KEGG   Oncorhynchus gorbuscha (pink salmon): 124000302
Entry
124000302         CDS       T07892                                 
Name
(RefSeq) integrin beta-3-like
  KO
K06493  integrin beta 3
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03266  Virion - Herpesvirus
ogo04081  Hormone signaling
ogo04145  Phagosome
ogo04148  Efferocytosis
ogo04510  Focal adhesion
ogo04512  ECM-receptor interaction
ogo04517  IgSF CAM signaling
ogo04810  Regulation of actin cytoskeleton
ogo04820  Cytoskeleton in muscle cells
ogo05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    124000302
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    124000302
   04512 ECM-receptor interaction
    124000302
   04517 IgSF CAM signaling
    124000302
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    124000302
   04148 Efferocytosis
    124000302
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    124000302
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    124000302
   04810 Regulation of actin cytoskeleton
    124000302
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    124000302
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ogo04131]
    124000302
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ogo04147]
    124000302
   04515 Cell adhesion molecules [BR:ogo04515]
    124000302
   04090 CD molecules [BR:ogo04090]
    124000302
Membrane trafficking [BR:ogo04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    124000302
Exosome [BR:ogo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124000302
Cell adhesion molecules [BR:ogo04515]
 Integrins
  Integrin beta subunits
   124000302
CD molecules [BR:ogo04090]
 Proteins
  124000302
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail EGF_integrin PSI_integrin I-EGF_1 EGF_2 EGF_TEN
Other DBs
NCBI-GeneID: 124000302
NCBI-ProteinID: XP_046162531
LinkDB
Position
LG16:26520011..26538798
AA seq 787 aa
MGTFFDRLWIFSGLLLASSEVLGSNICTSRGVSTCRQCLAIHPSCAWCFKEEFGQGGSSV
SRCDLKQNLLDGGCTKEELEFPFSTLSVQKDTPLSDKASGAADDVTQIRPQKLRLTLRPD
DARRFTVTVKQVEDYPVDLYYLMDLSYSMKDDLARLRSLGNQLAAAMGRTTSNLRMGFGA
FVDKPLSPYMYTYPEEAVSNPCHGIQTRCLPQFGYKHVLSLTKQVERFTEEVAKQQVSRN
RDSPEGGFDAVIQAVVCKDKIGWRGDASHLLVFTTDATTHIALDGRLAGLVQPNDGQCHI
DRDNNYDKSSTLDYPSLALITEKMSENNINLIFAVTNNVVPLYQNYSQLIPGTTVGTLSD
DSGNVIQLILDAYERIRSKVELELLGVPEELALSFNATCLNGELIQGLKSCSGLKIGDTV
SFSVEARLHGCPKEKNRTFTIKPVGFKDALEVTVHFACGCDCEATAQPESPLCNQGNGTY
ECGVCQCHPGRLGDRCECADGDYRPSDQGNCSPKAEDAICSGRGNCVCGQCSCHTSGFGK
VWGKYCECDDFNCLRFKGEICSGHGKCDCGFCKCGSDWMGENCNCTTRTDTCMSSMGLLC
SGRGQCVCGACECTQPGAYGATCERCPTCPDACSIKKECVECKHFKRGRLFEEKSCARIC
RDEIQKVEELVFYEKNAVNCTYKDENDCVEHFQYYEDASGKSILYVLEPDCPKGPDILVV
LMAVAGAILFLGLAGLLIWKLLVTVHDRREFAKFEEERAKAKWDTANNPLYKGATTTFTN
VTYRGNS
NT seq 2364 nt   +upstreamnt  +downstreamnt
atgggaactttttttgaccgactatggatattttctggtttattattagcttcttctgaa
gttcttggctcaaacatctgcacatctcgaggggtgagcacctgcagacagtgtttggct
atccaccctagctgtgcttggtgctttaaggaagagtttggccaagggggctccagtgtg
tcccgttgtgatctgaagcagaacctgctggatgggggttgtacgaaggaggagctagag
ttccccttcagtaccctcagcgtgcagaaagacacgcccctcagtgacaaggcgtcgggg
gcggctgacgacgtcacccagatcagaccccagaaactccgcctcactctgagaccagat
gatgccaggcgtttcacagtaacagtgaagcaggtggaggactacccagttgacctgtac
tatctgatggacctctcctactccatgaaggacgacttggcccgcctgcgctccctgggc
aaccagctggctgcagccatgggccgcaccaccagcaacctgcgtatgggctttggggcc
tttgtggacaagcccctgtccccatatatgtacacctatcctgaggaagccgtcagtaac
ccttgccatgggatccagacgcggtgcctgcctcagtttggctacaagcacgtgctgtct
ctgaccaagcaggtggagcgcttcaccgaggaggtggcgaagcagcaggtgtctcgtaac
agagactctccagagggaggcttcgacgcggtcatacaggcagtggtgtgcaaggacaag
ataggctggcgtggggatgcctcccacctgttggtgttcactaccgacgctacgacacac
atagccctggacggccggctggctggtctagtgcagcccaatgatggacagtgtcacatc
gacagagacaacaactatgacaagtcgtcaaccctggactacccctctctggctctgatc
acagagaagatgtctgagaacaacatcaacctcattttcgctgtgaccaacaatgtggtg
cccctctaccagaactacagccagctgattcctggcaccacggttggaacgctgtcggat
gactccgggaatgtgatccaactcatcctggatgcttacgagaggatccgttccaaggtg
gagctggagttgctgggtgttccagaggagcttgctctgtccttcaatgccacctgcctc
aacggagagctcatccagggactcaagtcctgctccggacttaagatcggagacacagtg
tcgttcagtgtggaggccaggttacacggctgccctaaggagaagaaccgtaccttcacc
attaaacctgtgggcttcaaggacgccctggaggttacggtccacttcgcctgcgggtgt
gactgtgaggccacagcccagcccgagagccctctctgtaaccagggaaatgggacctac
gagtgtggtgtgtgccagtgtcacccggggcgcctgggagaccgctgtgagtgtgccgac
ggggactacaggccttcagaccagggcaactgcagccccaaagctgaagacgccatctgc
agtgggaggggcaactgtgtgtgtggccagtgctcctgccacaccagtggctttggaaaa
gtgtggggcaagtactgcgagtgtgacgacttcaactgcctgcgcttcaaaggagagatc
tgctcaggccatgggaaatgtgactgtggcttctgcaagtgtggctctgactggatgggg
gagaactgtaactgcacaacccggacagacacttgcatgtccagtatgggcctgctgtgc
agcggccggggccagtgtgtgtgtggggcctgtgagtgcacccagccaggggcctacggg
gccacttgtgagaggtgtccaacctgccctgatgcctgcagcatcaagaaagaatgtgtt
gaatgtaagcacttcaagagaggccgtctctttgaggagaaaagctgtgcccgaatctgc
agggatgaaattcagaaggtggaagaactagtcttctatgagaagaatgctgtgaactgc
acctataaggatgagaatgactgtgtagagcacttccagtactacgaggatgccagtgga
aagtccatcctatatgtcctggagcctgactgtcctaaagggcctgatatcctggtggtt
ctcatggcggtggcgggggccatcttgtttctgggtctggctggcctgctcatctggaag
ctgctggtcaccgtccatgatcgccgagagttcgccaagtttgaggaggagagggctaag
gccaaatgggatacggctaacaaccccttgtacaaaggagccaccaccactttcaccaat
gtgacctaccgtgggaactcttga

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