Oceanobacillus iheyensis: OB0630
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Entry
OB0630 CDS
T00093
Name
(GenBank) RNA polymerase general stress sigma factor (sigma B)
KO
K03090
RNA polymerase sigma-B factor
Organism
oih
Oceanobacillus iheyensis
Brite
KEGG Orthology (KO) [BR:
oih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oih03021
]
OB0630
Transcription machinery [BR:
oih03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OB0630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_23
HTH_3
GerE
Sigma70_ECF
HTH_28
IF2_N
DUF134
ELMO_ARM
HTH_37
Motif
Other DBs
NCBI-ProteinID:
BAC12586
JAMSTEC:
OB0630
UniProt:
Q8CXL6
LinkDB
All DBs
Position
655820..656611
Genome browser
AA seq
263 aa
AA seq
DB search
MTTKSQPHNKGGDEVYQWIEYLQKDPTNEEIQEKIVLKYQDLVGSIARKYSKNSAIHEDL
VQVGMIGLLAAVRRYDPTYGKSFESFAIPTIIGEIKRFIRDKTWSVHVPRRIKELGPKIR
KGVDELTTDNQKSPTVAEIAKYIGTSEEEVLETMEMGQSYKALSVDRKIEADSDGSTVAI
LDLVGNSEDGYDNVEQRMMLEKILPILSEREQQILECTYFKNMSQKETGELLGISQMHVS
RLQRRSLRKLREAIQSESTEVLD
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccaaatctcaaccacacaataaagggggagatgaggtttaccaatggattgaa
tatctacagaaagatccaactaatgaagaaatacaagagaaaattgtcttgaagtatcaa
gatttagtggggtccatcgcgagaaagtattccaaaaatagtgcgattcatgaagattta
gtacaagttggaatgattggtttgctggcagcggtaagaagatatgatccaacctatggt
aagtcatttgaatcctttgcaataccaacaattattggtgaaattaaacgctttatacgt
gataaaacgtggagtgtacacgtgccacggcgtattaaagaattaggacctaaaattaga
aaaggggtagatgaattaactaccgataaccagaagtcacctacagtggcggaaatagca
aaatatattggaacttcagaagaagaagttttagaaacgatggaaatggggcagagctat
aaagcattatccgttgaccggaaaatagaagctgattctgacggaagtacagtagctatt
ttagatctagtaggtaatagtgaagacggttatgataatgtagaacaacgtatgatgctc
gaaaaaatacttccgatcttgtcagaaagagaacaacaaatattagaatgtacgtatttt
aaaaatatgagtcaaaaggaaacaggagaacttcttggtatatctcaaatgcacgtttct
agactacaacgtcgttctttaagaaagcttagggaagcgattcagtcggagagtacggag
gttttagattga
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integrated database retrieval system
