Oncorhynchus gorbuscha (pink salmon): 124010500
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Entry
124010500 CDS
T07892
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogo04040
]
124010500
Ion channels [BR:
ogo04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
124010500
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
FixH
Motif
Other DBs
NCBI-GeneID:
124010500
NCBI-ProteinID:
XP_046178949
LinkDB
All DBs
Position
LG23:59864789..59902775
Genome browser
AA seq
2011 aa
AA seq
DB search
MAQLLVPPGPDSFCHFCPDSLAAIERRIAEEEARKPRVDRCSDSNDDNEPKPNSDMEAGK
SLPFIYGDIPQGFVSTPLEDLDPFYSNQKTFIVLNRGKAIFRFNATPACYILSPFNPLRR
IAIAVLVHSMFSMLIMFTILTNCAFMTLSNPPDWAKNVEYTFTGIYTFESLIKILARGFC
VGKFTFLRDPWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCIRNLANDTTPDDRLNRTLGTPD
LNGTDFNGTDFNITSSVNWTEYINNESNYYYLLNRRDALLCGNGSGAGLCPEGFTCIKAG
RNPDYDYTSFDSFGWAFLSLFRLMTQDFWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLV
NLILAVVAMAYDEQNQATIEEAAQKEEEFQAMLEQLKRQQEEALVAAAAATESHGEYSGR
GGPSSEASSGTSKLSSKSAKERMNRQKKRKERGEHKKFHKSESEDSIKRLSFRFSIDANR
LSYEKRCSSPNQSLLSIRGSLFSPRRNSQASLFSFRGRARDAVSDNDFADDEQSTFEDTD
SRRGSLFAPCRVECRSSTVSQTSLAPQRVLLPANGKMHCTVDCNGVVSLVGGTSVPTSPV
GLLLPEGTTTDSEMRLKKRRSRQASMVYLDEPGRARARVMSVASILTNTMEELEESRQKC
PPCWYKFANTYLIWDCCPMWLSFKGIVNTVVMDPFVDLAITVCIVLNTLFMAMEHYPMTT
EFNHVLSVGNLVFTGIFTAEMCFKLIALDPYYYFQQGWNIFDGIIVSLSLMELGLANVEG
LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGK
SYKECVCKIADNCQLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCLIVFMM
VMVIGNLVVLNLFLALLLSSFSADNLAATDDDSEMNNLQIAVGRIQRGVAWVKVTIRQVI
QSLFLGGGATKRVKGESLEGGKTLDELHSSINGKGGNCISKHSLVEISKDPSGVYLKEGN
GRPGGGLGVGLGDSTENYPKEECNYMSFIHNPSLTVSVPIAVCESDFETAITEDFSSDSA
SEEMSMGSKEKLPIEPQHLISSEGSSVDIGPPGDGAESVELEDEESENPENCFTDGCVFR
FQCCQVNVEEGKWKMWWTLRKTCFLIVEHNWFETLIIFMILLSSGALAFEDIYIEQRKTI
KVVLEYADKVFTYIFILEMLLKWVAYGFKKYFTNAWCWLDFLIVDVSLVSLVANALGYSE
LSAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNL
FAGKYYHCVNTTNDETFPIEVVNNKSDCLALANDSARWKNVKINFDNVGAGYLALLQVAT
FKGWMDIMYAAVDSRNVELQPQYEQNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQK
KKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPTNAFQGCVFDFVTKQAFDIVIMIL
ICLNMVTMMVEEDDQTPEREKILHWINFVFIVLFTGECTLKMISLRHYYFTIGWNVFDFV
VVILSIVGMFLSELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPAL
FNIGLLLFLVMFIYAIFGMSNFAYVKHEAGIDDMFNFETFGNSMLCLFQITTSAGWDGLL
APILNKKEPDCDSQMEHPGTLYRGNCGNPPVAMFFFVSYIIICFLIVVNMYIAVILENFS
VATEESAEPLSEDDFEMFYEVWERFDPDATQFVEYDKLSDFADALDPPLRMAKPNHIQLI
KMDLPMVSGERIHCLDILFAFTKRVLGEGEGLDLLRGQMEERFMASNPSKVSYEPITSTL
RRKQEDMSALVIQRSFRRYLARLALKKAAELYKEQPKGSVMYELEDKEVLVIGQFADNST
STEKTDITPTTASLPSYNSATNLEKDQYEKE
NT seq
6036 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtaccgcccggacctgacagcttctgccacttctgtcccgactcg
cttgccgccatcgaaaggcgcattgccgaggaggaggcccggaaaccccgcgtggaccgc
tgtagcgacagcaatgacgacaacgagcccaagcccaacagcgacatggaggcagggaag
tctctccccttcatctacggggacatcccccaaggctttgtctccacccctctggaggac
ctggaccccttttactccaaccagaagacatttatagtattaaatcgtggcaaggcaata
ttccgtttcaacgccactcctgcctgttacatcctaagccccttcaatcctctacggaga
atagcaattgcagttttagtacactcgatgttcagcatgttgatcatgttcaccattctg
accaactgtgcttttatgactctgagcaaccccccggactgggccaagaatgttgagtac
acattcacaggaatttacacattcgagtctctcattaaaatcttggcgagggggttctgt
gtggggaagttcaccttcctcagggatccatggaactggttggacttcatggtaatctcc
atggcatatgtgacagagtttgtggacctgggtaatgtctcggccctcagaaccttcagg
gttctccgagccctcaaaactatatcagtcatcccaggactaaagaccatcgtgggcgct
ctgatccagtcggtcaagaagctctccgacgtcatgatcctcaccgttttctgtctcagc
gtcttcgccctgattggcctgcagctcttcatgggcaacctgaggcagaagtgtatccgc
aacctcgccaatgacacgacccccgacgaccgcctgaacagaactctgggaactccagac
ttaaatggaaccgatttcaacggaaccgatttcaacatcactagctccgtaaactggact
gagtacatcaacaatgagagtaattactattacctcctcaaccgcagggacgccctcctc
tgtgggaatggcagtggagccgggctgtgcccagagggattcacgtgcattaaggcgggc
aggaacccagactacgactacacaagcttcgactcgtttggctgggccttcctgtccctg
ttcagactcatgacccaggacttctgggaaaacctctaccaacagaccctgcgagcggcg
gggaagccctacatgatcttctttgtgttggtgatcttcctgggttccttctacctggtc
aacctgatcctggctgtggtggccatggcctacgacgagcagaaccaggccaccatagag
gaggcagcccagaaggaggaggagttccaggccatgttggagcagctcaagagacagcag
gaggaagcattggttgccgcggcagcagccacagagagccacggagagtacagcgggaga
ggggggccctcctcagaagcctcctcagggacctccaaactcagctccaagagcgccaag
gagagaatgaaccgtcagaagaagagaaaagagaggggagagcacaagaagttccacaag
tccgagtcggaggacagtatcaagaggctaagcttccggttttcgatagatgccaaccgg
ctgtcctacgagaagagatgctcctcacccaaccagtctctcctcagtatccgcggctcc
ctcttctccccgaggaggaacagccaagctagcctgtttagcttccgaggccgcgcccgc
gatgctgtctccgataacgacttcgccgacgacgagcagagcacgttcgaggacaccgac
agccgccgcggctccctgttcgcgccttgccgtgtcgagtgccgctccagcacggtcagt
cagactagcctggcccctcagcgcgtcctgcttcccgccaacggcaagatgcactgcacc
gtggactgtaacggcgtcgtctcgctagtgggagggacctcggtgcccacctcgcctgta
ggactgctcctgcctgaggggacgaccactgactctgagatgaggctgaagaagaggagg
tctcgccaggcttccatggtctacctagatgaaccaggcagagccagagccagagtgatg
agtgtggccagtattctcaccaacaccatggaggagcttgaagagtccaggcagaagtgt
ccaccatgctggtataagtttgccaacacctatctgatctgggactgctgtcctatgtgg
ttgagcttcaaggggatcgtcaacacggtggtgatggacccctttgtggacctggccatc
accgtctgcatcgtcctcaacaccctgttcatggccatggaacattatcccatgaccacg
gagttcaaccacgtcctctccgtcgggaacttggtgtttacaggcatcttcacggctgag
atgtgtttcaagctaatcgctctggatccctactactactttcaacaggggtggaacata
tttgacggcatcatcgtcagtctgagtctgatggagctcggcctggccaatgtggagggc
ctgtctgtgctccggtctttccgattgttgagggtgttcaaactggccaagtcttggccc
accctgaacatgctgatcaagatcatcggtaactcggtgggagctctgggtaacttgaca
ctggtcctagccatcatcgtgttcatcttcgccgtggtgggcatgcagctgttcggcaag
agctacaaggagtgtgtgtgtaagatcgcagacaactgccagctgccccgctggcacatg
cacgacttcttccactcgttcctcatcgtattccgggtgctgtgtggggagtggatcgag
accatgtgggactgtatggaggtggctggccagagcatgtgtctcatcgtctttatgatg
gtcatggttatagggaacctggtggttctgaatctgttcctggccctgctgctcagctcc
ttcagcgccgacaacctggcggccacagacgacgacagcgagatgaacaacctgcagatc
gctgtgggccgcatccagaggggcgtggcctgggtcaaggtgaccatccgccaggttatc
cagagcctgttcctcgggggcggagccaccaaacgggtcaagggggagtcactggagggg
ggtaagaccctggacgagctccacagctccatcaacggcaaggggggcaactgcatctca
aaacactcgttggtcgagatcagtaaagatccgagtggggtctatctgaaggaggggaac
gggcggcccggaggggggttgggggtggggttaggagacagtacggagaattacccaaag
gaggagtgcaactacatgtcgttcatccacaaccccagcctgacggtgagcgtgcccatc
gcggtgtgcgagtcagactttgagaccgctatcacagaggacttcagcagcgactcggcc
tccgaggaaatgtctatgggcagcaaagagaagctacctatagagccccagcaccttatc
tcgtcggagggcagctcggtggatatcggtcccccgggggatggagctgagtcagtggag
ctggaggacgaggagtcagagaacccagagaactgcttcactgatggctgtgtgttcagg
ttccagtgttgccaggtgaacgttgaggagggcaagtggaagatgtggtggactttgagg
aagacgtgcttcctcatcgtggaacacaactggttcgagaccttaatcattttcatgatc
ctgctcagcagtggcgctctggcgtttgaagacatttacatagagcagaggaagaccatt
aaggtagtgctggagtacgcagacaaagtcttcacttatatcttcatcctggagatgctg
ctgaagtgggtggcctacggattcaagaagtacttcaccaacgcctggtgttggctggac
ttcctcattgttgatgtgtctctggtgagcttggtagccaatgcgttaggctactctgag
ctgagtgccattaagtccctacgaaccctgcgggccttaagacccctgagggccttgtca
cggttcgagggcatgagggtggtggtgaacgccctcctgggtgccatcccgtccatcatg
aacgtgctgctggtgtgcctcatcttctggctcatcttcagcatcatgggcgtcaatctg
ttcgcagggaagtactaccactgcgtcaacaccaccaacgacgagacctttcccatcgag
gtggtcaacaacaagagcgactgtctggccctggccaatgacagcgcccgatggaagaat
gtcaagatcaactttgataatgtcggggccgggtacttggccttgttgcaagtggcaacg
ttcaaaggttggatggacatcatgtacgcagctgtggactctcgtaatgtggagcttcag
ccccaatatgaacagaacctctacatgtatctgtacttcgtcatcttcatcatctttggc
tccttcttcactctcaacctcttcattggtgtcatcattgacaacttcaaccaacagaag
aaaaagtttggaggtcaggacatcttcatgacagaggaacagaagaagtactacaatgcc
atgaagaagctcggctccaagaagccccagaagcctattcccaggccaacgaatgcattc
caaggctgtgtgtttgacttcgtaacgaagcaggcttttgacattgtcatcatgatcctc
atctgcctcaacatggtcactatgatggtggaagaggatgaccagacaccagagagggaa
aaaatcctccactggattaactttgtctttatagtgctcttcactggggagtgtacgctc
aaaatgatatccctccgccattactacttcaccattggctggaacgtgtttgactttgtc
gttgtcatcctttcaattgtaggtatgtttttatcagaattgattgagaagtactttgtt
tccccaacgttattccgagtcatccgacttgccagaatcggccgcatcctccgtctcatc
aagggcgctaagggcatccggacgcttttgttcgccttgatgatgtcacttcctgccctg
tttaacattggcctcctgctcttcctggtcatgttcatctacgccatcttcggcatgtcc
aacttcgcctacgtcaagcacgaggcgggaatcgacgacatgttcaacttcgagacgttc
ggcaacagcatgctctgcctgttccagatcaccacgtcggcgggctgggacggcctcctg
gcgcccatcctcaacaagaaggagcccgactgtgacagccagatggagcacccgggcacc
ttataccggggaaactgcggcaacccgcctgtggccatgttctttttcgtcagctacatc
atcatctgtttcctcatcgtggtcaacatgtacatcgccgtcatcctggagaacttcagc
gtggccaccgaggagtcggccgagccgctgagcgaggacgactttgagatgttctacgag
gtgtgggagcgcttcgacccggacgccacgcagttcgtggagtacgacaagctgtcggac
tttgcagacgctttggacccaccgctgcgaatggccaagcccaaccacatccagctgatc
aaaatggatctgcccatggtcagcggggagcgcatccactgccttgacatcctgtttgcc
ttcaccaagcgtgtcctgggagagggcgaaggcttggacctcctccggggccagatggag
gagcgcttcatggcctccaacccctccaaagtctcctacgaacccatcaccagtaccctg
cggcgcaagcaggaagacatgtctgccttggtgatccagaggtcattcaggcgttacctg
gcccgactcgccctgaagaaagcagcagagctctacaaggagcagcctaaaggcagcgtg
atgtatgagctggaggacaaggaggtgctggtgataggacagttcgcggacaactccacc
tccacggagaaaacggacattacgcccaccaccgcctcgctgccttcgtacaacagtgcc
acaaacttggaaaaggaccaatatgagaaagaatag
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