Oncorhynchus gorbuscha (pink salmon): 123997296
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Entry
123997296 CDS
T07892
Name
(RefSeq) PHD finger protein 1-like
KO
K11467
PHD finger protein 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
123997296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
123997296
03036 Chromosome and associated proteins [BR:
ogo03036
]
123997296
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
123997296
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
123997296
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_2
PHD
Mtf2_C
PHD_ash2p_like
PHD_2
Chromo
ASH2L-like_WH
DUF4537
Motif
Other DBs
NCBI-GeneID:
123997296
NCBI-ProteinID:
XP_046157400
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All DBs
Position
LG15:63169695..63182065
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AA seq
518 aa
AA seq
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MGGVSEGDDVLARWSDGLLYLGNVKRVDGVKQCCLVRFEDNSEFWVLRKDIHSFSVGVEE
VCCICDAPPLKEPLINCLKCRHGYHPECHTPSIEPEADSNSWICRQCVFAVATKRGGAIK
RGRFARLMQIMKLRLPYQLSSLDWDPQHLTNQQQCYCYCAGPGEWNLKMLQCGSCGQWFH
EACTQCLTKPLLYGDRFYEFQCSVCANGPETIQRLPMSWVDLAHLVLYHLSLCCKRKYFD
FDHEIMSFANENWDSLLLGSLSDTPRQDRCHNLLNALNSNKDRFVSGKEIKKKKCLFGLQ
VRAPPPLTSDSSPLITDPPINITQRRSPLSLPCQRRAVGPESRKSKRRIMETQPCPPPVP
ATPIDLVPCCHGYVGGTNLYNSRKEEELNLGSPPKRMFALYHPTYNGAPAISRTLHHYSA
EDPCRVLPPCLPFSLSSSHHHHHNNQQHHQHQPGQKLDPCPSLMLRDVPSYPGGVGGGGD
GSAARGWGGGDGVRILARRVTPDGKVQYLVEWGNVSVY
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggggggagtaagtgaaggggatgatgtgttagctcgatggagtgatggactactgtac
ctcggcaatgtgaaaagagtagatggagtcaagcagtgttgtctggtgagatttgaggac
aactcggaattctgggtcctaagaaaagatattcactctttctcagttggagtggaagaa
gtttgctgtatctgtgatgctccgcctcttaaagaacctctcatcaattgtcttaaatgt
cgtcatggttatcatccggagtgccacactccgtccattgagccggaagctgacagcaat
tcttggatatgtcggcaatgtgtctttgcagtggcaaccaagagagggggagccatcaaa
cgaggacggtttgcccggctcatgcaaatcatgaaacttcggctgccctatcagctgtca
tctttagactgggacccacagcatctgaccaaccagcagcagtgttactgctactgtgcc
ggacctggagagtggaacctgaaaatgttgcagtgtggaagttgcggtcagtggtttcat
gaagcttgcacacagtgtctgaccaagccgttgttatacggagacaggttttatgagttc
cagtgctcagtctgtgcaaacggacccgagacaattcaacggctacccatgagctgggta
gatttggcccatttggtgctctaccacctctccttgtgctgcaagagaaaatactttgat
ttcgaccatgaaatcatgtcgtttgccaatgagaattgggactctttgcttctaggctcg
ctctctgacacaccaaggcaagatcgctgtcacaatctgctcaacgctttgaactccaac
aaagacaggtttgtctctggtaaagagatcaagaagaagaagtgtctttttgggctccag
gtccgagctccgcctcccctgacctctgattcgtcccccctcatcactgacccgcccatc
aacattacccaaaggagaagcccattgtcactgccctgccagaggagagcggtggggcca
gagtcacgcaaatcaaagcggcgcatcatggagacacagccttgtccgcccccggtccca
gccaccccaatagatctggtgccatgttgccatggctacgtaggtggaactaacctctac
aactccaggaaggaggaggagctgaatttgggctctccacctaagaggatgtttgccctg
tatcaccccacatataacggagccccagccatctctagaaccctgcatcactatagtgcg
gaagacccttgtcgagtgctgcccccctgcctccccttctccctgtcatcctcccaccat
caccaccacaacaaccagcagcaccaccagcaccagcctggccagaagttggatccgtgc
ccctccctcatgctgcgtgatgttccttcctatccgggcggcgtggggggtgggggggat
gggtcagctgcaaggggctgggggggcggggacggggtgaggattttggcgaggcgagta
acgccagacgggaaggtccagtacctcgtggagtgggggaacgtgagtgtgtactga
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