Oncorhynchus gorbuscha (pink salmon): 123990628
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Entry
123990628 CDS
T07892
Symbol
crnkl1
Name
(RefSeq) crooked neck-like protein 1 isoform X1
KO
K12869
crooked neck
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123990628 (crnkl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
123990628 (crnkl1)
03036 Chromosome and associated proteins [BR:
ogo03036
]
123990628 (crnkl1)
Spliceosome [BR:
ogo03041
]
Complex B
Other components
Prp19-related factors
123990628 (crnkl1)
Complex C
123990628 (crnkl1)
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
123990628 (crnkl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
HAT
TPR_14
Suf
TPR_19
TPR_CcmH_CycH
TPR_16
U3_assoc_6
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
123990628
NCBI-ProteinID:
XP_046147225
LinkDB
All DBs
Position
LG12:17856550..17864186
Genome browser
AA seq
711 aa
AA seq
DB search
MASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPKQKITDEEELND
YKLKKRKGFEDNIRKNRTVISNWIKYAQWEESLKEVQRARSIYERALDVDHRNIALWLKY
AEMEMKNRQVNHARNIWDRAITILPRVNQFWYKYSYMEEMLGNIAGCRQVFERWTEWEPE
EQAWHSYINFELRYKEVDKARSIYERFVIVHPDVKNWIKYARFEEKHGYIAHGRKVFERS
VEFFGEEHVDENLFVAFARFEEKQKEFERVRVIYKYALDRIPKQQAQELFKFYTVFEKKF
GDRRGIEDVIVSKRRFQYEEEVKASPHNYDAWFDYLRLVESDADPDTAREVYERAIANIP
PIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYLACLDLIPHKKFTFAKMWLLYGQF
EIRQKNLQAARQGLGTAIGKCPKNKLFKGYIELELQLREFDRCRKLYEKYLEFASENCTT
WIKFSELETILGDTERARAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEYDNTRGLYKRL
LQRTQHVKVWISYAQYELSIDTSDRLQRCRGIFEEANKGLRSCEEKEERLMLLESWKEFE
QEFGSDTTRERVKKLLPEKVKKRRKLTAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMA
KMWKRQQQEEDDEEDDEEDEEENNGEVDRGKVEEVRAKKWREKKTEEGREE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcatctactgcggcagggaaacagaggataccgaaagtagcgaaggtgaaaaacaaa
gctcctgcagaggtacaaatcacagctgagcagttgctcagggaggcaaaggagagggag
ctcgagcttctgccaccgccacccaagcaaaagatcactgatgaagaggagttgaacgat
tacaagttgaagaagaggaagggatttgaagacaacatcagaaagaaccgtactgttatc
agcaactggataaaatacgctcaatgggaggagagcctgaaagaagtccagagggctcgc
tctatttacgagcgtgctctggatgtagaccaccgaaatatagctctgtggctgaagtat
gccgagatggagatgaagaaccggcaggtgaaccacgcccgcaacatctgggacagagcc
atcaccatcttgccccgtgtcaaccagttctggtacaaatacagttacatggaagagatg
ctgggcaacatcgctggctgcagacaggtgtttgagcgctggacagagtgggaaccagag
gaacaagcctggcactcctacatcaactttgagctgcgctacaaggaagtcgacaaggcc
cgctccatctatgagagatttgtgattgtccaccctgatgtgaagaattggattaagtac
gcccgttttgaagagaagcatggctacatcgcccatggaaggaaggtgtttgaaagatca
gtggagttctttggcgaggagcatgttgatgagaacctctttgtggcctttgccagattt
gaagagaaacagaaagagtttgagagagttcgagtcatctacaaatacgccctggacaga
attcccaaacagcaggctcaggagcttttcaagttctacactgtgtttgagaagaagttt
ggagaccggagggggatcgaggacgtcatcgtcagcaaaaggagatttcagtatgaagag
gaagtcaaggcaagcccacacaattatgacgcatggtttgattacctacgcctggtggag
agtgacgcggatcctgacactgccagggaggtctatgagagagccatcgccaatatccct
cctatacaggagaagagacactggagaagatacatttacctgtggataaactatgctcta
tatgaagaactggaggtcaaggacccagagagaacaaggcaggtgtacctggcatgtctg
gatctcatccctcacaaaaagttcacgtttgccaagatgtggctactctacggacagttt
gaaatccgccagaagaacctccaagctgctagacaaggcttgggcacagctattggtaaa
tgtccaaagaacaagctgtttaagggctacattgaactggagctgcagctcagagagttt
gaccgatgtaggaagctttatgagaagtacctggagtttgcctccgagaactgcaccacc
tggatcaaattctctgagctggagaccatcctgggagacacagagagagcccgggccatc
ttcgagctggccatcggacagccacgactggacatgccagaggtgttgtggaagtcctac
atcgactttgaaatcgagcaggaagagtatgacaacaccagaggtctctacaagagactg
ttgcagcgcacacagcacgtcaaggtctggatcagctatgcccagtatgagctgtccata
gatacctctgaccggctgcagaggtgtagggggatctttgaggaggccaacaagggcctg
aggagctgtgaggagaaggaggagcgtctgatgctgctggagtcttggaaggagtttgag
caggagtttggctcagacacaaccagggaaagggtgaagaaactgctgccggagaaggtg
aagaagaggagaaagctcacggcagaggacgggtcagatgcagggtgggaggagtactac
gactacatcttccctgaggatgcagcgaaccagcccaacctcaagctgcttgccatggcc
aagatgtggaagaggcagcaacaagaagaagatgatgaagaagacgatgaagaggatgag
gaagaaaacaatggagaagtggataggggtaaagtggaggaagttagggcaaagaaatgg
agggagaagaaaacggaagaggggagagaggaatag
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