Oncorhynchus gorbuscha (pink salmon): 124006944
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Entry
124006944 CDS
T07892
Symbol
paxbp1
Name
(RefSeq) LOW QUALITY PROTEIN: PAX3- and PAX7-binding protein 1
KO
K13211
GC-rich sequence DNA-binding factor
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
124006944 (paxbp1)
Spliceosome [BR:
ogo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
124006944 (paxbp1)
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Gene cluster
GFIT
Motif
Pfam:
GCFC
NTR2
Motif
Other DBs
NCBI-GeneID:
124006944
NCBI-ProteinID:
XP_046173089
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All DBs
Position
LG20:complement(42009972..42059841)
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AA seq
907 aa
AA seq
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MFKKAKRSNLRRRNESDEDEKEESQPPCGPFAEDIPVLDAANADTLSGVNVDLHHGNGFQ
SKAVKKEKKTRDVGEPPKASLLSFDDDEDEAEVFRVKKSNHSKKIVKQLKKEYKEDLEKV
CYVKPEPNTDVWPQPLASIKEEPASRAGSEQGEEEMEVDSTDEQEPKTERPSLASKTPTT
TAAGAFSNTSTLSTLSTLRPGEIPDAAFIHAARKRRQMARELGGDAPLVETDTPKKRLVR
EEEEEGDGSDDEDEDEKRISFSGVKNKSQRTRIAEEIGIEGSDDEALDTGGQDEEVSRWE
QEQIRKGISIPQVQSCQPDDNGSVYYHSSSYDPQQPYSSTYSLPYSYSSKPEGCTLVYSA
PGGDLSPVTTDLVKTRLRDRLSQMRVGHDANAKRYDQIQEELEAAQNTIRRLEGSSNDDA
EQYKFLQEMRGYVRDLLECFGEKVPNVAELEGNMHQLLRQRACRLVQRRQDDIKDESAEF
ASLSSKAVMAPNLMSVDSFGRDRTVYQEHARQRRIAEREARRTRRRQAREQNGKRTEHLE
GLSSDDEETSTDLTSYCLERDRIVRESKKVFEDVLEDFHSLDSIKSRFEVWRHLYFTCYR
DAYIGLCLPKLFNPLVRLQLITWSPLQEKCANFEYMLWFESLLFYGCEEQSGMKKGDVDI
NLSVIVERVILPKLAVLAEQVWDPLSXSQTTRLVSFVTRLLRGSLLGYPTVLNGDNRNTQ
EFLKTIVLRTRRTLDDDVFLPLYPKNVLENKNSGPYLFFQRQFWSCVKLLGNILQWSGVL
SGSTVRELALDSTLNRYILSALQNAEAGEDSVLKSQRVVECFPAQWFVGLKGQQTLPQLE
PFCRYLTHLASALLRGSLGGSDIDKRNAKEQIKEVVKLLARLNALDHLITVATEHGIKDI
TPLLDSK
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaaaagcaaagagatctaatttaagacggagaaatgagtcggacgaggacgag
aaagaagaaagtcagccgccatgcgggcctttcgccgaggatatcccggtgctcgatgcc
gccaacgcagacaccttgtccggggttaacgtggacctgcaccacggcaacgggtttcag
tcaaaggccgtaaagaaggaaaagaaaactcgggatgtaggggaacccccgaaagccagt
ttgctgagctttgacgacgacgaagacgaggccgaggtgttccgagtaaagaagtccaac
cacagcaagaagatcgtgaagcaactgaagaaagaatacaaggaggatctggagaaggtg
tgctatgttaaaccagagcccaacaccgacgtgtggccccagcccctggcctccattaaa
gaggagcctgccagcagggcaggcagtgagcaaggagaggaggagatggaagtggacagc
actgatgaacaggagccgaagacagaaaggccgagcctcgcctccaagactcccacgaca
actgcagccggagccttctcaaacaccagcaccttgtccacgctcagcaccctgcgtcca
ggtgagatcccagacgctgccttcatccacgcggcaaggaagcgtcgtcagatggcgagg
gagctaggcggcgacgcccccctggtggagacggacactcccaagaagcgtctggtccga
gaggaggaagaggagggagacgggagcgacgacgaagacgaagacgagaagaggatcagc
ttcagtggagtcaagaacaagagccagaggaccaggatagcagaggagataggtatagag
ggtagtgatgacgaggcgttggatactggaggtcaggatgaggaggtgtcacgctgggaa
caggagcagatacgcaaagggatcagcatcccccaggtccagtcctgccagccagacgac
aacggtagcgtgtactaccacagcagcagctacgacccccagcagccctacagctctacc
tacagcctgccctactcctacagcagcaagcctgagggttgcacactggtctacagtgcc
cctggcggtgacctctcacctgtcactactgacctggtcaagacacgcctcagagacagg
ctgagccagatgcgtgtggggcatgatgctaatgctaagcgctacgatcagatccaggaa
gaactcgaggcagctcagaacaccattcgccggctcgagggttcatccaatgacgacgca
gaacagtataaattcttgcaagagatgcgagggtatgttcgagacttgcttgagtgtttc
ggtgaaaaggttcccaacgtggcggagctggagggcaacatgcaccagttactaaggcaa
cgggcctgtcggctggtccagcggcgccaggatgatattaaagatgaatcggcggagttt
gccagcctttcaagtaaggctgtgatggctcctaacctcatgtctgttgactcgtttggg
agagacaggacagtctatcaggagcacgccagacagagaaggatcgctgaacgggaagcc
agacgaacgcggcggcgacaggcgcgggagcagaacgggaaaaggacagagcatctagag
gggctgtcctccgacgatgaggagacatcgactgacctcacatcgtactgtctggagaga
gatcgtatagtgcgtgagagtaagaaggtgtttgaagatgtgctggaggatttccattct
ctggacagtatcaagagtcgttttgaagtgtggagacatctctacttcacctgctacaga
gacgcttacatcggactgtgtctgcccaaattattcaaccccctggtacgactacagctc
atcacatggagccctctacaggagaagtgtgctaacttcgagtacatgttgtggtttgag
tcattgttgttctatggctgtgaggagcagagtgggatgaagaaaggagacgtggacatc
aacctgtctgttatagtggagagggttatactgccaaaactagcagtgctagctgagcag
gtgtgggatcctctgtccntgtctcagacaaccagactggtgagctttgtgaccagactc
ctcagaggatccctactaggataccctactgttctgaatggagacaacaggaacacacag
gagtttctgaagaccatcgtattgaggaccagaaggactctggatgatgatgtgttctta
cctctgtaccccaagaacgtgttggagaataagaacagtggtccctacctcttcttccag
aggcagttctggtcctgtgtcaagttgctaggtaacatcctccagtggagtggtgtattg
tctggttccacggtgagggagttggctctggactccaccctgaacagatacatcctgtca
gccctacagaacgctgaggctggggaagacagcgtactgaagagtcagagggtggtggag
tgtttcccagcccagtggtttgtagggttgaaaggtcagcagaccctgcctcagctggag
cccttctgtcgttacctcacccacctggcctctgctctgctgagaggctctctggggggg
tccgacatcgacaagaggaacgccaaggagcagatcaaggaggtggtgaagctcttagct
cggctcaacgctctggatcacctcatcaccgtggcaacggaacacggcatcaaggacatc
acacctctactggactccaagtga
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