Oncorhynchus gorbuscha (pink salmon): 124047585
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Entry
124047585 CDS
T07892
Symbol
tap2t
Name
(RefSeq) antigen peptide transporter 2
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo02010
ABC transporters
ogo04145
Phagosome
ogo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124047585 (tap2t)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124047585 (tap2t)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124047585 (tap2t)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ogo02000
]
124047585 (tap2t)
Enzymes [BR:
ogo01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
124047585 (tap2t)
Transporters [BR:
ogo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
124047585 (tap2t)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_22
RsgA_GTPase
AAA_30
Rad17
AAA_29
AAA_16
KIF21A_4th
DUF3450
Motif
Other DBs
NCBI-GeneID:
124047585
NCBI-ProteinID:
XP_046223856
LinkDB
All DBs
Position
LG11:complement(21722834..21732912)
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AA seq
713 aa
AA seq
DB search
MAHLKTYGLVLLYDLVLWGALWTGLVLLEFSSSGGLVGLWAFGALRWALHHSITLVLSER
KPQPVLRRWVAVLCLLPPVFESGRMVMVPASTADDLGLVPGPSMVVLALVSSTVACLAWE
LGFPDDVGNQGKEKKKKQEARAQLMRVVRYCKPDALYLAAAFLFLSLAVICETFIPYYQG
KVIDTLSGQYQHNSFMYAIGGMGLVSLGSALCSGLRGGLFMCSLSRLNKRMRHMLFHNLV
QQDIPFFEENKPGSLVSRLGYDVDKMGRSVALNSNVLVRSLVKTAGMLFLMLGLSWQLTL
LTIVEMPLLTLLQTKYNTYNQEFIKQLQDCQAQIKELASQAIGAVRTVRSFRAEEKELDR
YNQALERMYKVQEHKGIISAIHLLLRRVVTVGLKVAMLFLCRRLISAGQLSIGSVLAFVL
FQKDMVTNMKQLVYVFGDMLCTVGAAAKVFTFLDRKPDQKEAGELAPAKLQGKLAFHHVS
FYYPSRQNTPALKAVSLELHPGKMTALVGPSGGGKSSCVSLLARLYEPKDGQVLLDGQPL
HCYQHQYLHQKMALVSQEPVLFSGSIRHNIEYGLVGCTLEKVKGAAKSANIHDFICTLEQ
GYNTDVGECGGQLSSGQKQCIAIARALVREPQVLILDEATSGMDINTQHAVQGVLAGSVG
LTVLVVAHRLQTVEKADHIIFMEGGEVVEQGTHQELMASKGRYRRLKEKLFED
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggctcatttaaaaacatatgggctggtccttctctatgacctcgtgctgtggggggca
ctgtggactgggttagtgctacttgagttctccagtagtggaggactggtggggttatgg
gcctttggagccctaaggtgggcattgcaccactcaatcaccctggtgctttctgaaaga
aagccccagccagtgctgaggagatgggtggcagtgctctgcctcttacctcctgtgttt
gaaagtggacgtatggtcatggtgccggcatcgactgccgacgacctgggtctggtgcct
ggcccaagcatggtggtcttggccctggtatcctccactgtggcctgcctggcatgggag
ctgggcttccctgatgatgtagggaaccaagggaaggagaagaagaagaaacaggaggcc
agggcacagttgatgagggtggtgcgatactgcaaaccagacgccctctacctggctgca
gccttcctcttcctcagcctggctgtcatctgtgagacgtttatcccttactaccagggg
aaggtcattgatacactgagtggtcagtaccagcacaacagcttcatgtacgccattgga
ggcatgggactcgtctcactaggaagtgctctgtgctcaggcctgcgagggggcttgttc
atgtgtagcctgtccagactcaacaagaggatgagacacatgctgttccacaacctggta
caacaggacatacccttctttgaggagaacaaaccaggaagccttgtctcacgcctcggc
tatgatgtggacaagatgggacgctctgtggctctgaacagtaatgtgctggtgcgcagc
ctggtgaagacggctggtatgctgttcctgatgctgggcctgtcctggcagctcaccctg
ctcaccatagtggagatgcccctcctcaccctgctgcagaccaaatataacacatacaac
caggagttcattaagcagctgcaggactgccaggcccagatcaaggagctggcatcccag
gccattggggcggtgagaacggttcgcagcttcagagctgaggagaaggagctagatagg
tacaaccaagcactggagaggatgtacaaggtccaggagcacaagggcatcatcagtgcc
atccaccttttactgagaagggtggtgacagtgggcctaaaggtggccatgctgttcctg
tgtcggaggctcatctcggctggccagctgagcattggcagtgtgctggcttttgtcctc
ttccagaaagacatggtgaccaatatgaagcaacttgtgtatgtctttggagacatgctg
tgcactgtcggggcggcagccaaggtgttcacatttctggacagaaagccagaccagaaa
gaagcaggagagctggctcctgcaaagcttcaggggaaacttgctttccaccatgtcagc
ttctactatccctcacgccaaaatacacccgcactgaaggctgtgagtctggaactgcat
ccggggaagatgacagcgctggtggggccctctggtggcgggaagagctcctgcgtcagc
ctgctggcgaggttgtatgagcccaaggacggccaggtgctgttggatggacagcccctg
cactgctaccagcaccagtacctgcatcagaagatggccctggtgtcccaggaaccagtg
ctcttctctggatctatcagacacaacatagagtacggcctcgtgggatgcaccctggag
aaggtgaaaggggctgcgaagagcgccaacatccacgactttatttgtacgctggaacag
ggctacaacacagatgtaggtgaatgtggcgggcagctgtcttctggacagaagcagtgc
atcgccatagccagagctctggttcgagagccacaggtcctaattctggacgaggcaacc
agcggcatggacatcaacacacagcatgcggtgcagggcgtcctggcaggctcagtgggc
ctgacagtgttggtggtggcccaccggctgcagactgtggagaaggcagaccacatcatc
ttcatggagggcggggaggtggttgagcagggcacacaccaggagctcatggctagcaag
gggcgctaccgtcgactcaaagagaaactctttgaggactga
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integrated database retrieval system
