Oncorhynchus keta (chum salmon): 118384600
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Entry
118384600 CDS
T09424
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA1-like isoform X1
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
118384600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118384600
Membrane trafficking [BR:
oke04131
]
Endosome - Golgi transport
Others
GGA
118384600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VHS
GAT
Alpha_adaptinC2
GGA_N-GAT
Hrs_helical
PCRF
Elf4
Motif
Other DBs
NCBI-GeneID:
118384600
NCBI-ProteinID:
XP_052374828
LinkDB
All DBs
Position
5:complement(17175835..17184289)
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AA seq
690 aa
AA seq
DB search
MLQCQLPSCPSSTHHCRGGEKGCSQSCSSRDKFMVKRIPIVMAAPPDTDSLEARINKATN
PLNRDTDWDGIQAFCDQLNNDLEGPQLATRLLSHKIQSPQEWEAMQALVVLETCMKSCGE
RFHSEVGKFRFLNELIKVVSPKYLGSRAPEPVKKKVLELIYSWTLGLPDEAKIADAYQML
KKQGIVKQDPVLPADKLLLLPPPRPKNAIFEDEEKSKTLTRLLNSTQPEDLKAANKLIQQ
MVQEDQKRAEKLSKRVNAIQDVNESVSLLTQLLEDYDRTTNPQSNAELIQDLYQRCEKMR
PTLFRLASDTEDNDEALAEILQANDSLTQVINLYRQQVKGEVVNGNNSANTQRLTGGSVA
LLDLSGLDTSPPSPEFSTPTDSLNAPSQEMGIRLLDDELMSLGLSEGTPHTPNPASQPED
STTWDSFQSSDSVDITDIPAAPSVLLSPDPLPYTQPLSTGATSGSSALDELDLLGKKLLQ
QSLPPEGLQVKWDKPPFKPTLRDLQNKSGSNPSPIPAFSPEHPVALQGDRLLDTSPVHTV
IPPIEMTLTDIFVPLESIKPSSLLPVTVFDSHSLRVLFHFARDTPSSLADVLVVIISMLS
SAPVPVSNILFQPSVPDTMRVKLQPPSGTELPAFNPILPPAAITQILLLANPHKEKVQLQ
YKLTFTLGEEDHDERGVVAQFPPSDTWGNL
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgctccagtgccagctgccatcgtgtccatcatccacccatcactgtcggggaggtgag
aaagggtgctctcaaagttgttcctcgcgagacaagttcatggtaaagagaattcccata
gtgatggcggcgccgcctgacacggacagtttggaggcacgtatcaacaaggccacaaac
ccactgaacagagacacagattgggacggcatccaggccttctgtgaccagctcaacaat
gatttggagggaccccagctggccaccaggctactgtctcacaagatccaatctcctcag
gagtgggaggccatgcaggcacttgtggtgctggagacgtgcatgaagagctgtggggaa
aggttccacagtgaggtgggcaagtttcgcttcctcaacgagctcatcaaagtggtctct
ccaaagtacctcggcagccgggctccagagccagtgaagaagaaggtgttggagctcatc
tatagttggacactggggctgcctgacgaggcaaagatcgctgatgcctaccagatgctt
aaaaaacagggcattgtcaaacaggacccagttcttccagctgacaaactcctcctgctt
ccacctcccagaccaaaaaatgccatatttgaggatgaggagaagtcaaagacactgact
cgcctgttgaacagcactcaacctgaggacctgaaagcagccaacaaactgatccagcaa
atggtgcaggaggaccagaagcgggcggagaagttgtccaagcgtgtgaacgccatccag
gatgtgaatgagagtgtcagcctactgactcagctgctggaggactatgaccggaccacc
aacccacagagcaatgcagagctcatccaggacttgtaccagcgctgtgagaagatgaga
cccacattgttcagactggccagtgatacagaggacaatgatgaggctctggcggagatc
ctccaggccaatgacagcctgactcaggtcatcaacctgtacaggcagcaggtgaaggga
gaggtggtgaacgggaacaactcagctaatacacaaaggctcacaggaggtagtgtggca
ctacttgatctatcgggattggatacgtcacctccatcaccagaattctccactccaaca
gacagcctaaatgctccctcccaggagatgggcatccgtctccttgatgatgagctaatg
tcactgggtttgagtgaggggaccccccacacacccaacccggcctcccagcctgaggac
tctaccacctgggactctttccagtcttccgacagtgtggatattactgatatcccagca
gcgcctagtgtactactgagtccagatccgctcccctacacccagcctctttctactgga
gccacgtctggaagctcagccttagatgagttggatctgctggggaagaagctgctacag
cagtccctacctccagagggcctgcaggtcaaatgggacaagcctccgttcaaacctact
ctacgagatctccagaacaaatctggaagtaatccaagtcctatcccggccttctcccct
gagcacccggtggctctccaaggtgataggttgttggacacctctccggttcacacagtc
attccccctatagaaatgaccctgacagatatttttgtgccgcttgagtccattaagccc
agcagcctgttgcctgtgacggtgtttgatagccacagtttgcgggtgctcttccacttt
gcacgtgacactccgtcctctcttgctgatgtgctggtggtgatcatctccatgctctct
tccgccccggttccagtcagcaacatcctctttcagccctctgtccctgacacaatgaga
gtgaagctacagcccccatcaggaacagagcttccagccttcaacccaatcctcccacct
gctgccatcacacagatcctgctgctggccaaccctcacaaggagaaggtgcagttgcaa
tacaagctaaccttcacgctaggagaggaagaccatgatgaaagaggagttgtagcacag
tttccaccttcagacacatggggcaatctttaa
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