Oncorhynchus gorbuscha (pink salmon): 124015707
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Entry
124015707 CDS
T07892
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA1-like
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
124015707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124015707
Membrane trafficking [BR:
ogo04131
]
Endosome - Golgi transport
Others
GGA
124015707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VHS
GAT
Alpha_adaptinC2
GGA_N-GAT
Hrs_helical
PCRF
Elf4
Motif
Other DBs
NCBI-GeneID:
124015707
NCBI-ProteinID:
XP_046187073
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All DBs
Position
LG26:complement(34233731..34240024)
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AA seq
688 aa
AA seq
DB search
MRQCQLPSCPSSTHHCRGGEKGSSQSCPSRDTFMVKRIPVVMAASPDTDSLEARINKATN
PLNRDTDWDSIQAFCDQLNNDLEGPQLATRLLAHKIQSPQEWEAMQTLVVLETCMKSCGE
RFHSEVGKFRFLNELIKVVSPKYLGTRAPEPVKKKVLELIYSWTLGLPDEAKIADAYQML
KKQGIVKQDPVLPADKLLLLPPPRPKNAIFEDEEKSKTLTRLLNSTHPEDLKAANKLIQE
MVQEDQKRAEKLSKRVNAIQDVNESVSLLTQLLEDYDRTTNPQSNAELIQDLYQRCEKMR
PTLFRLASDTEDNDEALAEILQANDSLTQVINLYRQQVKGEVVNGNNSANTRRLTGSSVA
LLDLSGLDTSPPSYPEFPTPTDSLNASSQEMGISLLDDELMSLGKGTHTSNPASQPEDST
AWDSFQSSDSVDITDIPAAPSVLLSPDRLPYTQPLSTGATSGSSALDELDLLGKKLLQQS
LPPEGLQVKWDKPPFKPTLRDLQNKSGSNPSPIPAFSPEHPVALQGDRLLDTSPVHTVIP
PIEMTLTDVFVPLESIKPSNLLPVTVFDSHSLRVLFHFARDTPSSLADVLVVIISMLSSA
PVPVSNILFQPSVPDTMRVKLQPPSGTELPAFNPILPPAAITQVLLLANPHKEKVQLQYK
LTFMLGEEDYDERGVVAQFPPSDTWGNL
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgcgacagtgccagctgccatcgtgtccatcatccacccatcactgtcggggaggtgag
aaggggagctctcaaagttgtccctcgcgagacacgttcatggtaaagagaattcccgta
gtgatggcggcgtcgcctgacacggacagtttggaggcacgtatcaacaaggccacaaac
ccactgaacagagacacagattgggacagcatccaggccttctgtgaccagctcaacaat
gatttggagggaccccagctggccaccaggctactggctcacaagatccaatcacctcag
gagtgggaggccatgcagacactcgtggtgctggagacttgcatgaagagctgtggggaa
aggttccacagtgaggtgggcaaatttcgcttcctcaacgagctcatcaaagtggtctct
ccaaagtacctcggcacccgggctccagagccagtgaagaagaaggtgttggagctcatc
tatagttggacactggggctgcctgacgaggcaaagatcgctgatgcctaccagatgctt
aaaaaacagggcattgtcaaacaggacccagttcttccagctgacaaactcctcctgctt
ccacctcccagaccaaaaaatgccatatttgaggatgaggagaagtcaaagacactgact
cgcctgttgaacagcactcaccctgaggacctgaaagcagccaacaaactgatccaggaa
atggtgcaggaggaccagaagcgggcggagaagttgtccaagcgtgtgaacgccatccag
gatgtgaatgagagtgtcagcctactgactcagctgctggaggactatgaccggaccacc
aacccacagagcaatgcagagctcatccaggacttgtaccagcgctgtgagaagatgaga
cccacattgttcagactggccagtgatacagaggacaatgatgaggctctggcggagatc
ctccaggccaacgacagcctgactcaggtcatcaacctgtacaggcagcaggtgaaggga
gaggtggtgaacgggaacaactcagctaatacgcgaaggctcacaggaagtagtgtggcg
ctacttgatctatcgggattggacacgtcacctccttcctacccagaattccccactcca
acagacagcctaaatgcttcctctcaggagatgggcatcagtctccttgacgatgagcta
atgtcactgggtaaggggacccacacctccaacccggcctcccagcctgaggactctacc
gcctgggactctttccagtcttctgacagtgtggatattactgatatcccagcagcgcct
agtgtactactgagtccagatcggctcccctacacccagcctctttctactggagccacg
tctggaagctcagctttagatgagttggatctgctggggaagaagctgctacagcaatcc
ctacctccagagggcctgcaggtcaaatgggacaagcctccgttcaaacctactctacga
gatctccagaacaaatctggaagtaatccaagtcctatcccggccttctcccctgagcac
ccggtggctctccaaggtgataggttgttggacacctctccggttcacacagttattccc
cctatagaaatgaccctgacagatgtttttgtgccacttgagtccattaagcccagcaac
ctgttgcctgtgacggtgtttgatagccacagtttgcgggtgctcttccactttgcacgt
gacactccgtcctctcttgctgatgtgctggtggtgatcatctccatgctctcttccgcc
ccggttccagtcagcaacatcctctttcagccctctgtccctgacacaatgagagtgaag
ctacagcccccatcaggaacagagcttccagccttcaacccaatcctcccacctgctgcc
atcacacaggtcctgctgctggccaaccctcacaaggagaaggtgcagttgcaatacaag
ctaaccttcatgctaggagaggaagactatgatgaaagaggagttgtagcccagtttcca
ccttcagacacatggggcaatctgtaa
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