcaagaacttgaatat
ttaacagaggatgttaaacgtctaaatgagaaacttaaagaaagcaatacaacaaagggt
gaacttcaattaaaattggatgaacttcaagcatctgatgtttctgttaagtatcgagaa
aaacgcttagaacaagaaaaggaattgctacataatcagaatacgtggctaaatacagag
ttgaaaaccaaaactgatgaacttctagctctcggaagagaaaaaggaaatgagattcta
gagcttaaatgtaatcttgaaaacaaaaaggaggaggtgtccagactagaagaacagatg
aatggcttaaaaacgtcaaatgaacatcttcaaaaacacgtggaggatctgttgaccaaa
ttaaaagaggccaaggaacaacaggccagtatggaagagaaattccacaatgaattaaat
gctcacataaaactctctaacttatacaagagtgctgccgatgactctgaggcaaagagc
aatgagctgacccgggcagtggatgaactacacaaacttttgaaagaagctggagaagca
aacaaagcaattcaagatcatcttttagagctggaagaatctaaagatcaaatggaaaaa
gaaatgtttgagaaaatagggaaattggagaaggaattagagaatgcaaatgacctgctt
tctgctacaaaacgtaaaggagccatattatcagaagaagaacttgcagctatgtctcct
actgcagcagctgtagcgaaaatagtaaaacctggcatgaaattaacagagctgtataat
gcttatgtggaaactcaggatcagttgctcttggagaaactagagaacaaaagaattaat
aagtatctagatgaaatagtgaaagaagttgaagccaaagcaccgattctgaaacgccaa
cgggaggagtatgaacgtgcccagaaagctgtggcaagtttatctgttaagctcgaacaa
gctatgaaggagattcagcgatttcaggaggacactgataaagccaacaaacattcatct
gtacttgagagagacaatcaaagaatggaaatacaaataaaagatctttcacaacagatt
agagtgcttttgatggaacttgaagaagcaaggggcaaccatgtaattcgtgatgaggaa
gtaagctctgctgatataagtagttcgtctgaagtaatatcacagcatctagtatcttac
agaaatatcgaagaacttcaacaacaaaatcagcgtctcttagtggctcttagagaactt
ggagaaaccagagaaagagaagaacaagaaacaacttcatctaaaataactgagcttcag
ctcaaacttgagagcgctctcactgaactggagcaactccgtgagtcgcgacaacatcaa
atgcagcttgttgattccatcgttcgtcagcgtgacatgtaccgtattttattgtcacaa
caacttgagaaacttcaggagcaagttacagatttgcggtcacaaaataccaaaatttca
acccagctagattttgcttctaaacgttatgaaatgctacaagataatgttgaaggatat
cgtcgagaaataacatcattacatgagcgaaatcaaaaactcacagcaacgactcaaaag
caggaacagatcatcaatacaatgactcaggatttgaaaggagcaaatgaaaagctagct
gttgcagaagtaagagcagaaaatttgaagaaggaaaaggaaatgcttaaattgtcagaa
gtccgtctttctcagcaaagagagtctttgttagctgaacaaagggggcaaaacttgctg
ctaactaatctgcaaaccattcagggaatattagagagatctgaaactgaaaccaaacaa
aggcttagtagccagatagaaaaattggaacatgagatctctcatctaaagaagaagttg
gaaaatgaggtggaacaaaggcatacactcactagaaacctggatgttcaacttttagat
acaaagagacaactagatactgagacaaatcttcatcttaacacaaaggaactattaaaa
aatgctcaaaaagaaattgctacattgaaacagcacctcagtaatatggaagtccaactt
gcttctcagtcttcacagagaactggtaaaggtcagcctaatgataaagatgatgtggac
gatcttctgagtcagctaaggcaaacagaagagcaggtgaatgacttgaaagagagactc
aaaacaagtactagtaatgtagagcagtatcgggcaatggttactagtttggaagagtcc
ctgaacaaggaaaaacaggtgacggaagaagtacataagaatattgaagttcgtttaaaa
gagtcagctgagtttcagacacagttggaaaagaagttgatggaagtagagaaggaaaaa
caagaacttcaagatgataagcgaaaagccatagagagcatggaacaacagttatctgag
ttgaagaaaacactctctagtgttcaaaatgaagtacaagaggctcttcagagagcaagc
acagctttaagtaatgaacagcaagccagacgtgactgtcaggagcaagctaaaatagct
gtggaagctcagaataaatatgaaagggaattgatgttgcatgcagctgatgttgaagct
ctacaagctgccaaggaacaggtttcaaaaatggcatcagtgcgtcaccatttggaagaa
acaacccagaaagcagaatcacagttgttagagtgtaaagcatcttgggaggaaagagag
agaatgttgaaggatgaagtttctaagtgtatttctcgctgtgaagatctggagaaacaa
aacagattacttcatgatcagattgaaaaattaagtgacaaagtagttgcctctataaag
gaaggtgtacaaggtccattgaatgtatctctcagtgaagaaggaaaatctcaagaacaa
atcttagaaattctcagatttatacgaagagaaaaagaaattgctgaaactaggtttgag
gtggctcaggttgagagtctacgttaccgacaaagggttgaacttttagaaagagagcta
caagaactgcaagatagtctaaatgctgaaagggagaaagtccaggtgactgcaaaaaca
atggctcagcatgaagaactgatgaagaaaacagaaacaatgaatgtcgttatggagacc
aataagatgctaagggaagaaaaggaaagactggaacaggatctacagcagatgcaagca
aaggtgagaaaactggagttagatattctgcctttacaagaagcgaatgctgagctgagt
gagaaaagtgggatgttgcaggcagagaagaaattattagaagaggacgttaaacgctgg
aaagcacgtaaccagcatctactaagtcaacagaaagatccagatacagaagaatatcgg
aagctactttctgaaaaagaagttcatactaagcgtattcagcagttgactgaagaagtt
ggaaggcttaaagctgaaattgcaagagcaaatgcatctttgaccaacaaccagaactta
attcagagtctaaaggaagatttaaataaagtaagaactgaaaaggaaaatatccagaag
gacttagatgccaaaataattgatatccaagaaaaagtcaaaactattactcaagtcaag
aaaattggacgtaggtacaagacgcaatatgaagaactaaaggcccaacaagataaggcc
atggagacgtctgctcagtcttctggagaccatcaggagcagcatgtctcagtccaggaa
atgcaggagctcaaagaaaccctcaaccaagctgaaacaaagtcaaaatcacttgagagt
caagtagagaatctgcagaagacattgtctgaaaaagagatagaagcaagaaattttcaa
gaacagactatgcaacttcagtccgaacttgcaaggcttcgtcaggatcttcaggataga
accacacaggaggagcagctccggcagcagataactgaaaaggaagaaaaaacacgaaag
gctattgtagcagcaaaatcaaaaattgcacacttagctggtgtaaaagatcaactaact
aaagaaaacgaagagcttaagcaaaggaatggagccttagatcaacagaaagatgaactg
gatgttcgaatgactgctcttaagtcccaatatgaaggtcgaattagtcgtttggaaaga
gaactcagggagcaccaagagagacaccttgaacagagagatgagcctcaggaaccttct
aataaggttccagaacagcagagacagatcaccctgaaaacaactccagcttctggtgaa
agaggaattgccagcacatcagacccaccaacagccaacatcaagccaactcctgttgtt
tctactccaagtaaagtgacagctgcagctatggctggaaataaaccaacgcccagggct
agtatccgcccaatggttacacctgcaactgtaacaaatcccactactaccccaacagct
acagtgatgcccacacaagtggaattacaagaagctatgcagtcagaaggacccgtggaa
catgttccggtttttggaagcacaagtggatctgttcggtcaactagccctaacgtccag
ccttcgctctctcaacccattctaactgttcagcagcaaatacaggctacagcttttgtg
caacccactcaacagactcatgctcagattgagcctgccaatcaagagttatcaccaaac
atactagaggttgttcagagttctccagttgaacggccttctacttccacagcagtattt
ggcactgtttcagctaccccaagttcttctttgccaaagcgtacacgtgaagaagaagag
gatagcaccatagaagcatcagaccaagtctctgatgacacagtggaaatgcctcttcct
aagaagttgaaaagtgttacacctgtaggaactgaggaagaagttatggcagaagaaagt
actgatggagaggtagagactcaagcatacaaccaagattctcaagattccattggagaa
ggagtcacccagggagattatacacctatggaagacagtgaagaaacctctcagtctctg
caaatagatcttggaccacttcagtcagaccagcaaacaacttcatcccaggatggtcaa
ggcaaaggcgatgatgtcattgtaattgacagtgatgatgaggaagaggatgatgatgac
aatgatggagaacatgaggattatgaggaagatgaggaagatgatgatgacgacgacgac
acagggatgggagacgagggtgaagatagcaatgaaggaactggaagtgcagatggcaat
gatggatatgaagctgatgatgctgagggtggtgatggaactgatccaggtacagaaaca
gaagaaagcatgggtggaggtgaaggtaatcagagagctgctgattctcagaacagtggt
gaaggaaatacagaatcctctttttcccaggaggtctctagagaacagcagccatcatca
gcatctgaaagacagacccctcgagcccctcagtcaccaagacgcccaccacaccctctt
cctccacgactgaccattcatgctccacctcaggagttggggccaccagttcagagaatt
cagatgtcccggaggcagtctgtaggacgtgggcttcagttgactcctggaataggtggc
atgcagcagcatttttttgatgatgaagacagaacagttccaagtaccccaactcttgtg
gtgccacatcgtactgatggatttgctgaagcaattcattcccctcaggttgctggtgtt
cctagattccggtttgggccacctgaagacatgccccaaacaagttctagtcattctgat
cttggtcagcttgcttctcaaggaggtttaggaatgtatgaaacacccctcttcctagct
catgaggaagagtcaggtggccgaagtgttcccactactcctctacaagtggcagcccca
gtgactgtatttactgagagtaccacctctgatgcttcagagcatgcctctcagtctgtt
ccaatggtgacaacctctactggcactttatctacaacaaatgaaacagcaacaggtgat
gatggagacgaagtatttgtggaagcagaatccgaaggcattagttcagaagcaggccta
gaaattgatagccagcaggaagaagagcctgttcaggtgtctgatgagtctgatctccct
tctaccagccaagatcctccttccagctcttctgtagatactagcagcagtcaaccgaag
ccttttagacgagtgagacttcagacaacattgagacaaggcgtccgtggtcgtcagttt
aacagacagagaggtgtgagccatgcaatgggaagtagaggaggaataaatagaggaaat
attaattaa
DBGET
integrated database retrieval system