Oncorhynchus gorbuscha (pink salmon): 124000302
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Entry
124000302 CDS
T07892
Name
(RefSeq) integrin beta-3-like
KO
K06493
integrin beta 3
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03266
Virion - Herpesvirus
ogo04081
Hormone signaling
ogo04145
Phagosome
ogo04148
Efferocytosis
ogo04510
Focal adhesion
ogo04512
ECM-receptor interaction
ogo04517
IgSF CAM signaling
ogo04810
Regulation of actin cytoskeleton
ogo04820
Cytoskeleton in muscle cells
ogo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
124000302
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
124000302
04512 ECM-receptor interaction
124000302
04517 IgSF CAM signaling
124000302
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124000302
04148 Efferocytosis
124000302
09144 Cellular community - eukaryotes
04510 Focal adhesion
124000302
09142 Cell motility
04820 Cytoskeleton in muscle cells
124000302
04810 Regulation of actin cytoskeleton
124000302
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124000302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124000302
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogo04147
]
124000302
04515 Cell adhesion molecules [BR:
ogo04515
]
124000302
04090 CD molecules [BR:
ogo04090
]
124000302
Membrane trafficking [BR:
ogo04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
124000302
Exosome [BR:
ogo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124000302
Cell adhesion molecules [BR:
ogo04515
]
Integrins
Integrin beta subunits
124000302
CD molecules [BR:
ogo04090
]
Proteins
124000302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
124000302
NCBI-ProteinID:
XP_046162531
LinkDB
All DBs
Position
LG16:26520011..26538798
Genome browser
AA seq
787 aa
AA seq
DB search
MGTFFDRLWIFSGLLLASSEVLGSNICTSRGVSTCRQCLAIHPSCAWCFKEEFGQGGSSV
SRCDLKQNLLDGGCTKEELEFPFSTLSVQKDTPLSDKASGAADDVTQIRPQKLRLTLRPD
DARRFTVTVKQVEDYPVDLYYLMDLSYSMKDDLARLRSLGNQLAAAMGRTTSNLRMGFGA
FVDKPLSPYMYTYPEEAVSNPCHGIQTRCLPQFGYKHVLSLTKQVERFTEEVAKQQVSRN
RDSPEGGFDAVIQAVVCKDKIGWRGDASHLLVFTTDATTHIALDGRLAGLVQPNDGQCHI
DRDNNYDKSSTLDYPSLALITEKMSENNINLIFAVTNNVVPLYQNYSQLIPGTTVGTLSD
DSGNVIQLILDAYERIRSKVELELLGVPEELALSFNATCLNGELIQGLKSCSGLKIGDTV
SFSVEARLHGCPKEKNRTFTIKPVGFKDALEVTVHFACGCDCEATAQPESPLCNQGNGTY
ECGVCQCHPGRLGDRCECADGDYRPSDQGNCSPKAEDAICSGRGNCVCGQCSCHTSGFGK
VWGKYCECDDFNCLRFKGEICSGHGKCDCGFCKCGSDWMGENCNCTTRTDTCMSSMGLLC
SGRGQCVCGACECTQPGAYGATCERCPTCPDACSIKKECVECKHFKRGRLFEEKSCARIC
RDEIQKVEELVFYEKNAVNCTYKDENDCVEHFQYYEDASGKSILYVLEPDCPKGPDILVV
LMAVAGAILFLGLAGLLIWKLLVTVHDRREFAKFEEERAKAKWDTANNPLYKGATTTFTN
VTYRGNS
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgggaactttttttgaccgactatggatattttctggtttattattagcttcttctgaa
gttcttggctcaaacatctgcacatctcgaggggtgagcacctgcagacagtgtttggct
atccaccctagctgtgcttggtgctttaaggaagagtttggccaagggggctccagtgtg
tcccgttgtgatctgaagcagaacctgctggatgggggttgtacgaaggaggagctagag
ttccccttcagtaccctcagcgtgcagaaagacacgcccctcagtgacaaggcgtcgggg
gcggctgacgacgtcacccagatcagaccccagaaactccgcctcactctgagaccagat
gatgccaggcgtttcacagtaacagtgaagcaggtggaggactacccagttgacctgtac
tatctgatggacctctcctactccatgaaggacgacttggcccgcctgcgctccctgggc
aaccagctggctgcagccatgggccgcaccaccagcaacctgcgtatgggctttggggcc
tttgtggacaagcccctgtccccatatatgtacacctatcctgaggaagccgtcagtaac
ccttgccatgggatccagacgcggtgcctgcctcagtttggctacaagcacgtgctgtct
ctgaccaagcaggtggagcgcttcaccgaggaggtggcgaagcagcaggtgtctcgtaac
agagactctccagagggaggcttcgacgcggtcatacaggcagtggtgtgcaaggacaag
ataggctggcgtggggatgcctcccacctgttggtgttcactaccgacgctacgacacac
atagccctggacggccggctggctggtctagtgcagcccaatgatggacagtgtcacatc
gacagagacaacaactatgacaagtcgtcaaccctggactacccctctctggctctgatc
acagagaagatgtctgagaacaacatcaacctcattttcgctgtgaccaacaatgtggtg
cccctctaccagaactacagccagctgattcctggcaccacggttggaacgctgtcggat
gactccgggaatgtgatccaactcatcctggatgcttacgagaggatccgttccaaggtg
gagctggagttgctgggtgttccagaggagcttgctctgtccttcaatgccacctgcctc
aacggagagctcatccagggactcaagtcctgctccggacttaagatcggagacacagtg
tcgttcagtgtggaggccaggttacacggctgccctaaggagaagaaccgtaccttcacc
attaaacctgtgggcttcaaggacgccctggaggttacggtccacttcgcctgcgggtgt
gactgtgaggccacagcccagcccgagagccctctctgtaaccagggaaatgggacctac
gagtgtggtgtgtgccagtgtcacccggggcgcctgggagaccgctgtgagtgtgccgac
ggggactacaggccttcagaccagggcaactgcagccccaaagctgaagacgccatctgc
agtgggaggggcaactgtgtgtgtggccagtgctcctgccacaccagtggctttggaaaa
gtgtggggcaagtactgcgagtgtgacgacttcaactgcctgcgcttcaaaggagagatc
tgctcaggccatgggaaatgtgactgtggcttctgcaagtgtggctctgactggatgggg
gagaactgtaactgcacaacccggacagacacttgcatgtccagtatgggcctgctgtgc
agcggccggggccagtgtgtgtgtggggcctgtgagtgcacccagccaggggcctacggg
gccacttgtgagaggtgtccaacctgccctgatgcctgcagcatcaagaaagaatgtgtt
gaatgtaagcacttcaagagaggccgtctctttgaggagaaaagctgtgcccgaatctgc
agggatgaaattcagaaggtggaagaactagtcttctatgagaagaatgctgtgaactgc
acctataaggatgagaatgactgtgtagagcacttccagtactacgaggatgccagtgga
aagtccatcctatatgtcctggagcctgactgtcctaaagggcctgatatcctggtggtt
ctcatggcggtggcgggggccatcttgtttctgggtctggctggcctgctcatctggaag
ctgctggtcaccgtccatgatcgccgagagttcgccaagtttgaggaggagagggctaag
gccaaatgggatacggctaacaaccccttgtacaaaggagccaccaccactttcaccaat
gtgacctaccgtgggaactcttga
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integrated database retrieval system