Oncorhynchus gorbuscha (pink salmon): 123990814
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Entry
123990814 CDS
T07892
Symbol
tnfrsf21
Name
(RefSeq) tumor necrosis factor receptor superfamily member 21
KO
K05157
tumor necrosis factor receptor superfamily member 21
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
123990814 (tnfrsf21)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ogo04050
]
123990814 (tnfrsf21)
04090 CD molecules [BR:
ogo04090
]
123990814 (tnfrsf21)
Cytokine receptors [BR:
ogo04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
123990814 (tnfrsf21)
CD molecules [BR:
ogo04090
]
Proteins
123990814 (tnfrsf21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
DUF8096
CARD
DUF1451
Motif
Other DBs
NCBI-GeneID:
123990814
NCBI-ProteinID:
XP_046147653
LinkDB
All DBs
Position
LG12:27937306..27990363
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AA seq
667 aa
AA seq
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MRSSQTFAQNWKMSVLCMSVALLYSVVGEASSQPLTPSPGTEIVALSARHYYHTDQSTGS
QLVCDKCPAGTFVSRHCNQTNVRECSRCGEGTFTRGENGVQQCHRCRRPCRAPLIEKFTC
TATMDRVCNCPPDTFAKGDTCTPHFLCPVGSGVKKRGSEVEDVSCKVCTRGSFSDVVSSV
LRCRTHTDCLAQGLPLLAAGTRETDNICGPASPNSPTLPGPAQSTFIQEPSYSSAGPVHK
DAFSLTAGSEVLELLLSTTATLPSSGNSQDSTAAGSYEASHKDGEVLNLATTAGAQDPTQ
TPPHLKHSVPSEHRRTHPAANKRAMDGVEDGSEVGVGQGVQRSGYRPTRRGSPRPSTHTH
FDINEHLPWMIVLLLLLVLVVIVVCSVKRSSRVLKKGPVQDPSSIIEKAIQKKTCPPTQT
KEKWIYYSNGQGVDILKLVAAQIGSQWIDMYQSLANATEREVAAFSNGYQSDHDRAYAAL
QHWTIRDGDANLAKLINALHRHRRIDVVEKIRGVMEDNPQFDLNQLMTAVNVTPSHSPVH
KPLDSPRMLVEQSPVHRIKGFFPDESEPLLRCDSTSSKDSALSRTGSFITKEKKDTVLRQ
VRLDRCDLQPIFDDMLHILNPDELHVIEEIPMAEDKLDRLFEIAGVKSQEASQTLLDSVY
SHLPDLL
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgagaagtagccaaacatttgctcagaactggaaaatgtcagtgctctgtatgtctgtg
gcgctactgtacagtgtggttggtgaggcctctagccagcctctgacacccagccctggc
actgagatagtggccctgtctgcccgccactactaccacacagaccaaagcacgggcagt
caactggtctgtgacaagtgccccgcaggaactttcgtgtccaggcactgcaaccagacc
aacgtgagggagtgcagccgctgtggcgagggcacattcacgcgcggagagaacggggtt
cagcaatgccaccgctgcaggaggccctgccgtgcccccctcattgagaagttcacctgc
acggccaccatggaccgggtctgcaactgccccccggacaccttcgccaagggggacacc
tgcactccccacttcctgtgccctgtgggctcaggggtgaagaaaaggggcagcgaggtg
gaggatgtgagctgtaaggtgtgcacgcgagggagcttctcggatgtggtttccagtgta
ttgaggtgcaggacacacacagactgtctggcccagggtctgcccctactggcagcaggc
accagagagacagacaacatctgtggacctgcttctcccaactctcccaccctcccggga
cctgcacagtctaccttcatccaggagccctcctattcctcagctggcccagtacacaaa
gatgccttcagcctgacagcaggttctgaggtcttagagctcttactgagtaccacggcg
actctacccagctccggcaacagccaggactccaccgcagcaggctcctacgaggccagc
cacaaagatggagaggtgctgaacctggccactactgccggagcccaggaccccacacag
actccaccacacctcaagcactctgtgcccagtgagcaccgccgcacccacccagcagcc
aacaagcgggccatggacggcgtagaggatggatcggaggtaggggtaggtcagggtgtg
caaagatcagggtacaggcccacgcgaaggggctcccccaggcccagcactcatacacac
tttgacatcaacgagcacttgccctggatgatcgtgctgctgctgctgctggtgctggtg
gtgatcgtggtgtgcagcgtgaagaggagttccagagtgctgaagaagggaccggttcag
gaccccagcagcatcattgagaaagctatccagaagaagacctgccccccgacacagacc
aaggagaagtggatctactactccaacggacagggtgtggacatcctgaagttggtggca
gctcagattggcagccagtggatcgacatgtaccagtccctggccaatgccacagagcgt
gaggtggcagccttctccaatggctaccagtcggaccacgaccgggcatacgctgccctg
caacactggaccatccgcgacggggacgctaacctggccaagctcatcaacgccctgcac
cgccaccgccgcatcgatgtggtggagaagatacggggcgtcatggaagacaatcctcag
tttgatctgaaccagctgatgaccgctgtgaatgtaaccccgagccacagtcctgtccac
aagcctttggattctcctaggatgctggtggagcagtctcctgtgcaccggatcaagggt
ttcttccccgatgaatcagagccccttctccgctgtgactccacctccagcaaagactcc
gccctcagcaggaccggctcgttcattaccaaagagaagaaagacacggtgctacgtcag
gtccggctggaccggtgcgacctgcaacccatcttcgacgacatgctgcacatcctaaac
cctgacgagctgcacgtcatcgaggagatccccatggccgaggacaaactggaccgcctc
tttgagattgccggggtcaagagccaggaggccagccagaccctgctggactcggtctac
agccacttgcctgacctactatag
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