Opisthocomus hoazin (hoatzin): 104328271
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Entry
104328271 CDS
T08436
Symbol
ASCC3
Name
(RefSeq) LOW QUALITY PROTEIN: activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
oha
Opisthocomus hoazin (hoatzin)
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oha03400
]
104328271 (ASCC3)
Enzymes [BR:
oha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
104328271 (ASCC3)
DNA repair and recombination proteins [BR:
oha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
104328271 (ASCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
AAA_19
T2SSE
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
104328271
NCBI-ProteinID:
XP_009931566
LinkDB
All DBs
Position
Unknown
AA seq
1768 aa
AA seq
DB search
MKVAEYEKNHQEREAMEVPRHQIVYVKNVVGQLAFKGMKRLNRIQSIVFETAYNTNENML
ICAPTGAGKTNIAMLTVLHEIRQHVQQGVIKKDEFKIVYVAPMKALAAEMTNYFSKRLEP
LGITVKELTGDMQLSKGEILRTQMLVTTPEKWDVVTRKSVGDVALSQLVKLLILDEVHLL
HEDRGPVLESIVARTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPCIGLFYFDGRF
RPVPLGQTFIGIKTTNKVQQLNHMDEVCYENVLKQIMAGHQVMVFVHARNATVRTAMALR
EKAKNNGHICHFLSPQGSEYGQAEKQVQRSRNKQLRELFPDGFSIHPAHAGMLRQDRSLV
ENLFSNGHIKVLVCTATLAWGVNLPAHAVVIKGTQIYAAKRGSFVDLGILDVMQIFGRAG
RPQFDKFGEGIIITTHDKLSHYLTLLTQQNPIESQFLESLADNLNAEIALGTVTNVEEAV
KWISYTYLYVRMRANPLVYGISHKAYQMDPGLEKHREQLVIEVGRKLDKARMIRFEERTG
FFSSTDLGRTASHYYIKYNTIETFNELFDAHKTEGDILAIVSKAEEFEQIKVREEEIEEL
DTLLNDFCELPAPGGVENNYGKINILLQTYISRGEMDSFSLVSDSAYVAQNAARIVRALF
EIALRKRWPAMTYRLLNLSKVIDKRLWGWVSPLRQFSVLPPSVLSKLEEKNLTIDKMKDM
RKDEIGHMLHHVKIGLKVKQCVHQIPAIIMEATIQPITRTVLRVRLNIAPDFTWNDQVHG
TVGEPWWIWVEDPTNDHIYHSEYFIIQKKQVITKEPQLLVFTIPIFEPLPSQYYIRAVSD
RWLGAEAVCIINFQHLILPERHPPHTELLDLQPLPITALGHREYELLYKFTHFNPIQTQI
FHTLYHTDCNVLLGAPTGSGKTVAAELAIFRVFNKYPTSKAVYIAPLKALVRERIEDWKV
RIEEKLGKKVVELTGDVTPDMRAIAQADLIVTTPEKWDGVSRSWQNRSYVQKVSILIIDE
IHLLGDERGPVLEVIVSRTNFISSHTEKPVRVVGLSTALANARDLADWLNINQMGLFNFR
PSVRPVPLEVHIQGFPGQHYCPRMASMNKPAFQAIRSHSPAKPVLVFVSSRRQTRLTALD
LIAFLATEDDPKQWLKMDEREMNDIIVTVRDSNLKLTLAFGIGMHHAGLHERDRKTVEEL
FVNCKIQVLIATSTLAWGVNFPAHLVIVKGTEYYDGKTRRYVDYPITDVLQMMGRAGRPQ
FDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLEVLADHLNAEIAAGTITSKQDAMDYI
TWTYFFRRLIMNPTYYNLDDVSHDTMNKYLSSLVEKSLFDLECSYCIEIGEDNRSIEPLS
YGRIASYYYLKHPTIGMFKDQLKPESSIEELLLILTNADEYTDLPVRHNEDQMNSELAKH
LPIEVNPHSFDSSHTKTHLLLQAHFSHAMLPCPDYATDTKTVLDQAIRICQAMLDIAAHH
GWLVTALNITGLVQMVVQGRWIHDSSLLTLPNIEPQHLYLFRKWSQGKRKSVHGGYQGPV
ECLPELMAACEGKENVFASIVDSELQTAHISQAWNFLCRLPILNVSLSIKGSWDDPVQPQ
SEVPVPAWPTDARDDRKWIKLHADQEYVLQIHLQRTQMGYQGKQDSKAVAPRFPKVKDEG
WFLILGEVDKKELIALKRTGYVRNRNTVSVAFYTPETPGKCIYTLYLMSDSYLGMDQQYD
IYLNITPASTSAQVTAEMSDAVSRLALK
NT seq
5307 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtagcagaatatgaaaagaatcatcaggagagggaggctatggaagtccccagg
catcaaatagtgtatgtcaagaatgttgttgggcaacttgcttttaaaggcatgaagaga
ctaaaccgaatccaatctatagttttcgagactgcctacaacacaaatgagaacatgcta
atctgtgcccccactggagctgggaagactaacattgccatgctgacagtccttcatgaa
attcgtcagcatgtccagcaaggtgttatcaaaaaggatgagtttaagattgtgtatgtt
gctcctatgaaggctttggcagctgaaatgacaaattacttcagcaagcgtctggaacca
ctaggcattactgtgaaagagttgactggtgatatgcaactgtcaaaaggtgaaattctg
cgaacacagatgcttgtaactactccagagaagtgggatgtagtgacaagaaaaagtgtt
ggtgatgtagccctctctcagctggtaaaactcttgattcttgatgaagttcatctgttg
catgaagacagaggaccagtacttgaaagtatagtagcacgtactttacgtcaggttgaa
tctacacaaagtatgattaggattttgggcctttcagctacattacccaattatcttgat
gttgctacatttcttcacgtcaacccctgcattggactattctactttgatggccgtttc
cgacctgtaccactgggacaaacctttataggaattaagacaaccaataaggtgcagcag
ctgaatcatatggatgaagtatgttacgaaaatgtgctgaaacagataatggctggacac
caggtgatggtgtttgttcatgctagaaatgccacagtacgaactgctatggctcttcga
gaaaaagcaaaaaacaatggtcatatttgtcactttttgtcaccccaaggatcagagtat
ggacaagctgaaaagcaggtgcagagatccagaaataagcagttacgtgagctgtttcca
gatggatttagtattcatcctgcacatgcaggaatgctgcgtcaagacagaagtttggtt
gagaacttgttttctaatggacatatcaaagtcctagtttgtacagctacgctcgcctgg
ggtgtcaatcttcctgctcatgctgttgttattaagggaacacaaatatatgctgcaaaa
agaggctcctttgttgaccttggaattttagatgtcatgcagatatttggtcgagctgga
cggcctcagtttgacaaattcggagaaggcatcattattacaactcatgataaactcagt
cattacctgactcttcttactcagcagaatccaattgaaagccaatttcttgaaagcctt
gcagacaacttaaatgcagagattgctcttggaacagtaactaatgtggaagaagcagta
aagtggataagttatacttatctttatgtacggatgagagcaaatccattagtatatggc
atcagtcacaaagcttatcagatggatccaggtctagaaaagcacagagaacaattggta
attgaagtcggcagaaaactggacaaagctcgcatgattcgctttgaagagcgaactggc
tttttttcatcaacagatttaggcagaactgccagccactactatattaaatacaatact
atagagactttcaatgaattgtttgatgctcataaaacagaaggcgatattcttgctata
gtatcgaaagctgaagaattcgaacaaataaaggtaagagaagaagaaatcgaagagctg
gataccttactgaatgatttctgtgaacttcctgctccaggaggtgtggaaaacaattat
ggaaaaattaatatcctccttcaaacatatattagcagaggggagatggacagcttctcc
cttgtttcagattctgcatatgttgcacagaatgcagctcgtattgttcgagctcttttt
gagattgcccttaggaaacgttggcctgcaatgacatatcgactactgaatctcagcaaa
gtcattgacaagcggctgtggggctgggttagccctttgagacagttctcagtgttgcca
ccatccgtcctctcaaagttggaagagaagaatctcactatagacaagatgaaggacatg
agaaaagatgaaataggtcatatgctgcatcatgtgaagattgggttaaaggtaaaacag
tgtgtccatcaaatccccgccatcataatggaagcaacgattcagccaattacccgcacg
gtcctccgagttcggctaaacatcgctcctgacttcacatggaatgatcaggtacatggc
actgttggagagccctggtggatttgggtggaagaccctactaatgatcacatttatcat
tcagagtacttcatcattcaaaaaaaacaggtcattactaaagaacctcaactgctggtg
ttcacaatcccaatttttgaaccacttccttctcaatattacattcgagctgtgtctgat
agatggttaggagcagaggctgtatgtatcataaattttcaacatttgattcttccagag
agacatccaccccacacagagcttctggatcttcagcctttgcctatcacagccttggga
catcgggaatatgagctcctgtacaaattcacacacttcaaccctatccagacccagata
tttcatacactttatcacacagactgtaacgttcttcttggagcacctacaggttctgga
aaaactgttgcagctgaattagccatctttagagtttttaacaagtatcccacatcaaag
gcagtgtatattgcgcccttaaaagcactcgttcgtgaaagaattgaggactggaaagtt
aggattgaagaaaaacttggtaaaaaggttgtagagctgacaggagatgtgactcctgat
atgagagctattgcccaagctgacctgattgtcactaccccagagaagtgggatggtgtc
agcagaagctggcagaacagaagctatgttcagaaagtttccattcttatcatagatgag
atccatctgctaggggatgagagaggcccagtattggaagtcattgtgtctcgaactaac
ttcatctcgtctcacacagagaagcctgtgagagtagttggtttatccactgctttagca
aatgccagagaccttgctgactggctgaatattaatcagatgggtctgttcaacttccga
ccatcagtacgcccagttcccctggaggtgcacattcagggcttccctggccagcattac
tgtcctcgcatggctagcatgaacaaacctgcatttcaggcaattcggagtcattctccg
gccaagcctgttcttgtttttgtgtcatccagacgtcagacaaggcttactgctttagat
ctgatagctttcctagccactgaggatgatcccaaacaatggctgaagatggatgaaaga
gagatgaatgacattatagtgacagttagagattcaaatctgaagctgacacttgctttt
ggaataggcatgcaccatgcgggtctgcatgaaagagacaggaaaactgtggaagaattg
tttgtgaactgcaaaatccaggttcttattgccacgagcacgttagcttggggtgtgaat
tttccagctcatttagtaattgttaaaggaacagaatactatgatggaaaaacaaggcgt
tacgtggattatcccattacagatgtacttcagatgatgggacgtgctggcagaccacag
tttgatgaccaaggaaaagctgtaattctagtacatgatattaagaaagacttctacaaa
aaattcctttatgagcctttcccggtggaatcaagcttgttagaagtgctagctgaccac
ttgaatgctgaaattgctgctggaactattacttctaagcaggatgcaatggattatatc
acctggacttatttcttccgtcgactgataatgaacccaacttactataacttggatgac
gtgagccacgacactatgaataagtacctctcaagccttgttgagaagtccctctttgat
ttggaatgctcctattgtattgaaattggggaggataatcgcagcattgaacctctgtca
tatggccgcattgcttcctattactacttgaagcatccaactattgggatgttcaaagat
cagttgaaacctgaaagcagcattgaagaattgctcttaattctgacaaatgctgatgag
tacacagatctgcctgtgagacacaatgaagatcagatgaacagtgaactggcaaaacat
cttccaattgaagtcaatccccattcatttgacagttcacacacaaaaacgcacctcctg
ctgcaagcccacttcagtcatgccatgctgccttgtccggattatgcgaccgataccaag
acagtgctggaccaagcaattagaatctgtcaggcgatgctggatattgcagcacatcat
ggctggctggtgactgctctgaatataaccggtctggtgcagatggtggttcagggtcga
tggatacatgactcttccctgcttactttgcccaatatagagccacaacacctttacctt
tttcggaagtggagccaaggcaaaaggaagagtgtgcatggaggttaccaaggacctgtc
gagtgtcttcccgaactaatggctgcctgcgaaggaaaagagaatgtttttgcttccatt
gtggacagtgaattgcaaacagcacacatttcacaggcttggaatttcttgtgccgtttg
ccaatcctaaatgtcagcctgagcattaagggctcttgggatgacccagttcagccacag
agcgaggtgcctgttcctgcttggccaactgacgcgcgagatgacagaaaatggatcaaa
ttacacgctgatcaggagtatgtgctccaaatccatctgcagagaacccagatggggtat
cagggaaagcaagacagtaaagcagtggctcctcgattccccaaagttaaagatgaagga
tggtttttgatattgggagaagttgataaaaaagaactcatcgccctcaagagaactgga
tatgtcagaaatcgaaataccgtttctgttgctttttatactccagaaactcctggaaag
tgtatctacacattgtatctcatgagtgacagttaccttggcatggaccaacagtacgac
atttacctgaacatcacaccagcaagtacctcagcacaagtcacagccgagatgtctgat
gccgtgagtcgcctggctctgaagtga
DBGET
integrated database retrieval system
