Oncorhynchus gorbuscha (pink salmon): 124015623
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Entry
124015623 CDS
T07892
Name
(RefSeq) low-density lipoprotein receptor-like
KO
K12473
low-density lipoprotein receptor
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124015623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124015623
Membrane trafficking [BR:
ogo04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
124015623
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GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
DUF5050
EGF_3
EGF
hEGF
Gemini_mov
Motif
Other DBs
NCBI-GeneID:
124015623
NCBI-ProteinID:
XP_046186938
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Position
LG26:3330249..3352398
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AA seq
877 aa
AA seq
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MLPTRVGITGLTACCLVLLSHCFAPTDAAYTCGTSQFRCGNGKCITSRWVCDGGDDCGDG
TDELPAACEAKTCLPTEFSCGGPLNKCISGTWHCDGKADCDNGADEKGCAAKNCTDNEFR
CSNGQCIAVSFVCDKDNDCSDGSDETSCPTATCGPNAFQCNNTVCVPRLWACDGDAGCAD
GSDEWPQNCGGRDTKPTTKPCGPHEFHCGSGECIHRSWSCDGGKDCQDNSDETNCSRPTC
QPDEFQCNDGSCIHGSRQCDRQFDCRDLSDEMDCKSVDACEGPNSFRCKSGECITVDKVC
NGKKDCRDMSDEPIRECGNNECLTNNGGCSHTCTDLKIGFNCSCPAGYSLGKDNRKCEDI
DECADPDTCTQICVNILGSYKCECEEGYELDPKTKTCKAATGTVPYLLFTNRHEVRKMTL
DRREYVPLIPRLKNVVALDMDMPGHKIFWSDLYHRKIYSADMNLAGNSSHHNVVIDSQME
VPECLAVDWIHGNIYWTDSELQTISVATTDGTRRKTLISEGLEKPRSIVVDPANNFMYWT
DWGNEAKIEKSGLNGADRVALVTDNIMWPNGITLDMVNQRLYWVDSKMHTLSSIGVNGEG
RHTLIYNEDKLAHPLSLAVFEEKVFWTDMGDRAVMSANRLTGNDITVLAEDLMQPEDIIV
YHNLKQPIGKNWCTEKNFVNGGCEFLCLPAPQINQHSPKYTCACPDHMTLGLDMRKCVAA
PTTTAPSTTPKTATPIPTRVPTKQPAGPTSTTTTTTTTTSSARRAQPQDPDRSSTTHSPQ
ETAVTGQSGYVAMPKVAEASHHTVLYIVLPIMMMCLVLFGAVLLWRHWRLKNTNTIHFDN
PVYQKTTEDELHICRNHSQDGYTYPQRQMVSLEEDLA
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgctaccgactcgtgtgggaatcaccgggctgacagcatgttgcctggtgttgctctcc
cactgttttgctcctacagatgctgcgtatacatgtgggacaagtcagttcaggtgtggc
aacgggaaatgtatcaccagccggtgggtgtgtgacggaggtgatgactgtggtgacgga
actgacgagctgccagccgcctgtgaggctaagacctgcctgcccactgagttcagctgc
ggaggcccactgaacaagtgtatctccggaacgtggcactgtgatggcaaagctgactgt
gacaatggagctgatgagaagggctgtgccgcaaagaactgcaccgacaacgagttccgc
tgctccaacggtcagtgcatcgccgtctccttcgtgtgcgacaaggacaacgactgttcc
gatggttctgacgagacttcctgtcccaccgccacctgcggtcccaacgccttccagtgt
aacaacactgtgtgtgtcccgcgtctctgggcctgcgacggcgacgccggttgtgccgac
ggttcagacgagtggccccagaactgtggcgggagggacaccaaaccgacaacaaagccc
tgtgggccacatgaattccactgtgggagtggggagtgtatccataggagttggagctgt
gatggaggcaaggactgtcaggataattcagatgaaaccaactgcagtcggcccacttgc
cagccagatgagtttcagtgtaatgatggctcctgtatccatggtagccgtcagtgtgac
cgccagtttgactgcagggatctgagtgatgagatggactgcaagagcgtggatgcgtgt
gagggcccgaatagcttcaggtgtaagagtggggagtgcatcaccgtggacaaggtgtgc
aacgggaagaaagactgccgagacatgtccgacgaacctatcagggagtgtggcaacaac
gagtgtttgaccaataacggcggttgctctcacacctgtaccgacctgaagattggcttc
aattgctcctgtcctgctgggtacagtctggggaaggacaacaggaaatgtgaagacatt
gatgagtgtgctgacccagacacctgtacccagatctgtgtgaacatcctgggaagttac
aagtgtgagtgtgaggagggctatgaactggaccccaagaccaagacctgcaaggctgcc
acaggtactgtcccctacctgttgttcaccaaccgccacgaggtgaggaagatgactctg
gaccgtagagagtatgtccctctcatccccagactgaagaacgtggtggccctggacatg
gacatgcctggacacaagatcttctggtctgacctgtaccacaggaagatctacagcgcc
gacatgaacttggcagggaactcctcccaccacaacgtggtgattgacagccagatggag
gtgccggagtgcctggccgtcgactggattcacggtaacatctattggacggacagtgag
ctccagaccatctccgtggcaacaacggacggaacacggcgaaagacactgatcagcgaa
ggactggagaaaccaagaagcatcgtggtggacccagccaataacttcatgtactggact
gactggggcaacgaggccaagatcgagaagagtgggctgaacggagccgaccgcgtcgcc
ttggtaacggacaacatcatgtggcccaacggcatcactcttgacatggttaaccagcgt
ctgtactgggtggactctaagatgcacaccctctccagcatcggcgtaaacggagaagga
cgacacacactcatctacaacgaggacaagctggctcaccccctctctctcgccgtcttc
gaggagaaagtattctggaccgacatgggcgacagagcggtcatgagcgccaaccgcctg
acaggaaatgacatcactgtactggcggaggacctgatgcagccagaggacatcattgta
taccacaacctcaagcagcccatcggaaagaactggtgcacagagaaaaactttgtgaat
ggaggttgtgagttcctatgtctacctgctccccagatcaaccaacactcccccaaatac
acctgtgcctgtcctgatcacatgaccctcggcctggacatgaggaagtgtgtggcagct
ccaacaactaccgctccctccaccactcccaaaactgcaactcccatccctaccagggtc
ccaaccaaacagccagctggtcccacttccaccacaactacaactaccacaactacctcc
tccgcccgccgggcccagcctcaggaccctgataggtcctcgaccactcacagtccacag
gaaactgcggtcacaggtcaaagtggctatgttgccatgcccaaagtagctgaggcatca
caccatactgtgctctacattgtcttacctatcatgatgatgtgcctggtgctgtttggt
gcagtgttgctatggagacactggaggctgaagaacaccaacaccatccactttgacaac
cccgtgtaccagaagaccacagaggacgagttgcacatctgtagaaaccacagccaggac
ggatacacctacccacagagacagatggtgagcctggaagaagacctggcgtga
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