Oryza glaberrima (African rice): 127783296
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Entry
127783296 CDS
T08853
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00040
Pentose and glucuronate interconversions
ogl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
127783296
Enzymes [BR:
ogl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
127783296
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
127783296
NCBI-ProteinID:
XP_052166503
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Position
8:9303616..9305002
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AA seq
383 aa
AA seq
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MANRNVPMLLPLAVLFLLGSGGVATAANVIDRCWRGQRNWAADRQRLAVCSVGFAGKMRQ
NRGAGVVAYTVTDPSDDPVRPRPGTLRYGATVLPAKVWITFARDMRIRLAQPLYVKNFTT
IDGRGADVHVAGGAGIVLYHARDVIVHGLHVHDCRAQPPGRVVVPGGAVQPSGSGDGDAI
RLVASSKVWIDHNTLSRCEDGLLDVTVGSTDVTVSNNWFHDHDKVMLLGHDDGFTTDRRM
RVTVAFNRFGPNVNQRMPRIRHGYAHVVNNLYDGWRDYAIGGSMGPSVKSQGNLFAASGG
GGDNKKVTRRMPAVARGGGGGKDQWHLHSVGDAFENGAFFRQVGNRVRPNYNRHQAFSAA
SAGDVRALTGGVGALTCFATAAC
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggccaaccgcaatgtaccaatgcttctgcccctcgccgtcctcttcctcctcggcagc
ggcggcgtcgccaccgccgcgaacgtgatcgaccggtgctggcgcggccagcgcaactgg
gccgccgaccggcagcgtctggccgtgtgctcggtgggcttcgccggcaagatgcggcag
aaccgcggcgccggcgtggtcgcctacacggtcaccgacccgagcgacgaccccgtccgg
ccgcggcccggcacgctccggtacggcgcgacggtgctgccggcgaaggtgtggatcacc
ttcgcgcgcgacatgcgcatcaggctggcgcagccgctgtacgtcaagaacttcaccacc
atcgacggccgcggcgccgacgtgcacgtcgccggcggggccggcatcgtgctgtaccac
gcgagggacgtgatcgtccacggcctccacgtgcacgactgccgcgcgcagccgccggga
cgggtggtcgtcccgggtggcgccgtgcagccctccggcagcggcgacggcgacgccatc
cgcctggtggcgagctccaaggtgtggatcgatcacaacacgctgtcccgctgcgaggac
ggcctgctcgacgtcacggtcggctccaccgacgtcaccgtctccaacaactggttccac
gaccacgacaaggtgatgctcctcggccacgacgacggcttcaccaccgaccgccgcatg
cgcgtcaccgtcgccttcaaccgcttcggcccaaacgtcaaccagcgcatgccaaggata
aggcacgggtacgcgcacgtggtgaacaacctgtacgatgggtggagggactacgccatt
ggagggagcatggggccgagcgtgaagagccagggcaacctgttcgcggcgtcgggcggc
ggcggcgacaacaagaaggtgacgaggaggatgccggccgtggcgcgtggcggcggcggc
gggaaggatcagtggcacttgcactcggtcggcgacgccttcgagaacggcgcgttcttc
cggcaggtgggcaacagggtgcgccccaactacaatcggcaccaggccttctcggcggcg
agcgccggcgacgtaagggcgctcaccggcggcgtcggcgctctcacgtgctttgccacg
gcggcgtgctga
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