Oncorhynchus gorbuscha (pink salmon): 124002438
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Entry
124002438 CDS
T07892
Name
(RefSeq) calpain-2 catalytic subunit-like
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04141
Protein processing in endoplasmic reticulum
ogo04210
Apoptosis
ogo04217
Necroptosis
ogo04218
Cellular senescence
ogo04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124002438
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
124002438
04217 Necroptosis
124002438
04218 Cellular senescence
124002438
09144 Cellular community - eukaryotes
04510 Focal adhesion
124002438
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogo01002
]
124002438
Enzymes [BR:
ogo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
124002438
Peptidases and inhibitors [BR:
ogo01002
]
Cysteine peptidases
Family C2: calpain family
124002438
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GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_8
EF-hand_1
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
124002438
NCBI-ProteinID:
XP_046165766
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Position
LG18:21941818..21960321
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AA seq
698 aa
AA seq
DB search
MSGMASNLAKKRALAAGFGTNANAVKYLNQDFEALRAQCLSRGGLFSDPTFPAAPESLGF
NELGPGSYKTRAVQWKRPGELCSSPEFIVGGATRTDICQGALGDCWLLAAIASLTLNEDV
MARVVPVGQSFGESYAGIFHFQFWQFGEWVDVVIDDRLPTKDGELLFVHSAEGSEFWSAL
LEKAYAKVNGCYEALSGGSTTEGFEDFTGGIAENYDLRKPPPNMFQIIKKAIESGALLGC
SIDITSAADSEAVTRQKLVKGHAYSLTGAVEVTYRGRKEKLIRIRNPWGQVEWTGAWSDS
SSEWNSVDDSERQNVKADDGEFWMSFTEFLRHYSRIEICTLTPDTLTDDSVKHWSVCNYD
GSWRKGSTAGGCRNHAYTFWMNPQFVIRLDEEDDDPDDNEVGCSFVVGLIQKNRRRLRKV
GEDMHTIGFAIYEVPSQFHGQREVHLDKNYFLTHAQKARSETFVNLREVSTRFKMPPGEY
LIVPSTFEPHLNGDFCIRVFSEKQTETRPCDDPVKADLDDETVSDAEVDAGFRGLFTKLA
GDDMEISAAELKTIMNKIVSKRTDIKTDGFSLETCRIMVNLMDDSGNGKLGLGEFATLWK
KVQKYLGIYKKNDMDNSGTMSTPEMRMALKEAGFTLNNGIYQILVARYAEPDMTIDFDNF
VACLMRLDMMFRVFMKIDAHDSGSIELNFHQWLTFTMI
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaatggcgtctaacctagctaaaaagcgggcattggctgcagggtttggcact
aatgctaatgcggtgaaatatctcaatcaggattttgaagcgcttagggcgcaatgttta
agtcgtggagggctattctcggatccaactttcccagccgcacccgaatctttgggcttt
aatgaactcggaccaggctcgtacaaaactagagcagtgcaatggaaaaggccaggagag
ttgtgctcaagtccagagttcattgttggaggagccaccagaacagatatctgtcaagga
gctctaggtgactgttggcttttagctgccattgcctctttgacactcaatgaagatgtc
atggctagagtggtccccgttggacagagctttggggaaagttacgctggcatttttcat
tttcagttttggcagtttggggagtgggtggatgttgtcattgatgacaggctgcccaca
aaagatggagagctgctgtttgttcactcagctgagggctcagagttctggagtgcactg
ctggagaaggcctacgctaaggtgaatggctgctacgaggccctgtctgggggctcgacc
actgagggctttgaggacttcactgggggcattgcagagaactacgacctgaggaaaccc
cctccgaacatgttccagattattaagaaggcaattgagtcaggggctctgcttggctgc
tccattgacataaccagcgccgctgattctgaggcagtcacacgacagaagctggtgaaa
gggcatgcctactccctaacaggggctgttgaggtgacctatcgtggccgtaaggagaag
ctgatcaggatacgtaacccttggggccaagtggagtggacaggggcttggagtgacagc
tcctcagagtggaactccgttgatgattcagagcgccagaacgtcaaagctgatgatgga
gaattctggatgtcatttacagagttcctgcggcattactctcgcatagagatttgcact
ctgaccccagatacactaacggatgactctgtgaagcactggagtgtgtgtaactatgat
ggtagctggaggaagggttccactgctggggggtgcaggaaccacgcctacaccttctgg
atgaacccccagtttgtgatcaggctggatgaggaggacgatgaccctgatgataacgag
gtgggctgcagcttcgtggtgggcctgatccagaagaaccggcgccggctgaggaaagta
ggcgaagacatgcacaccattggctttgccatctatgaggttccatcacagtttcatggt
cagagggaggtacacctggacaagaattatttcctgacacatgctcaaaaggcccggtct
gagaccttcgtcaaccttcgggaggttagcacccgcttcaaaatgccccccggggagtac
ctcattgtgccctccaccttcgagccccacctaaatggtgacttctgcatccgtgttttc
tcagagaagcagactgagactcgaccatgcgacgatcctgtcaaggcagatttagatgac
gagactgtatctgatgctgaagtcgacgcaggatttagaggcttgtttacaaagcttgca
ggagatgacatggagatctctgcagcagagctgaaaaccatcatgaataagattgtctcc
aaacgaactgacatcaaaacagacggcttcagtcttgaaacctgtagaatcatggtcaac
ctcatggatgacagtgggaatggaaaattgggccttggggaattcgctactctgtggaag
aaagtgcagaaatacctgggtatctataagaagaatgacatggacaattcaggcaccatg
agtactccagagatgcgtatggccctgaaagaagcaggcttcactttgaacaatggcatt
tatcagatcctcgtggctcgctacgctgagccagacatgaccatcgactttgataacttt
gtggcctgccttatgcgtctggatatgatgttcagagtctttatgaagattgatgctcat
gacagtggctccattgagctcaacttccatcagtggctaacatttacgatgatctag
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