Oncorhynchus gorbuscha (pink salmon): 124001693
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Entry
124001693 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec23A-like
KO
K14006
protein transport protein SEC23
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124001693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124001693
Membrane trafficking [BR:
ogo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
124001693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
124001693
NCBI-ProteinID:
XP_046164648
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Position
LG17:35195197..35221051
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AA seq
765 aa
AA seq
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MATFPEFIAQNEERDGVRFSWNVWPSSRLEATRMVVPVASLFTPLKERPDLPPIQYEPVL
CSRVTCRAVLNPLCQVDYRAKLWACNFCYQRNQFPPTYAGISDVNQPAELLPQFSTIEYV
VQRGPLMPLVFLYVVDTCMEDEDLQALKESLQMSLSLLPPTALVGLITFGRMIQVHELGC
EGISKSYVFRGTKDLNSKQLQEMLGLTKPTAAQAGRGPQAPQAPLSNRFLQPVQKIDMNL
TDLLGELQRDPWPVTQGKRPLRSLGSAMSIAVGLLECTFPNTGARIMTFIGGPATQGPGM
VVGDELKAPIRSWHDIEKDNAKFMKKGTKHYEALASRASTNGHIIDIYACALDQTGLLEM
KCCSNHTGGYMVMADSFTTSLFKQTFQRVFTKDVSGAFKMAFAGTLEIKTSREIKISGAI
GPCVSLNAKGPCVSENEIGTGGTSQWKICGLDHNTTLAVYFEVVNQHNAPIPQGGRGAVQ
YVTQYQHSSGQKRIRVTTTARNWADAGTQIQTIAASFDQEASAILMARLAVYRAETEEGP
DVLRWLDRQLIRLCQKFGDYHKDDPNSFRFSETFSLYPQFMFHLRRSPFLQVFNNSPDES
SYYRHQFMRQDLTQSLIMIQPILYAYSFKGPPEPVLLDSSSILPDRILLMDTFFQILIYH
GETVSQWRKAGYQELPEYENFRHLLQAPVDDAQEILHSRFPMPRYIDTEHGGSQARFLLS
KVNPSQTHNNMYAWGQESGAPILTDDVSLQVFMDHLKKLAVSSAA
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccttcccggagtttattgcacagaatgaggagcgtgatggggtgcgcttcagc
tggaatgtctggccctctagtcgtctggaggccacccgcatggtggtccccgttgcctct
ctgttcacccccctgaaagagcggccagatctgccccccatccagtatgagcctgtgctg
tgtagcagggtgacctgccgtgctgtcctcaaccccctctgccaagtggattacagagcc
aaactgtgggcttgtaacttctgctatcagagaaatcagtttcctcctacctatgctggg
atatcagatgtcaaccagccagccgagctgctgccacagttctccaccattgaatatgtg
gtccagagaggtcccctgatgccgcttgtcttcctgtatgtggtggacacctgcatggag
gatgaggacctgcaggctctgaaagagtccttacagatgtccctatccctgcttcctcct
acggccctggtgggcctcatcacctttggacgcatgatccaagtccacgagctgggctgc
gagggcatctccaagagctatgtcttcaggggaaccaaagacctcaactccaaacaattg
caggagatgctggggttgaccaagcccactgctgcacaggcaggacggggaccacaagct
ccacaggcccccctctccaacagattcctccaaccagtccagaagattgacatgaacctg
acagacctgcttggagagctgcagagagatccctggcctgtcactcagggaaaacggccc
ctccgctcgttaggatcagccatgtccattgctgttggcttgctggagtgtaccttccct
aacactggggcacgcatcatgaccttcatcggtgggccagccactcagggcccaggcatg
gtggtaggagatgagctgaaggcccctattcgctcctggcatgacattgagaaggacaat
gccaagttcatgaagaaggggaccaaacattatgaggcattggcgagccgtgcttccacc
aatggccacatcatagacatctatgcatgcgctctggaccagactggactgctggaaatg
aagtgttgttccaatcacactggaggctacatggtgatggcggactctttcaccacctca
ctattcaaacaaaccttccagagggtttttaccaaagatgtgtctggagccttcaagatg
gccttcgcaggcactctggagataaagacatctcgagagatcaagatttcaggagctatc
gggccatgtgtgtcattaaatgccaaaggaccgtgtgtatctgaaaatgaaattggaaca
gggggcacctctcaatggaagatctgtggtcttgatcataacaccactctggcagtgtac
tttgaggtggtcaatcagcataatgcacctattccccaggggggccgaggagcggtccag
tatgtcacacagtaccaacactccagtggacagaaacgcattcgagtcaccaccaccgcc
agaaactgggcagatgcagggacccagatccagactattgcagcatcatttgaccaggag
gcttcagccatcctgatggctagactggctgtgtaccgcgctgagaccgaggagggccct
gatgtgcttcgctggctggacaggcagctcatccggctgtgtcagaagtttggagattat
cataaggatgatcccaactctttccgcttctcagaaaccttttctctctatccccagttt
atgttccacctaagaagatctcctttcctgcaagtgttcaacaacagcccagatgagagc
tcatactacagacaccagttcatgcgtcaggacctgacccagtctctcatcatgatacaa
cccattctctacgcctactccttcaaagggcccccagagcctgtgttgctggacagcagc
agtatccttcctgatcgcatccttctcatggacaccttcttccagatcctcatctaccat
ggagagactgtgtctcagtggcgtaaggcaggctaccaggagttgccagagtacgagaac
ttccgccacctgctgcaggctcctgtggacgacgcccaggagatcctccacagccgcttt
cctatgccccgctacatagacacagagcacggcggatcacaggctcgtttcctgctatct
aaagtaaacccatcacaaacccacaacaatatgtatgcatggggccaggagtcaggtgct
ccgatcctgacggatgacgtcagtctccaggtgttcatggaccacctgaagaagctggct
gtgtccagcgcagcctga
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