Oryza glaberrima (African rice): 127772798
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Entry
127772798 CDS
T08853
Name
(RefSeq) LOW QUALITY PROTEIN: endoglucanase 15-like
KO
K01179
endoglucanase [EC:
3.2.1.4
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00500
Starch and sucrose metabolism
ogl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
127772798
Enzymes [BR:
ogl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.4 cellulase
127772798
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_9
CBM49
Motif
Other DBs
NCBI-GeneID:
127772798
NCBI-ProteinID:
XP_052154736
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Position
5:complement(6116319..6119254)
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AA seq
721 aa
AA seq
DB search
MDKTCHFVGGCNLPRTSSVACIWNNICHQQLAKVXKGPXSSVNYFSCFESLALSDLPSTP
VVYKKHSFELPPSQANQSPLLLHSASHSLTLLAHCKSVMANGAATLFGFLALASMVKLGF
VAGGGHDYAMALRKSILYFEAQRSGVLPPNQRVSWRASSGLFDGKANGVDLVGGYYDAGD
NVKFGLPMAFTVTMMSWSILEYGKQMAAAGELRNAMDAVKWGTDYFIKAHPEPDVLYGEV
GDGDTDHSCWQRPEDMTTSRQAFRVDPQHPGSDLAAETAAAMAAASIVFRGTYPGYANLL
LVHSKQLFEFADKYRGKYDASITVARNYYGSFSGYGDELLWAAAWLFEATEDRSYLEYLA
GNGDALGGTGWSINQFGWDVKYPGVQVLAAKFLLQGRAGDHAAALQRYRQNAEFFVCSCV
GKGAVNVARTPGGMMYHQRWNNLQFVTSASFLLTVYADFASISGRGAVRCPAGAAQPFDI
LKFVKSQVNYILGDNPRGTSYMVGYGASYPRQVHHRGASIVSIKRDPSFVSCQEGYSSWY
GRQAGNPNLLDGAVVGGPDEYDDFADERDNYEQTEAATYNNAPLLGVLARLAASCGGLKE
EEYEQETATPVMNRTSSSSSSLPATAIAIEQNVTRTWARRRRTYYRYAVTVTNRSQRKTV
RELHLGVSGLQGRLWGLEEARYGYVPPRWLPALRPGRSLRFTYVQPAPAPANVWVTGYKL
V
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaacttgccattttgtaggaggatgtaacctacctaggacttcatcagtcgca
tgcatttggaataatatttgccatcaacaacttgctaaagtgtgaaaggggccatagagt
tcagtaaactatttctcatgctttgaatcccttgctttatctgatcttccctccactcca
gtggtatataagaagcactcttttgagctccctccaagccaagccaaccaaagtcctctg
ctccttcactctgcttcacactcactcaccttgttggctcattgcaaatctgtaatggcc
aatggggcagccacattgtttggtttcttggcacttgcatcaatggtgaagcttggattt
gttgctggtggtggccatgactatgccatggcattgaggaagagcatcctctacttcgag
gcgcagcggtccggcgttctccctcctaaccagagggtctcctggagagccagctctggc
ctctttgatggaaaggccaatggagttgatcttgttggaggttattatgatgcaggggac
aatgtcaagtttgggttgccaatggcgttcacggtgaccatgatgtcgtggagcatatta
gagtacggcaagcagatggcggcggcgggcgagctccggaacgccatggacgccgtcaag
tggggcaccgactacttcatcaaggcgcacccggagcccgacgtgctgtacggcgaggtc
ggcgacggcgacaccgaccacagctgctggcagcggccggaggacatgacgacgagccgc
caggcgttccgcgtcgacccacagcaccccgggtcagacctcgccgccgagaccgccgcc
gccatggccgcggcgtccatcgtcttccgcggcacgtacccgggctacgccaacctcctc
ctcgtgcactccaagcagctgttcgagttcgccgacaagtaccggggcaagtacgacgcc
agcatcacggtggcgcgaaactactacggctccttcagcggatacggggacgagctgctg
tgggcggcggcgtggctgttcgaggcgacggaggacaggtcctacctggagtacctcgcc
ggcaacggcgacgcgctgggcgggacggggtggtccatcaaccagttcgggtgggacgtc
aagtaccccggcgtgcaggtcctcgccgccaagttcctcctccagggccgcgccggtgac
cacgccgccgcgctgcagaggtacaggcagaacgccgagttcttcgtgtgctcctgcgtc
ggcaagggcgccgtcaacgtcgccaggacccccggcggcatgatgtaccaccagaggtgg
aacaacctccagttcgtcaccagcgcctccttcctcctcaccgtctacgccgacttcgcc
tccatctccggccgcggcgccgtccgctgccccgccggcgccgcccaacccttcgacatc
ctcaaattcgtcaaatctcaggtgaattatattttgggtgataatccgaggggcacgagc
tacatggtggggtacggcgcgagctacccgcggcaggtgcaccaccgcggcgcgtccatc
gtgtccatcaagagggacccgtcgttcgtgagctgccaggaggggtactcgtcgtggtac
ggaaggcaggccggcaacccgaacctgctcgacggcgccgtcgtcggcgggcccgacgag
tacgacgacttcgccgacgagcgcgacaactacgagcagacggaggccgccacctacaac
aacgcgccgctgctcggcgtcctcgcccgcctcgccgcctcctgcggcggcctcaaggag
gaggaatacgaacaagaaacggcgactccggtcatgaaccggacgtcgtcgtcgtcgtcg
tcgctgccggcgacggcgatcgcgatcgagcagaacgtgacgaggacatgggcgaggagg
cggaggacgtactaccggtacgcggtgacggtgacgaacaggtcgcagaggaagacggtg
agggagctgcacctgggcgtgtcggggctacaggggaggctgtgggggctggaggaggcg
aggtacgggtacgtgccgccgaggtggctgccggcgctgcggccggggaggagcctcagg
ttcacgtacgtgcagccggcgccggcgccggcgaacgtgtgggtcaccggctacaaactg
gtctga
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