Oncorhynchus gorbuscha (pink salmon): 124012333
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Entry
124012333 CDS
T07892
Name
(RefSeq) ATP-dependent DNA helicase Q4-like
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ogo03032
]
124012333
03400 DNA repair and recombination proteins [BR:
ogo03400
]
124012333
Enzymes [BR:
ogo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
124012333
DNA replication proteins [BR:
ogo03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
124012333
DNA repair and recombination proteins [BR:
ogo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
124012333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
Drc1-Sld2
zf-CCHC
ResIII
zf-CCHC_3
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
124012333
NCBI-ProteinID:
XP_046181787
LinkDB
All DBs
Position
LG24:53580766..53604949
Genome browser
AA seq
1564 aa
AA seq
DB search
MDRYNDVKILLKTWEQSFVQEHQRKPNKGDIDAAPEEAKKLYKEYRTLKQAKENGNNGHT
DPTPTAQTQSSEKESDCWGTHLNRKSMPVAAPKLTLTPKDKESLQASAQYFGMKLKSNLG
ALTKERPVSLKKSFTPRRTPLKSWKDGQSPNPAAGAAGSDTLLSPLLKPANTRPHLLACP
VQTSTEHPQQPFEPIPAFTPSTLWSPAAGASSSDRPAGSRAQQLRQTFTKRLSSVDSSWL
ERCQVFDEVGVAEKPVVGNLSLSVVSEVDSPPAKGGGVGEGENPGRAASSFVIPSMQKEG
TTLLGERASKSTMPQALPFSDEQQPKIGCGVTSAAVPASLRSTGQHSSLGSGSGEGKDGE
TRPGLRGQAEGGTSEETAIGASTAKKSRARARKGRVGRVEEKAEVSTQPPQKAEGDELGP
EKKGTKKKAKKRQRDLDTDGENPDDTEKGGAVKKRRTKKVTEATVDGRSPKKVPRVRKKK
AQTGDGNASEQWSGDVTEKEAVKQKPRVPQENLLGEVDEEDVKAARNRGSNTMRPKPTKN
SDCNFVRINLKNKSHVKGYACRGAGLRKQLTMEKFQLKGERFGGPDSRFRGGRGRGGFRG
GRGRGGFNHPGDTCFKCGGTGHWAMNCKGRVGAPVDSAAADEASAVEEPFELPTLEEVAR
ATGTLRSEPRVAPPIVREENEGLGEKQEDGGDEVLLNVIRPDYERLLPPPPMQPLYPLGE
DGKVQAVPSEVNEALKDFGYKSFRPGQEQAIMRILSGLSTLVVLSTGMGKSLCYQLPAYL
YAQRSNSITLVVSPLVSLMDDQLSGLPSKLKAAAIHSNMSKKQREVAIEKVKAGEVHVLL
LSPEALVGGGHSGSGCLPPADQLPPVAFACIDEAHCVSEWSHNFRPCYLRLCKVLRDRLG
VRCLLGLTATATLSTALDIAQNLGITDQDGVAVRSAAVPNNLQLSVSMDRDKDQALVCLL
KGERFGSLESVIIYCTRREETTRISALLRTCLQGVLLKESNRTASQEADDNPVGKKKKAL
ARKKIRKPLKWMAESYHAGMSSSERRRVQNNFMCGELRVVVATVAFGMGLDKSDVRGIVH
YNMPKSFESYVQEIGRAGRDGEPAHCHLFLDPEGGDLHELRRHIYADTVDYYTVKKMVQK
VFPPCRCRQIHQNQQDLARTQEEVDDSEMMELMDTCDENPVETPEHTTETGQNTPVEQLE
QAKVPTEDVSTFQPLDGEQKHPPESSVPFPQRGDGEHEEEEQTGGGDDWPTTRVCRTHER
AIPMQDTVEALDITEEGLETLLCYLELHPQQWVELLHPTLSTCKMVCYNGPHQLRKLTKI
CPPVAVVLARKRLAGERVDTCDSVDFDVVEVADTMGWQLGLVKRGLRQLQWATNRGVLVE
FSNLSFYFRSYGDLTPDEMDWVCEFLHGRVVAQERTKLYQLKACFKAFRSVAFKSCSVCT
DKLDESRSLKLKELLGDYFDKRRELDLSRKFQEEKDGEDEEELLLKCKMKDFEGQIRADI
QSFLGNRSDEKFSGRAVARIFFGIGSPCYPAQTFGRDKRYWRKYIQFDFNEIIRFAIQEI
IRFK
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atggatcgatacaacgatgtgaagattcttctgaaaacctgggagcagtcatttgttcaa
gaacatcaaagaaagcccaacaagggtgatattgacgcagccccagaagaggctaaaaag
ctctacaaagaatatcgaacactcaagcaagcgaaagaaaacggcaacaatgggcataca
gacccaacacctaccgcacagactcagtcatctgagaaggaatccgattgctggggcact
cacctgaaccgtaagagcatgccggtggctgcccccaaactaacgctgacgcccaaggac
aaggagtccctccaagcctcggcccagtactttggcatgaagctcaagtcaaacctgggt
gctctaacaaaggagagaccggtttctctgaagaagtcgttcacgccacgtcgaacacct
ctgaagtcctggaaagacggccagagcccaaaccctgcagctggtgctgcaggcagcgat
acactgttatcccctctgctaaagccagccaacacacgtccacacctcctggcctgtccc
gtgcagacatcgacagaacacccacaacagccctttgagccaataccagccttcacgccc
tccacgctgtggtctcctgcagcgggggcatcctcatcagacagaccggcaggaagtagg
gcccagcagctcagacagaccttcaccaagaggttatcctctgtagacagcagctggctc
gagagatgtcaggtgtttgacgaggtgggtgtcgcggagaagccggttgtgggtaatttg
tctctctccgtggtgtcggaggtagattcaccaccggccaaagggggaggtgttggcgag
ggagagaacccaggacgtgccgccagttcctttgtcataccttccatgcagaaagaaggg
acaactctcctgggggagagggcttccaagagtaccatgccacaggctctgcctttttca
gacgagcaacagcccaaaattggttgtggcgtaacgtctgcagcagtcccagccagtctg
cggtccactggacaacactcctcattggggtctggctccggagagggaaaggatggagaa
accagaccaggtctcagaggacaggccgagggcggaacgtcagaagagacagccatcggc
gcctccaccgccaagaaatctcgagcaagggccagaaagggccgggtaggaagggttgaa
gagaaggcggaggtgtcgacgcagccaccacagaaggccgagggtgacgagctcgggccg
gagaagaaaggtacgaagaaaaaggccaaaaagaggcaaagggaccttgacacagatgga
gagaaccctgacgacacagagaaagggggggcggtgaaaaagaggagaaccaaaaaggtt
acagaggctacagttgatggcaggagtcccaaaaaagtccccagagtgaggaagaagaag
gctcagacgggtgatggaaatgctagcgagcagtggagcggtgatgtcacagagaaggaa
gcagtgaagcagaaaccaagggttccacaggagaacctcctaggagaggtggatgaggaa
gatgtcaaagctgccaggaacagagggagcaacactatgagacctaaacccaccaagaac
tcggactgtaactttgtaaggatcaacctgaaaaataagtctcatgtcaaaggatacgca
tgtaggggcgctggcctacggaagcagttgaccatggagaagttccagctaaagggggag
aggtttggaggaccagactcgcggtttagagggggaagaggcagaggagggtttagaggg
ggaagaggcagaggagggttcaatcatccaggggacacctgcttcaagtgtggaggcaca
gggcactgggctatgaactgcaagggcagagttggagctccagtagacagtgctgctgct
gatgaggcgtctgcggttgaggagcccttcgaactgccaaccttggaagaagttgcccgg
gcaacgggaactctacgttccgagcctcgggtggcgccccccattgttagagaggagaat
gagggtctgggggagaagcaggaggatggtggtgatgaggtcttgttgaatgtgatcagg
ccggattacgagcgcctgctccctccgccccccatgcagcccctctaccccctaggggag
gacggcaaagtacaagcggtgccctctgaagttaatgaagcacttaaagactttgggtac
aagtctttcagaccagggcaggaacaggccatcatgagaattctatcaggtctgtccacg
ctagtggtgctttctacaggcatgggcaagtctctgtgctaccagctgcctgcctacctc
tatgcccagaggtctaacagtatcactctggtggtgtcaccacttgtgtctcttatggat
gatcagctttctggactcccatccaagctgaaagcggctgccattcactccaatatgtct
aaaaaacagagagaggttgccattgagaaggttaaggcaggtgaggtccatgtcctgctc
ctgtcccctgaggcgttggtaggtggaggtcactctggctctggctgtcttcccccagct
gaccagctccccccggtggccttcgcctgtatcgacgaggcccactgtgtctcagagtgg
tcacacaactttaggccctgctacctgcgtctctgcaaggtgttgagggaccgtctgggc
gtgcgttgcctgttgggtctgactgccaccgccaccctgtccacagccctggacatcgct
caaaacctgggcatcactgaccaggacggtgttgctgtccgctcagccgcagtgcctaac
aacctgcagctgtctgtctccatggaccgagacaaggaccaggccctggtgtgtctgctg
aagggtgagcggtttgggtctctggagtccgtcatcatctactgcaccaggagagaggag
acgacccgtatatctgccctgctcaggacctgcctgcagggggtgctgttgaaggagtct
aaccgtacagctagtcaggaggcagatgacaaccctgtagggaagaagaagaaagctttg
gccaggaagaagatccgtaagcctctgaagtggatggctgagtcctaccatgccggcatg
tcgtcctccgagcgccgtcgcgtccagaacaacttcatgtgtggtgagctgcgagtggtg
gtcgccacggtagccttcggcatgggcctggacaagtcggacgtgcgcggaatcgtgcac
tacaacatgcccaagagctttgagagctacgtgcaggagatcgggagggcagggagagat
ggggaaccggcccactgtcatctcttcctggatcctgagggaggggacctgcatgagttg
cggaggcacatctatgccgatacggtggattactatactgtgaagaagatggtgcagaag
gtgtttcctccctgcaggtgtagacagatccaccagaaccagcaggacctagccaggacc
caggaggaggttgatgactccgagatgatggaactgatggacacctgtgatgagaaccca
gttgaaacaccggaacacacaacagagactggtcagaacacccccgtcgagcagttggaa
caggccaaagttcctactgaggatgtatcaacttttcaaccactggacggagagcagaaa
cacccaccagagtcaagtgttccatttccccagagaggggatggcgaacatgaagaggag
gagcagacagggggaggtgatgattggcccacgactagggtgtgtcgcacccatgagagg
gccatacctatgcaggacactgtggaagccctggacatcactgaggaaggtttggagact
ctgctgtgctatctggagctgcaccctcagcagtgggtagagctgctccaccccaccctc
tccacctgtaagatggtctgttacaacggcccgcatcaactccgcaaactcaccaaaatc
tgcccacctgttgccgtagtgttagcccgaaaacggctggcaggggagcgagtggacacc
tgtgattcggtcgactttgatgtggtggaggtggcagacactatgggctggcagctgggt
ctggtgaagagaggcctcagacaactacagtgggccacaaacagaggagtcttggtggag
ttctccaacctgtccttctacttccgttcctatggtgatttgaccccggatgagatggac
tgggtgtgtgagttcctgcatggcagggtggtggcccaggagaggaccaaactgtaccag
ctcaaagcctgcttcaaggccttccgcagcgttgcattcaagagctgcagtgtctgtacg
gacaagctggacgagagcagaagcctgaagctgaaagagcttctgggggattactttgat
aagaggagagaactggacctgagcaggaagttccaggaggagaaggatggcgaggacgag
gaggagctgttgttgaaatgcaagatgaaggacttcgagggtcagatcagagcagacatt
cagagtttcctgggcaaccgcagtgatgagaagttctctggcagagccgtcgctagaata
ttctttggaattgggagtccatgttacccagctcagaccttcggcagggacaagagatac
tggagaaaatacatccaatttgattttaatgaaatcatccgctttgctattcaggagatc
attcgattcaagtga
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integrated database retrieval system
