Oncorhynchus keta (chum salmon): 118378198
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Entry
118378198 CDS
T09424
Symbol
ptchd1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oke04990
]
118378198 (ptchd1)
Domain-containing proteins not elsewhere classified [BR:
oke04990
]
Other domain-containing proteins
Patched domain-containing proteins
118378198 (ptchd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Mucin
Zip
Motif
Other DBs
NCBI-GeneID:
118378198
NCBI-ProteinID:
XP_052369297
LinkDB
All DBs
Position
Unknown
AA seq
1006 aa
AA seq
DB search
MVGVPAVSSRWWERLKTLCPERARRMLRQVLQAGLRSSFQALGRFVASHPVFFASAPVLV
SVLLGASFSRYRVEGNVESLLVPKHSLAKIEGNLVDSLFPVNRSKHTLYSDLQTPGRYGR
VIVTSRRGSILDPLHTDLVLKLHRAVVQLQVPVLGFNYSFSHLCLLDDKNTCIIDDIIRA
LEDSQSARFANRSSLPLRYPITRLADGRMAYIGHQLGGVQAWGAGPAVQGPGGVSGRGQG
VRSARALQLTYYLQARGALTDRVASQWEQAFCGELGRFGAGHPELSLYPFTSSSLRTDFQ
ASSVLARRPLLASVCLCLVLAVGCCSMRDCVRAKPWLGLLALLSIALSGLTAAGILNLTG
TTYNSTYLGVPFILLGHGLFGTFEMLSSWRRTREDQHVKERVASVFSDVMLRYSGATLLH
QVSLGLAASPLTNLEAVRLFCRCAALGVTVGYLYTLSFYATCLVATGYLETGYRHGCFCR
RVPKKGALDTKPRWYRCLMYTRYQDETHSQTHSHTPNSTHTHTPNAAHTYTHTANPAHSH
THTHTPNTTHTHDHTPNTTHAHTHTPNTTHIHAHTHIPNTHTPTTISELRPQDSHLLLGC
VQRCYGDWITNTYVKPFMVLLYLVYISFGLMGFLQVSQGSEPSSLVAMDTGTLLYARAQQ
RYFSSYSPVIGFYVYESAPYWNTSVQRDLLEYAKGFQRISWLESYLDYLTERNLSTTSQS
RESFTRMLRLSFLRQPQFAHFADDIIFAERDEGEEPEMAASRVFLVAKTTENKREEMSVL
LDTLRRLSLTSRVRFLIFNPSFVYLDRYATAVSSPLRHSLMAVLFLLGLSSLAVVEPLVA
VWLSLTLLSVQFGVLGFMTLWGVELDCVSVLCLISALGHSADCCGPLLATFSSGRGDSRT
VWVRLALERHGVPSLQTLICYTAALLPLAAVRSNLTRSLFRCLVLTAFCSALHALAFLPT
LLTFLPPAKKTGSRQGDRGEGEGLREEVECVEMVDSTRVVDQITTV
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggtcggcgtgcccgctgtttcctctcgctggtgggagaggctcaagacgttgtgtcca
gagcgcgctaggaggatgctgcgccaggtgttgcaggcaggcctgaggagctctttccag
gctctgggtcggttcgtggcgagccacccagtcttcttcgcctccgccccagtactggtg
tctgtcctgctgggggccagcttcagtcggtatagagtggaaggtaacgtggagtccctc
ctggttcctaaacacagtctggcaaagatagaaggaaacctggtggactcattgtttcct
gtcaacagatctaaacacaccctgtactctgacctgcagactccaggtcgttacggtcgt
gttatagtcacctctaggagaggcagcatcctggaccctctacacacagacctagtactc
aagctccaccgtgctgtcgttcagctccaggttccagtgttggggttcaactactctttc
tcccacctctgtcttctcgacgacaagaatacctgcatcatcgatgacatcatccgagcc
ctggaggacagccaatcagctcgcttcgctaaccgttcttcacttcctctacgctaccca
atcacacgtttggctgacgggcggatggcctacattggtcaccagttaggaggggtgcag
gcgtggggggcggggcctgcagtacagggtcctgggggtgtgtctggtcgaggccaggga
gtccggagcgctagggctctgcagctgacctactacctgcaggctcgcggcgccctgaca
gacagggtggctagccaatgggagcaggcgttctgtggcgagctgggccggtttggggcg
ggacaccctgaactgagcttataccccttcacttcatcctctctaaggacagacttccag
gcgtcgtcagtgctggctcggcgccccctgctggccagtgtatgtttgtgtttggtgtta
gccgtgggctgttgttctatgagggactgtgtgagagctaaaccctggctggggcttttg
gctctgctgtctatcgccctctctggtctcactgctgctggcatccttaacctgactgga
accacttacaactcaacctacctgggggtaccattcatactgctgggtcatggactgttt
ggcacatttgagatgctatcgtcatggagaaggacacgtgaggaccaacatgttaaggag
cgtgtagctagcgtattctctgatgtcatgctgcgttactcaggagctacactgctacat
caggtgtctctgggtctggctgcgtctcctctgaccaacctggaggctgtccggctgttc
tgtcgctgcgctgcattgggcgtaaccgttggttacctttacaccttgtccttctacgcc
acctgtctggttgccacaggttacctggagacagggtacagacacgggtgtttctgtcgc
cgcgtccccaagaagggagcgctggacaccaagccacgctggtaccgctgtctcatgtac
acacgctaccaggacgagacacactcacaaactcactcacacactcccaactctacacac
acacacacacctaatgctgcgcacacctacacacatacagcaaatcctgcacactcacac
actcacacacacactcccaacaccacacacacacatgaccatacacctaacactacacac
gctcacacacacactcccaacactacacacatacatgctcacacacacattccaaataca
cacaccccaaccaccatctctgaactgcgaccccaggactcacacttgttgctaggctgc
gtgcagcgttgctatggagactggatcaccaacacctatgtgaagcccttcatggttctg
ctctacctcgtatacatctcctttggcctgatgggcttcctacaggtgagccagggctcg
gagcccagttctctggttgctatggatacggggacgttgttgtatgctcgcgcccagcag
cgctacttctcctcctactctcctgtgattggcttctatgtctatgagagcgccccctat
tggaacacctcggtacagcgagacctgctggagtacgctaaagggttccagcgaatcagc
tggctggaaagctacctggattacctgacagaacggaacctctccactaccagccaatca
cgtgaaagctttacgcggatgctccgcctctccttccttcgccagccgcaattcgctcat
tttgccgatgacatcatcttcgctgagcgcgatgaaggggaggagccagagatggcagcg
tcacgtgtcttcctggttgccaagacaacagagaacaagagggaggagatgtccgtccta
ttggacacactgagacgtctgtctctgacatcacgcgtccgctttctcatcttcaacccc
tccttcgtctacctggacaggtatgctacagcggtgagctctcctctgcgccactccctg
atggcggtgttgttcctgctgggtctgtcatctctagcggtggtggagcccctagtggca
gtgtggctcagtctaaccctcctctctgtccagtttggtgttctgggcttcatgactctg
tggggcgtggagctcgactgcgtgtctgtgttatgtctgatttcagcactgggtcactct
gcagactgttgtggtcctctactggccaccttctcctctggccgtggtgacagccggacc
gtgtgggtcagactggcgttggagagacatggcgtcccctctctacagacgttgatctgc
tacactgcagcgctgctccctctggccgccgtccgctccaaccttacacgctcgctgttc
cgttgcctagtgctgacggcattctgttcagcgctccatgccttggccttcctgcccacg
ctgctcaccttcctgccacccgccaagaagacaggaagtagacagggagacagaggggaa
ggggaggggcttagagaggaagtggagtgtgtggagatggttgacagcaccagggtggtc
gaccagatcaccaccgtctga
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