Oryza glaberrima (African rice): 127763764
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Entry
127763764 CDS
T08853
Name
(RefSeq) transcription factor SPEECHLESS-like
KO
K20558
transcription factor SPEECHLESS
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
127763764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogl03000
]
127763764
Transcription factors [BR:
ogl03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
127763764
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GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Mesd
Motif
Other DBs
NCBI-GeneID:
127763764
NCBI-ProteinID:
XP_052144517
UniProt:
I1NZ49
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Position
2:complement(8855274..8859083)
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AA seq
416 aa
AA seq
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MADGGSGGLCELFSDDHRDIRHVADADLFRILETWEECINGGAGGGGGGVSLAGVADQGA
AAASTGAGGGARMTTTTTAANGRRREGRDEEKGGGGGGGPPAQKKQKGSSSSSSSPAALA
AAVGDGDGAAKMSHITVERNRRKQMNEHLAVLRSLMPCFYVKRGDQASIIGGVVDYIKEL
QQVLRSLEAKKNRKAYADQVLSPRPSPAAAALMVKPTPPISPRFAAAAAAGVPISPRTPT
PGSPYNKHAAAAAAAARPPHPAAATSSCSVAYSMSPAMTPTSSSSTTTTTTHELSPAPAF
LPILDSLVTELAARGGASCRPLVIPSSAAAIAGIVGVPDVRVEFAGPNLVLKTVSHRAPG
QALKIIAALESLSLEILHVSICTVDDATVLSFTIKIGIECELSAEELVQEIQQTFL
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggcggcagcggcggcctgtgcgagctcttctccgacgaccaccgcgacatc
cgccacgtcgcggacgccgacctgttccgcatcctcgagacgtgggaggagtgcatcaat
ggcggcgccggcggcggaggcggtggggtttctttagctggtgtggctgatcagggagcc
gctgcggccagcaccggcgccggcggtggtgcaaggatgacgacgacgacgaccgccgcg
aacggtcggcggcgggagggccgcgacgaggagaaaggaggcggcggtggcggtggtcct
ccggcgcagaagaagcaaaaggggtcgtcgtcgtcgtcgtcgtctccggcggcgttggcg
gcggcggtgggggacggcgatggtgcggcgaagatgtcgcacatcacggtggagcgcaac
cggaggaagcagatgaacgagcacctcgccgtcctgcgctcgctcatgccatgcttctac
gtcaagaggggagatcaggcgtcaatcataggaggggtggtggattacatcaaggagctt
cagcaagtgcttcgctcgctggaggccaagaagaatcggaaggcctatgccgaccaggtg
ctcagcccgcggccgtcgccggcggcggcggcgctcatggtcaagcccacgccgccgatc
agcccgcggttcgccgccgccgccgccgccggggtgccgatcagcccacggacgccgacc
ccgggaagcccgtacaacaagcatgccgccgccgccgccgccgccgctcgcccgccgcac
ccggcggccgcgacgtcgtcgtgctcggtggcgtacagcatgtcgccggccatgacgccc
acgtcgtcctcgtcgacgacgacgacgacgacgcacgagctctcgccggcgccggcgttc
ctgcccatcctcgacagcctcgtcaccgagctcgctgcccgcggcggcgccagctgcagg
ccgctggtcatcccctcctccgccgccgccatcgccggcatcgtcggcgtccccgacgtg
agggtggagttcgccgggccgaacctggtgctgaagacggtgtcgcaccgcgcgccgggt
caggcgctcaagatcatcgccgctctggagagcctctcgctcgagatcctccacgtcagc
atctgcaccgtcgacgacgccaccgtcctctccttcaccatcaagattgggatcgagtgc
gagctgagtgcagaggagctggtgcaagaaattcagcaaactttcttgtga
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