Oncorhynchus keta (chum salmon): 118377028
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Entry
118377028 CDS
T09424
Name
(RefSeq) RNA-binding motif protein, X chromosome-like isoform X1
KO
K12885
heterogeneous nuclear ribonucleoprotein G
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118377028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oke03041
]
118377028
Spliceosome [BR:
oke03041
]
Common components
Common spliceosomal components
hnRNP proteins
118377028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM1CTR
RRM_7
Nup35_RRM_2
PHM7_cyt
RRM_5
RRM_occluded
RBD_DEAH11
DUF7373
Motif
Other DBs
NCBI-GeneID:
118377028
NCBI-ProteinID:
XP_035619738
LinkDB
All DBs
Position
4:complement(50642470..50648218)
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AA seq
385 aa
AA seq
DB search
MAEADRPGKLFIGGLDTETNEKALEKYFSKYGRIVEVLLMKDRETNKSRGFAFVTFESPA
DAKDAAREMNGKSLDGKPIKVEQATKPQFESAGRRGPPPMRGRGPPRGPRGSRGAPMRGP
PSRDYYDNVGIVEPFFKGISSRGPPPLKRGPPIRNGGPPPKRHAPSPMGRPSMSRDRDPY
GPPPPRRDSMSRRDDYPSPRDEYYSTKDSYSSREYVSSRDTRDYAPTPRDYPPRDYPQSS
SRDEYGSMSRGYSDGYGGGREPKSYMERPSAASYREPYDGYGNSRSAPPSRGPQPSYNGS
GGSSRYDDYGSSSRDGYGSRESYPSSRSEPYPPSRGERMGKQERGPAPPIERGYPREAYS
GSSRGAPRGGRGGSRVDRGIARSRY
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggctgaccgaccagggaagctcttcatcggtggcctggacactgaaactaac
gagaaggcccttgagaagtacttcagcaaatatggcagaatagtagaagttctgttgatg
aaagaccgtgaaacgaacaaatcaagaggttttgcttttgtgacctttgagagtccggca
gatgcaaaggatgctgcgcgcgaaatgaatgggaagtcacttgatggtaagccaataaag
gttgaacaagcaacaaaacctcagtttgagtcagcaggcagacgcggcccaccccccatg
cgtggccgcggtccccctagaggtcctagaggatctagaggagcaccaatgaggggtcca
ccatccagagactactatgataacgtagggattgtagaaccctttttcaaagggatttcg
tccagaggccctccaccactgaaaaggggacctccgattcgtaatggaggccccccaccc
aagagacatgctccttctccaatgggcagaccttccatgtctagggacagggacccctat
ggcccaccccctcctcgcagggactcaatgtccagaagggatgattacccatcaccaaga
gatgaatattacagcacaaaggacagctattctagccgggaatatgtgagttccagggat
acacgggactacgcaccaacgccacgggactatccaccaagggattatccccaatccagt
tcccgtgatgaatatgggtcaatgtcaaggggctacagtgatggttatggtggaggccgg
gaacccaaaagctatatggagcgccctagtgcagcctcttatcgagagccctacgatggt
tacggtaactcacgcagcgccccaccctcaaggggcccccaaccatcctacaatggcagt
ggcggaagcagtcgctatgacgactatggaagcagttcccgggatggatatggcagtcgt
gaaagttaccccagcagtcggagtgaaccataccctcctagccgtggtgagcgaatgggc
aaacaggagcgggggccagcacccccaatcgagagaggctatccccgtgaagcgtacagt
ggctcaagtcgcggggcgccccgtggtggccgcggaggcagcagagtcgatagaggaatt
gcccgcagcagatactga
DBGET
integrated database retrieval system
