Oncorhynchus keta (chum salmon): 118374186
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Entry
118374186 CDS
T09424
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118374186
Ion channels [BR:
oke04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
118374186
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQ
FixH
Motif
Other DBs
NCBI-GeneID:
118374186
NCBI-ProteinID:
XP_052355219
LinkDB
All DBs
Position
37:15976959..16019533
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AA seq
2040 aa
AA seq
DB search
MAQLLVPPGPDSFCHFCPDSLAAIERRVAEEETGRPRVDRCSDSDDNGPKPNSDLEAGKS
LPFIYGDVPQGFVSTPLEDLDPFYSNQKTFIVLNRGKAIFRFNATPACYILSPFNPLRRI
AIAVLVHSLFSMLIMFTILTNCAFMTLSNPPDWAKNVEYTFTGIYTFESLIKILARGFCV
GKFTFLRDPWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCIRNLVNDTIPDNHLNRTLGTPNI
NGTDFNGTDFNVTRSVNWTEYINDESNYYYLLNRRDALLCGNGSGAGLCPEGFTCIKAGR
NPDYDYTSFDSFGWAFLSLFRLMTQDFWENLYQQTLRAAGKPYMMFFVLVIFLGSFYLVN
LILAVVAMAYDEQNQATIEEAAQKEEEFQAMLEQLKRQQEEALVAAAATTESHGEYSGRG
GPSSEASSGTSKLSSKSAKERMNRQKKRKERGEHEKFHKSESEDSIKRLSFRFSIDANRL
SYEKRCSSPNQSLLSIRGSLFSPRRNSRASLFSFRGRARDVVSDNDFADDEQSTFEDTDS
RRGSLFVPCRVERRSSTVSQTSLAPQRVLLPANGKMHCTVDCNGVVSLVGGTSVPTSPVG
LLLPEMFLCLQGTTTDSEMRLKKRRSRQASMAYLDEPARARAMSVASILTNTMEELEESR
QKCPPCWYKFANTYLIWDCCPMWLSFKGIVNTVVMDPFVDLAITVCIVLNTLFMAMEHYP
MTTEFNHVLSVGNLVFTGIFTAEMCFKLIALDPYYYFQQGWNIFDGIIVSLSLMELGLAN
VEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQL
FGKSYKECVCKIADNCQLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCLIV
FMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDSEMNNLQIAVGRIQRGVAWVKVTIR
QVIQSLFLGGGATKGVKEGSLEEGKPLDELHSSINGKGGNCISNHTLVEISKDPSGVYLK
EGNGRSGGRLGVGLGDSTENYPKEECNYMSFIHNPSLTVSVPIAVCESDFETAITEDFSS
DSASEEMSMGSKEKLPVESRQPTSSEGSSVDIGPPGDGAESVELEDEESEDPENCFTDGC
VLRFQCCQVNVEQGKWKMWWTLRKTCFIIVEHNWFETLIIFMILLSSGALAFEDIYIEQR
KTIKVVLEYADKVFTYIFILEMLLKWVAYGFKKYFTNAWCWLDFLIVDVSLVSLVANALG
YSELSAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMG
VNLFAGKYYHCVNTTNDETFPIEVVNNKSDCLALANDSARWKNVKINFDNVGAGYLALLQ
VATFKGWMDIMYAAVDSRNVELQPQYEQNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFN
QQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPTNAFQGCVFDFVTKQAFDIVI
MILICLNMVTMMVEEDDQTPEREKILHWINFVFIVLFTGECTLKMISLRHYYFTIGWNVF
DFVVVILSIVGMFLSELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSL
PALFNIGLLLFLVMFIYAIFGMSNFAYVKHEAGIDDMFNFETFGNSMLCLFQITTSAGWD
GLLAPILNKKEPDCDSQMEHPGTLYRGNCGNPPVAMFFFVSYIIICFLIVVNMYIAVILE
NFSVATEESAEPLSEDDFEMFYEVWERFDPDATQFVEYDKLSDFADALDPPLRMAKPNHI
QLIKMDLPMVSGERIHCLDILFAFTKRVLGEGEGLDLLRGQMEERFMASNPSKVSYEPIT
STLRRKQEDMSAVVIQRSFRRYLARLALKKAAELYKEQPKGSVMCELEDKEVLVIGKFAD
NSTSTEKMDMTSSTASLPSYNSATKSEKDKYEKEQREKEDREKDLREQNKQVNKRRNDEY
NT seq
6123 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtaccgcccggacctgacagcttctgccacttctgtcccgactcg
cttgccgccatcgaaaggcgcgtcgccgaggaggagaccgggagaccccgcgttgaccgc
tgtagcgacagcgatgacaacgggcccaagcccaacagcgacctggaggcagggaagtcc
ctccccttcatctacggtgatgtcccccaaggctttgtctccacccctctggaggacctg
gaccccttctactccaatcagaagacatttatagtgttgaatcgcggcaaggcaatattc
cgtttcaacgccactcctgcctgttacatcctaagccccttcaatcctctacggagaata
gcaattgcagttttagtacactcgttgttcagcatgttaatcatgttcaccattttgacc
aactgtgcttttatgactctgagcaaccccccggactgggccaagaatgttgagtacacg
ttcacagggatttacacattcgagtctctcattaaaatcttggcgagggggttctgtgtg
gggaagttcaccttcctcagggatccatggaactggttggacttcatggtaatctccatg
gcatatgtgacagagtttgtggacctgggtaatgtctcggccctcagaaccttcagggtt
ctccgagccctcaaaactatatcagtcatcccaggactaaagaccatcgtgggcgctctg
atccagtcggtcaagaagctctccgacgtcatgatcctcaccgttttctgtctcagcgtc
ttcgccctgattggcctgcagctcttcatgggaaacctgaggcagaagtgtatccgcaac
ctcgtcaatgacacgatccccgacaaccacctgaacagaactctgggaactccaaacata
aatggaactgatttcaatggcactgatttcaacgtcactcgctccgtaaactggactgag
tacatcaacgatgagagtaattactattacctcctcaaccgcagggacgccctgctctgt
gggaatggcagtggagccgggctgtgcccagagggattcacatgcattaaggcaggcagg
aacccagactacgactacacaagctttgactcgtttggctgggccttcctgtccctgttc
agactcatgacccaggacttctgggaaaacctctaccaacagaccctgcgagcggcgggg
aagccctacatgatgttctttgtgttggtgatcttcctgggttccttctacctggtgaac
ctgatcctggctgtggtggccatggcctacgacgagcagaaccaggccaccatagaggag
gcagcccagaaggaggaggagttccaggccatgctggagcagctcaagagacaacaggag
gaggcattggttgccgcggcagcaaccacagagagccacggagagtacagcgggagaggg
gggccctcctcagaagcctcctcagggacctccaaactcagctccaagagcgccaaggag
agaatgaaccgtcagaagaagagaaaagagaggggcgagcacgagaagttccacaagtcc
gagtcagaggacagtatcaagaggttaagcttccggttttcgatagatgccaaccggctg
tcctacgagaagagatgctcctcacccaaccagtctctcctcagtatccgcggctccctc
ttctccccgaggaggaacagccgagctagcctgtttagcttccgaggccgcgcccgcgat
gtggtctccgataacgacttcgccgacgacgagcaaagcacgttcgaggacaccgacagc
cgccgcggctccctgttcgtgccttgccgtgtcgagcgccgctccagcacggtcagtcag
actagcctggcccctcagcgcgttctgctgcccgccaacggcaagatgcactgcaccgtg
gactgtaacggcgtcgtctcgctagtgggagggacctcggtgcccacctcgcctgtagga
ctgctcctgcctgagatgtttctttgtctccaggggacgaccactgactctgagatgagg
ctgaagaagaggaggtctcgccaggcttccatggcctacctagatgagccagccagagcc
agagctatgagtgtggccagtattctcaccaacaccatggaggagcttgaagagtccagg
cagaagtgtccaccatgctggtataagtttgctaacacctatctgatctgggactgctgt
cctatgtggttgagcttcaaggggatcgtcaacacggtggtgatggacccctttgtggac
ctggccatcaccgtctgcatcgtcctcaacaccctgttcatggccatggaacattatccc
atgaccacggagttcaaccacgtcctctctgtcgggaacttggtgtttacaggcatcttc
acggctgagatgtgtttcaagctaatcgctctggatccctactactactttcaacagggg
tggaacatatttgacggcatcattgtcagtctgagtctgatggagctcggcctggccaat
gtggagggcctgtctgtgctccggtctttccgattgttgagggtgttcaaactggccaag
tcttggcccaccctgaacatgctgatcaagatcatcggtaactcggtgggagctctgggt
aacttgacactggtcctagccatcatcgtgttcatcttcgccgtggtgggcatgcagctg
ttcggcaagagctacaaggagtgtgtgtgtaagatcgcagacaactgccagctgccccgc
tggcacatgcacgacttcttccactcgttcctcatcgtgttccgggtgctgtgtggggag
tggatcgagaccatgtgggactgtatggaggtggctggccagagcatgtgcctcatcgtc
tttatgatggtcatggttatagggaacctggtggtcctgaatctgttcctggccctgctg
ctcagctcctttagcgccgacaacctggcggccacagacgacgacagcgagatgaacaac
ctgcagatcgctgtgggccgcatccagaggggcgtggcctgggtcaaggtgaccatccga
caggtcattcagagcctgttcctcgggggaggagccaccaaaggggtcaaggaggggtca
ctggaggagggcaagcccctggacgagctccacagctccatcaacggcaaggggggcaac
tgcatctcaaatcacacgttggtcgagatcagtaaagatccgagtggggtctatctgaag
gaggggaacgggcggtccggaggtcggttgggggtggggctaggagatagtacggagaat
tacccgaaggaggagtgcaactacatgtcgttcatccacaaccccagcctgacggtgagt
gttcccatcgcggtgtgcgagtcagactttgagaccgctatcacggaggacttcagcagc
gactcggcctccgaggaaatgtcgatgggcagcaaagagaagctacctgtagagtcccgg
caacctacctcgtcggagggcagctcagtggatatcgggcccccgggggatggagctgag
tcagtcgagctggaggacgaggagtcagaggacccagagaactgtttcactgatggctgt
gtgctcaggttccagtgttgccaggtcaacgttgagcagggcaagtggaagatgtggtgg
accttgaggaagacgtgtttcatcatcgtggaacacaactggttcgagaccttaatcatt
ttcatgatcctgctcagcagtggagctctggcgtttgaagacatttacatagagcagagg
aagaccattaaggtagtgctggagtacgcagacaaagtcttcacttatatcttcatcctg
gagatgctgctgaagtgggtggcctacggattcaagaagtacttcaccaacgcctggtgt
tggctggacttcctcattgttgatgtgtctctggtgagcttggtagccaatgcgttaggc
tactctgagctgagtgccatcaagtccctacgaacactgcgggccttaagacccctgagg
gccttgtcacggttcgagggcatgagggtggtggtgaacgccctcctgggtgccattccg
tccatcatgaacgtgctactggtgtgcctcatcttctggctcatcttcagcatcatgggc
gtcaatctgttcgcagggaagtactatcactgtgtcaacaccaccaacgacgagaccttt
cccatcgaggtggtcaacaacaagagcgactgtctggccctggccaatgacagcgcccga
tggaagaatgtcaagatcaactttgataatgtcggggccggttacttggccttgttgcaa
gtggcaacgttcaaaggttggatggacatcatgtacgcagctgtggactctcgtaatgtg
gagcttcagccccaatatgaacagaacctctacatgtatctgtactttgtcatcttcatc
atctttggctccttcttcactctcaacctcttcattggtgtcatcattgacaacttcaac
caacagaagaaaaagtttggaggtcaggacatcttcatgacagaggaacagaagaagtac
tacaatgccatgaagaagctcggctccaagaagccccagaagcctattcccaggccaacg
aatgcattccaaggctgtgtgtttgacttcgtaacgaagcaggcttttgacattgtcatc
atgatcctcatctgcctcaacatggtcactatgatggtggaagaggatgaccagacacca
gagagggaaaaaatcctccactggattaactttgtctttatagtgctcttcactggggag
tgtacgctcaaaatgatatccctccgccattactacttcaccattggctggaacgtgttt
gactttgtcgttgtcatcctttcaatcgtaggtatgtttttatcagaattgattgagaag
tactttgtttccccaacgttattccgagtcatccgacttgccagaatcggccgcatcctc
cgtctcatcaagggcgccaagggcatccggacgcttttgttcgccttgatgatgtcactt
cctgccctgtttaacattggcctcctgctcttcctggtcatgttcatctacgccatcttc
ggcatgtccaacttcgcctacgtcaagcacgaggcaggaatcgacgacatgttcaacttc
gagacgttcggcaacagcatgctctgcctgttccagatcaccacgtcggcgggctgggac
ggcctcctggcgcccatcctcaacaagaaggagcccgactgtgacagccagatggagcac
ccgggcaccttgtaccggggaaactgcggcaacccgccagtggccatgttctttttcgtc
agctacatcatcatctgtttcctcatcgtggtcaacatgtacatcgccgtcatcctggag
aacttcagcgtggccaccgaggagtcggccgagccgctgagcgaggacgactttgagatg
ttctacgaggtgtgggagcgcttcgacccggacgccactcagttcgtggagtacgacaag
ctgtcggactttgcagacgctttggacccaccgctgcgaatggccaagcccaaccacatc
cagctgatcaaaatggatctgcccatggtcagcggggagcgcatccactgccttgacatc
ctgtttgccttcaccaagcgtgtcctgggagagggtgaaggcttggacctcctccggggc
cagatggaggagcgcttcatggcctccaacccctccaaagtctcctacgaacccatcacc
agtaccttgcggcgtaagcaggaagacatgtctgccgtggtgatccagaggtcctttagg
cgctacctggcccgactcgccctgaagaaagcagcagagctctacaaggagcagcctaaa
ggcagcgtgatgtgcgagctggaggacaaggaggtgctggtgatagggaagtttgcggac
aactccacctccacagagaaaatggacatgacgtcctccaccgcctcgctgccttcgtac
aacagtgccacaaagtcggaaaaggacaaatatgagaaagaacagagggagaaagaggac
agagagaaagatctaagagagcaaaataaacaagtgaacaagaggagaaatgatgagtac
tga
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