Oncorhynchus gorbuscha (pink salmon): 124015044
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Entry
124015044 CDS
T07892
Name
(RefSeq) sodium channel protein type 4 subunit alpha B-like isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogo04040
]
124015044
Ion channels [BR:
ogo04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
124015044
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GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ
Zip
GPHH
Motif
Other DBs
NCBI-GeneID:
124015044
NCBI-ProteinID:
XP_046185873
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Position
LG26:22987398..23046422
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AA seq
1903 aa
AA seq
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MVALLPPTGTEVFRRFTLESLAEIERRMAEEAEEQERKKALNIEVAEEDLPKPAVDLEAG
KALPFIYGDPPPELFNTPLEELDPFYKSHKTFIVITKGNTIFRFNAEPACYILTPFSILR
RGSIKILIHSLFSMFIMLTIMSNCVFMTMSDPPAWSKTVEYVFTGIYTFEATIKVLSRGF
CVGDFTFLRDPWNWLDFMVISMAYLTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVG
ALIQSVKKLADVMILTVFCLAVFALVGLQLFMGNLKQKCVYWPPVEWRLNSTNMDNITMA
FNDTSGLNDVMDYNGTNSSNSTWDFKAYIDDKVNHYFLPGMLDPLLCGNASDAGNCPEGY
TCMKAGGNPNYGYTSYDSFGWAYLALFRLMTQDFWENLFQLTLRSAGKTYMIFFVVVIFL
GSFYLINLILAVVAMAYAEQNEATMAEAKEKEEEYAMIMVQLKERREAEVKERHDRHHEH
HEHAEIAGSQSSLSGRTSKKEKVEKTDEEVADDEACTSSSLYSEAIKDSNGGLMISANAN
KVLTDQESAVVLKRASGPKGSKDQLEVVGLQKKTPSSSSVYSQDDMDDLEEELRPCPPCW
YKCSDIFLKWNCCVPWVTFKKWMYFIVMDPFVDLGITICIVLNTMFMAMEHYPMTPEFEE
VLSVGNLVFTGIFTAEMVLKLIAMDPYYYFQVGWNIFDSIIVTMSLVELGLANVEGLSVL
RSFRLMRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKE
CVCKISLDCELPRWHMHDFFHAFLIIFRVLCGEWIETMWECMEVAGQGMCLVVFMMVMVI
GNLVVLNLFLALLLSSFSGDNLAAPEEDGEMNNLQIATGRITKGIDWAKAYVIQQFCIII
GKQPKEDGDGADGNGGSNGDVDGLPKGSLALKNIISSDNPKADLELTMLDVWIDDVNPSG
FLTNDNLTLDVPIAKMESDDDEDDISEEEEGEGANGDAKEDTELKKPIAPDNASSICSTV
DNPPEVEEEEEEEADTTNPENCWTEKCIGRCPCLDFDITAGKGKTWWNFRKTCFLIVEHN
YFETFIIFMILMSSGALAFEDIYIEQRRTIKIILEYADQVFTYVFIIEMLLKWVAYGFQA
YFTNAWCWLDFLIVDVSLISLTANILGYAELGPIKSLRTLRALRPLRALSRFEGMRVVVN
ALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKYYYCFNTTSEERFSADVVNNKTECYQ
LMEGNDDVRWMNAKVNYDNVGMGYLSLLQIATFKGWMDIMYGAVDSRFVEDQPIYEDNVY
MYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLGSKK
PQKPIPRPENKFAGLIFDLITQQFFDIFIMVLICLNMVTMMVETDGQSKEKEDILFLINL
VFIIVFTTECILKLIGLRQYFFSVGWNIFDFVVVILSIVGLLLADLIEKYFVSPTLFRVI
RLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKE
AGIDDMFNFETFGNSIICLFMITTSAGWDSLLSPILNSRAPDCDPDVENPGTDVRGNCGS
PGLGICFFCSYIIMCFLVVVNMYIAIILENFNVATEESGDPLCEEDFEMFYETWEKFDPD
ASQFIAYDILSEFCDTLKDPLRIPKPNAIKLITMDLPIVPGDKIHCLDILLALTTEVLGE
SAEMDAMKESMEEKFMANNPSKVSYEPITTTLRRKREEVAAVVIQRAYRKHLLRRSLKLA
SYKYREKKALTKEDEAPPETEGMIAIRMNKLYGSQQSLGVDETVVDMDSHEKRESKELTE
TQPPVETTEEPLPVELQNEIILHSAPFVIPASIRISQLKESDV
NT seq
5712 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccctgctccctcccacaggcaccgaagtgtttcgccgcttcacccttgagtcg
ctggcggagatcgagaggcggatggccgaggaagcagaggagcaggagagaaaaaaggcc
ctgaacattgaggtggcagaggaggacctgccaaagccagccgtcgacctggaggccgga
aaggccctgccattcatctacggagacccgccacctgagctgttcaacacgcctctggag
gaactggatcctttctacaaatcacacaaaacctttatcgtcatcaccaaagggaataca
atcttcaggttcaacgctgagcctgcctgctatattctaacacccttcagtattctcagg
agaggatccatcaaaattctcatacattcattatttagcatgttcatcatgttaacaatc
atgtccaactgtgtgttcatgacgatgagtgaccctccggcatggagtaaaactgttgaa
tatgttttcactggtatctatacctttgaggcaacaattaaagtgttgtccagaggcttc
tgtgttggagatttcacattccttcgagatccatggaactggctggattttatggtgatc
agcatggcgtacctcacagagtttgttgacctgggcaacgtgtctgccctcaggacgttc
cgtgtgctccgagctcttaaaacaatcactgtaattcccggtctgaaaaccattgtgggc
gctttgatccagtcagtgaagaagctggctgatgtgatgatcctaacagtgttctgcctg
gctgtgttcgctctggtcggccttcaactgttcatgggaaacctgaagcagaagtgtgtt
tactggccccctgtggaatggcgtttaaactctaccaacatggacaacatcactatggcc
ttcaacgacaccagtggtttaaatgacgttatggactacaatggcacaaacagcagcaac
agtacgtgggacttcaaggcatacatcgacgataaagtgaaccattacttccttcctgga
atgttagaccctcttctttgtgggaacgcttctgatgctggaaattgccctgaaggatac
acgtgtatgaaggccggagggaatcccaactatggatacacaagctacgacagttttgga
tgggcctaccttgccctatttcggctcatgacacaggacttctgggaaaatctattccag
ctgactcttcgctcagcagggaaaacctatatgattttctttgtggtggtgatcttcctg
ggctcgttctacctgatcaacctgatcctggctgtggtggccatggcgtatgccgagcag
aacgaggccaccatggccgaggccaaggagaaggaggaggagtatgccatgatcatggtg
cagctgaaggaaaggagagaagcagaggtcaaagagagacatgacaggcatcatgaacac
catgaacacgctgaaattgctggcagtcagtcgtcactgtccggtagaacatctaagaaa
gagaaagttgaaaagacagatgaagaggttgctgatgatgaggcgtgtacgtcctccagc
ctttatagcgaggctataaaggactccaatggaggcctcatgatcagtgccaatgccaac
aaggtcctgacagaccaggagtctgctgttgtgttgaagagggccagtggacccaagggg
agtaaggaccagctggaagtagtaggcctgcagaagaagacacccagttcatccagtgtc
tacagccaagatgacatggatgatttggaggaggaactgagaccttgtccgccttgctgg
tacaagtgttcagacatcttcctgaaatggaactgctgcgtgccctgggtgactttcaag
aagtggatgtacttcatagtgatggacccattcgtggacttgggtatcaccatctgcatt
gtactcaacaccatgttcatggccatggagcactaccccatgacgccagagtttgaagaa
gtgctgagtgtggggaacttggtcttcacaggaatcttcacagcagagatggtgctgaag
ctcatcgccatggatccgtactactacttccaggtcgggtggaacatctttgacagcatc
attgtgacaatgagcctggtggagctggggctggccaacgtcgaaggtctatccgtgcta
cgttccttccgtctgatgcgtgttttcaagctggccaaatcctggcccacactcaacatg
ctaatcaagatcattggtaattcagtgggcgcactgggtaacctcaccctggttctggcc
atcatcgtcttcatcttcgccgtggtgggcatgcagctcttcggcaagagctacaaagag
tgtgtctgcaagatctccttggactgcgagctgccccgctggcacatgcatgacttcttt
cacgcttttctcatcatcttccgggtgctgtgcggagagtggatcgagaccatgtgggag
tgcatggaggtggccggacagggcatgtgtctcgttgtcttcatgatggttatggtcatc
ggtaacctagtggtgttgaacctcttcttggccttgctgctgagctcgttcagcggtgac
aacctggcggctccagaggaggacggggagatgaacaacctgcagatcgccaccggcagg
atcaccaaaggcatcgactgggccaaggcctacgtcatccagcagttttgcattatcata
gggaagcagcctaaggaggatggagatggggctgacggtaatgggggtagtaatggggat
gtggacggcctcccaaagggcagcttggctttgaaaaatataatctccagtgacaaccca
aaggctgatttggagctcacaatgcttgacgtttggatagatgatgttaacccaagtgga
tttcttacaaatgacaatttgaccctggatgtacctattgccaaaatggagtcggatgat
gatgaggatgacatctctgaagaggaagaaggagaaggtgcaaatggagatgctaaagag
gatactgagttaaagaaacctattgcaccggacaatgcctcttcaatatgcagcacagtg
gacaatccccctgaagtggaagaagaggaggaagaagaggcagacaccaccaaccctgag
aactgctggaccgagaaatgcattggacgatgcccgtgccttgattttgacatcaccgcg
ggcaaaggaaagacttggtggaacttcaggaagacatgcttcctcattgtggagcacaac
tactttgagaccttcatcatcttcatgatcctgatgagcagcggcgctttggcctttgaa
gacatatacattgagcagcgcaggaccataaaaatcatcctggaatatgctgatcaagtc
ttcacctacgtgttcattattgagatgctcctgaagtgggtggcttacggattccaggcc
tacttcacaaacgcatggtgctggctggacttcctcattgtggatgtgtctttgattagc
ttaacggctaacatcctgggctatgctgaacttggaccaatcaaatctcttcgaacttta
agggccttgcggcccctccgcgccctgtccagatttgagggaatgagggtggtggtgaat
gctctggtaggggctattccttccatcttcaacgtgcttctagtgtgcctcatcttctgg
ctcatcttcagcatcatgggtgtaaacctgtttgctgggaagtactactactgcttcaac
accacgtctgaggagaggttctctgctgacgttgtgaataacaagaccgaatgctatcaa
ctaatggagggtaatgatgacgtgcgctggatgaatgcaaaggtcaactatgacaacgtg
ggcatgggctacctctccctcctgcaaatagcaacgtttaaaggatggatggatataatg
tatggcgctgtggattcacgttttgtggaagaccagcccatatatgaggataatgtttac
atgtacatctactttgtcatattcatcatctttgggtccttcttcaccctgaatctcttc
attggtgtcattatcgacaacttcaaccaacaaaaaaaaaagtttggagggaaagacatt
ttcatgacagaggaacagaagaaatactacaatgccatgaaaaagcttggttccaagaag
ccacagaaacccattcctagacccgagaacaaatttgcaggccttattttcgacctaatc
acccaacaattcttcgacatcttcatcatggtgctgatctgcctcaacatggtaacgatg
atggtggagacggacggccagagcaaggagaaggaggatatactcttcctcatcaacctg
gtgtttatcatcgtcttcaccacagagtgtatcctcaagttgatcggactgcgacaatat
tttttttccgtcggatggaatatttttgattttgtcgtcgtcattctctccatcgttggt
ttactgctggcggacctcatagagaagtattttgtctcacctacccttttccgtgtcata
agactggccaggattggtcgagttctgagactcatccgaggagctaaaggcatccggaca
ctgttgtttgccctgatgatgtcacttcctgctctcttcaacattgggctcctgctcttc
cttatcatgtttatcttctccattttcggaatgtccaactttgcgtatgtcaagaaggag
gccgggatagacgatatgttcaattttgaaacttttggaaacagtataatttgtctgttc
atgatcacaacctcagccggttgggatagtctcctctcacccattctaaatagtagagct
ccggactgtgacccggacgtggaaaatcccggcacagatgtaagaggcaactgcggcagc
cctggtttgggaatttgttttttctgcagctacatcatcatgtgtttccttgttgtggtc
aacatgtacattgccattatcctcgagaacttcaatgtggccacagaggagagtggcgac
cctctgtgtgaggaagacttcgagatgttctacgagacctgggagaagttcgaccctgac
gcgtcacaattcatcgcctacgacattttgtcggagttctgtgacacgcttaaagacccg
ctcagaatccccaaacccaacgcaatcaagctgatcaccatggaccttcccattgtccct
ggggataagatccactgtctggacatcctgctggcgctgaccacagaggtgctgggagag
tcagcggagatggatgccatgaaagaaagcatggaggagaagttcatggccaacaacccc
tctaaagtgtcatacgagccaatcaccaccaccctgaggcgaaagcgggaggaggtagca
gctgttgttattcagagagcctatcgtaagcatctgctgagacgttcattgaaactcgct
tcctacaagtaccgcgagaagaaagcgttaaccaaggaggacgaagcgccgccagagacg
gagggaatgattgccatcaggatgaacaaactgtatggaagccaacaatcactcggagtg
gatgaaacagttgtagatatggattctcatgaaaagcgggagagcaaagaactgacagag
acacaacctcctgtggagactactgaagagccgctgcctgtggagcttcagaacgagatc
atcttgcactctgccccctttgtcatcccggcctcaatccgtatctcacagctgaaagag
tccgatgtttga
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