Oncorhynchus gorbuscha (pink salmon): 123998868
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Entry
123998868 CDS
T07892
Name
(RefSeq) bromodomain and WD repeat-containing protein 3-like isoform X1
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
123998868
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
123998868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_DCAF12
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_Nup120_160
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
123998868
NCBI-ProteinID:
XP_046160042
LinkDB
All DBs
Position
LG16:complement(69684185..69704729)
Genome browser
AA seq
1674 aa
AA seq
DB search
MAEEQCSQIEAELYYLIARFLQSGPCKKSAQILVEELEEYELIPKRWSWDGKQYKRNFQD
WVILNQHIPADYLVRVCQQIGPLIDKEAPPSVPGVQTLLGLGRQSLLRTAKSCTHTEWSG
TAVAALHRGRPPEPPVSFGKPPSIVSIMGARQATGTARFGHALPSYTYQHMKMHRRILGH
LSSVYCVAFDRSGRRIFTGSDDCLVKIWSTDDGRLLSTLRGHAAEISDMAVNYENTLIAS
ASCDKVIRVWCLRTCAPITVLQGHAASITSIQFCPAVKGPMRFLASTGADGMVCLWQWHS
LSMKFVDRPVKFIERSRPGVQISTSSFSCGGMFLATGGTDHVIRVYYLGSETPMKLSELD
AHMDKVVVVQFCNNSNSLRFVSGSRDGTARIWHYQQQEWKSISLDIATRLPGSAVVNGED
KTKLVPTMVAWDRGDRTVVTAVSNYLLKVWSSTTGQLLHVLSGHDDEVFVLEAHPFDRRI
MLSAGHDGNIYMWDLAKGAKIRNFFNMIEGQGHGAAFDCKFSADGQHFACTDSHGHLLIF
GFGCSRPYEKIPDQMFFHTDFRPLIRDANNFVLDEQTQQAPHLMPPPFLVDVDGNPHPTH
YQRLVPGRESCKEEHLVPQLGYMANGDGEVVEQVIGQLTADEGQGESPLDVLIRQLQNQP
DERRDQEREPEGEGAGERPEVVGSPPNMGLRRSGQVEGVRQMHHNAPRSQMATERDLLAW
SRRVVVNEVQQGVLRVMEETRRAKGEVECSIYNTERRRKPEPSSPKTEQQAPCKRSLRRT
QRKKKQTRPPPAYQTRSAGERRVNRGRISDSQMDSDSDGEAEEQAEASNASSDGETQWQS
DSSSSVSSSDYSDWTADAGINLQPPKRTSRRQVRPPGGSSSSEEAEGQGEEAGRKQAEEK
KKKPKQTKQKKPSSSLSLAGCDAEEWLPPSWIMETIPRRSPFVPQMGDELMYFRQGHQAY
VRAVHRAKAYSINPQKQPWNKLNLRDQESVKVVGIKYEVGPPTLCCLKLAFLHPISGKMT
NESFSLKYHDMPDVIDFLVLQQFYDEAKEHNWQTGVRFRSIIDDAWWFGSVEDQQPLQPE
YPDSLFQCYAVKWDNSEREKMSPWDMEPISDEAELPEEVGDGVVVTEEEVKARLYSPQEG
EWGAHSRDEDCQRVIFGINDLLTLDLAKAFASPVDLRDYPLYCTVVAYPTDLSTIHRRLE
NRFYRRISALMWEVRYIEHNARTFNEPQSPIVAAAKVVTDVLLRYIGDQSCTDILDLCHK
VKTELSSGEDETAEVDVDSDTPGTSTGQQRANPSPKKRGVVLDVRAWRGQCRELLRRMMD
GPDSEPFRQPVDLFTYPDYRDIIDTPMDLGTVTEALVVGNYENPMEFAKDVRLIFSNSKA
YTPNKKSQIYTMTLSQSAFFERQIISIISDYKSAVQNQRRRSRQSVSYRKRLNSGGSSPP
TSRPSSPKGKHKSGKKATPKKSQPSSKSLSRRPSQASESSSVVVEEDSQPSSSSSSGTGS
HIGGPGADRVTRSRTTPIKNSGITTQERNRPLTNGARQSHRRRVLQEGEESGGSKSSSSS
SSSSSLSSSDSDSDSESEVGKFVEGGDHDYSKAPCLKTRHKAKGKMDVSGKRRRKEEQEA
EEAPERAKRARVQAEDEEEEKDEEDDDEQDEDNEEEEEEEEPQPQPQTAERGGG
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaacagtgttcacaaatcgaagctgaattgtattacctcattgccagattt
ctccagtcgggaccgtgtaaaaaatcggcacagatcctggttgaggaactggaagagtat
gagttgatcccgaaacgatggagttgggacggcaaacaatacaaacgaaacttccaagac
tgggtgatcttgaaccagcacatcccagcagactacctggtgagagtatgccaacagatc
ggtcctctcatagacaaggaggccccacctagtgtccctggagtccagaccctcctgggc
ttgggaaggcagtctttgcttcgcacagctaaaagttgtacccacacagaatggagcgga
actgctgttgctgcgctgcaccggggtcgacccccagaaccaccagtcagctttgggaag
ccccccagcatcgtgtccatcatgggtgctcgccaggctactggcactgcccgcttcggc
catgccctgccgtcctacacctaccagcatatgaagatgcacaggcgcatcctgggccac
ctgtcctctgtgtactgtgtggccttcgaccgcagtggcagacggatatttacgggttct
gatgactgtctggtgaagatttggtccacggatgatggccggctgctgtccaccctgcgt
ggccatgcggccgagatctccgacatggcagtgaactacgagaacacgctcatagcctcg
gccagctgtgacaaggtcatccgagtgtggtgcctgcgcacctgcgctcccatcactgtg
ctgcagggccatgcagcctccatcacctctattcagttttgtccggcggtaaaaggaccg
atgcgcttcctggcctccactggcgcagacggcatggtgtgtttatggcaatggcactcg
ctcagcatgaagtttgttgaccggccagtcaagttcattgagcggtcaaggcctggggtc
cagatttccacctcctccttcagctgtggtgggatgttcctggccacgggcggtactgat
catgtgatcagggtgtattacctcggctctgaaacacccatgaagctgtctgagttggat
gctcacatggacaaagttgtggtggtccagttttgtaacaacagtaacagcctgaggttt
gtgagtggcagccgggacggcacggctaggatctggcattaccaacagcaggagtggaag
agcatttctctggacatagccaccagactaccagggagtgctgttgtgaatggcgaggac
aagaccaagctggtgccgacgatggtggcctgggaccgcggtgaccgcacggtcgtcaca
gcggtctctaattacctgctcaaagtgtggagctctaccacgggccagctgctgcatgtg
ctgtctggtcatgatgatgaggtgtttgtcttggaggcccacccatttgaccgccgcatc
atgctgtctgctggtcacgatggcaacatctacatgtgggacctcgccaagggagcgaag
atccgcaacttcttcaacatgattgagggccaaggccacggtgcagcgtttgactgtaag
ttctcagctgatggacagcactttgcctgcactgactcccatggccacctgctcatcttt
ggctttggatgcagcagaccctatgagaagattcctgaccagatgttcttccacactgac
ttccggcccctgatccgggacgccaataactttgtcctggatgagcaaacccagcaggcg
ccccacctcatgccccctcccttcttggtggacgtggacggtaacccccaccccacccac
taccagcgcctggtgcccggcagggagagctgcaaggaggaacatctggtgccccagctg
ggctacatggccaatggtgatggtgaggtggtggagcaggtgattggccagctaacagca
gatgagggtcagggagaaagcccattggatgtcctgatcagacagttgcaaaaccagccg
gatgagaggcgggaccaagagagagagcctgaaggagagggggctggtgagagaccagag
gtagtgggatcgccccctaacatgggcctgaggaggagtggtcaggtggagggggtgcgt
cagatgcaccacaatgcccctcgcagtcagatggccacggagagggacctgctggcctgg
agtaggagggttgtggtcaacgaagtccagcaaggggtcctccgggtgatggaagagacc
agacgggccaaaggtgaggtggagtgttccatctacaacacagagaggaggaggaagcct
gaacccagttctcctaagactgagcagcaggctccctgcaagcgctccctgcggcggacc
cagaggaagaagaagcagaccagacctccaccagcgtaccagacccgctcagcaggagaa
cgtcgtgtgaacagggggaggatctctgacagccagatggactcagacagcgatggagag
gcagaggagcaggcagaagccagcaacgcttcctctgatggggaaacgcagtggcagagt
gacagcagttccagtgtctcctccagtgactactctgattggacagctgatgcggggatc
aacctccagccccccaagcggaccagcagaaggcaggtccgaccgcccggtggctccagc
agttcagaggaggccgagggccagggagaggaggccggaaggaagcaggcggaggagaag
aagaagaagcccaagcagaccaaacagaagaaacctagctcgtctctgtctctggctggg
tgtgatgcggaggaatggctgcccccctcctggatcatggagaccatcccccgccgctct
ccttttgtgccacagatgggtgacgagctgatgtacttcaggcagggccaccaggcctac
gtcagggcagtgcacagggccaaggcctacagtatcaatcctcagaaacagccctggaac
aagctcaacctcagggaccaggagtctgtgaaggtggttggcattaagtatgaggtgggc
cctcccaccctctgttgcctaaaactggccttcctgcaccccatctcaggcaaaatgacc
aatgagtcattctccttaaagtaccatgacatgccggatgtcattgatttcctggtgctc
cagcagttctatgacgaagctaaagagcacaactggcagactggtgtgcgcttccggagc
atcatcgatgacgcctggtggtttggctcggtggaggaccaacagccactccagccagag
tacccagacagcctgttccagtgctacgctgtcaagtgggataatagcgagagggagaag
atgagcccttgggacatggagcccatttctgatgaagcggagttgccagaagaggttggt
gacggggtggtggtgacagaggaggaggtgaaggctcgcctctacagcccccaggagggg
gagtggggggctcactcacgggacgaggactgccagagggtcatctttggcatcaacgat
ctgcttacactggacctggccaaggcgtttgcttcacctgtggacctgcgggactacccc
ctctactgcactgtggtggcctaccccactgacctcagcaccatccacagacggctggag
aaccgcttctacaggaggatctcggctctgatgtgggaggtgcgctacatcgagcacaac
gcccgcactttcaatgagccccagagccccatcgtggcagcagccaaggtggtgactgat
gtgctcctccgctacatcggggatcagagctgcacagacatcttagatctgtgccacaag
gtgaagacggagctgagcagtggagaagacgagactgctgaggtggacgtggactctgac
actccagggacatccacaggacaacagcgggccaatcccagtcctaaaaagcgtggggtt
gtgttagacgtgcgtgcgtggcggggccaatgtcgggagctgttgcggcgtatgatggac
ggccctgactctgagcccttcagacagcctgtggacctcttcacctacccagactatcga
gacatcatagacactcccatggacctggggactgttacagaggcgctggtcgtcggaaac
tacgagaaccccatggagtttgccaaagatgtccgtctcattttcagcaactccaaagca
tatacacctaacaagaagtcacagatctacaccatgaccctgagccaatcagccttcttt
gagagacaaatcatctccatcatctccgactacaagtctgcagtccagaaccagcggagg
aggagtcgccagagtgtcagctacaggaagaggctgaacagtggaggcagctcccctccc
accagtcgaccctccagtcctaaagggaagcacaagtcggggaagaaagcaacacccaaa
aaatctcaaccctcatctaagagcctgtctcgcaggccatctcaggcgtcggagtcgagc
agcgtggtggtggaggaggacagccagccctcgtcctcctccagctccgggacaggcagc
cacattgggggcccaggggccgaccgtgtcacccgcagtcggaccacacccatcaagaac
tcgggtattactacacaggagcgtaacagacctctcaccaatggtgccagacagagccac
cggcgaagagtgctgcaggagggggaggagtctggaggatccaaaagctcctcttcatca
tcgtcttcctcatcattgtcctcatcagacagtgattcagacagtgagtcggaggttggg
aagtttgtggagggaggagatcacgactacagcaaagccccctgcttaaagacccgccac
aaagccaagggcaagatggacgtttctgggaagaggcggcggaaagaagaacaggaggcg
gaggaggctccagagagagccaagagagcacgagtccaggcagaggatgaggaggaggag
aaggatgaagaagatgacgacgaacaagatgaagacaatgaggaggaggaagaagaagag
gagccacagccgcaaccgcagaccgcagagagaggaggaggatga
DBGET
integrated database retrieval system
