Oryza glaberrima (African rice): 127766915
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Entry
127766915 CDS
T08853
Name
(RefSeq) meiotic recombination protein SPO11-1 isoform X1
KO
K10878
meiotic recombination protein SPO11
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogl03036
]
127766915
Chromosome and associated proteins [BR:
ogl03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
127766915
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Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
Motif
Other DBs
NCBI-GeneID:
127766915
NCBI-ProteinID:
XP_052148052
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Position
3:30464433..30468351
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AA seq
381 aa
AA seq
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MAGREKRRRVAALDGEERRRRQEEAATLLHRIRGLVRWVVAEVAAGRSPTVALHRYQNYC
SSASAAAASPCACSYDVPVGTDVLSLLHRGSHASRLNVLLRVLLVVQQLLQQNKHCSKRD
IYYMYPSIFQEQAVVDRAINDICVLFKCSRHNLNVVPVAKGLVMGWIRFLEGEKEVYCIT
NVNAAFSIPVSIEAIKDVVSVADYILIVEKETVFQRLANDKFCERNRCIVITGRGYPDIP
TRRFLRYLVEQLHLPVYCLVDADPYGFDILATYKFGSLQLAYDANFLRVPDIRWLGVFTS
DFEDYRLPDCCLLHLSSEDRRKAEGILSRCYLHREAPQWRLELEAMLQKGVKFEIEALSA
CSISFLSEEYIPKKIKQGRHI
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggcggggagggagaagaggcggcgggtggcggcgctcgacggcgaagagcggcggcgg
cggcaggaggaagcggcgaccctcctccacaggatcagagggttggtgcgctgggtcgtc
gccgaggtcgccgctggccgctccccgaccgtcgcgctccaccgctaccagaactactgc
tcctccgcctccgccgccgccgcgtccccatgcgcctgcagctacgacgtccccgtgggc
acagatgtactctcgctcctccaccggggctcccacgcctcccggctcaatgtgctcctc
agggttcttctcgtcgtgcagcaactcctgcagcagaacaagcactgctccaagagggac
atctactacatgtacccctccatattccaagaacaagcggttgttgaccgtgcgatcaat
gatatatgcgtactcttcaagtgcagccggcacaatctcaatgtggttcctgtggcaaaa
ggcttggtgatgggctggattagatttttagagggagaaaaggaagtctattgcataacg
aatgtcaatgctgccttctctatcccagttagcatcgaagcaataaaagatgttgttagt
gttgcggactacatacttattgtcgagaaggagacagtgtttcaacgtttggctaatgac
aagttctgtgaaaggaatcgctgcattgtgattacaggaagaggctacccagatattcca
acaagaagattcttgcgctaccttgttgaacagctgcatttgccagtttactgtttggtg
gatgcagacccttatggtttcgacattctggctacctacaaatttggttcactgcaattg
gcatacgatgcaaatttcctgcgtgtgcctgatattcggtggcttggggtcttcacatct
gattttgaggattatcgccttccagactgctgcctacttcacttgtcgtctgaagacaga
aggaaagctgaaggaattctctcaaggtgttacttgcacagggaagccccacaatggagg
ttggagttagaagccatgttgcaaaagggtgtcaaatttgagattgaggcgttatctgca
tgttccatttcctttttatcagaagagtacattcccaagaagatcaaacaaggaagacat
atataa
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