Oncorhynchus keta (chum salmon): 118386723
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Entry
118386723 CDS
T09424
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-2-like
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04080
Neuroactive ligand-receptor interaction
oke04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118386723
04082 Neuroactive ligand signaling
118386723
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118386723
Ion channels [BR:
oke04040
]
Ligand-gated channels
GABA-A
118386723
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
118386723
NCBI-ProteinID:
XP_035630369
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Position
8:complement(4800162..4838822)
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AA seq
480 aa
AA seq
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MPYIKFLFLLFCLILIGECRKHKSRKRRWSGAVESYKHGAPLTGKRMVDNTKSRKLKTDN
LLRVDDHDFTMRPAFAGPAVPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPS
TTNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTENIMLRVFPDGHVLYSLRVTVTAA
CNMDFSRFPLDSQTCTLELESYAYTDEDLMLYWKSGDESLSTDDRISLSQFLIQKFHTTS
RLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLG
ITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTLRDGKDR
KLREKAREQSLGLAREQSLPCTCGMSHTGTMMADGTYSESDTNSLAGYTRAPAPEDPPEK
QERMVVHISLDNESTAATKKKTGFRSFSFMQNTHAIDTYSRMIFPGSYIIFNLIYWSVYC
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgccttatattaagtttttgttcttacttttttgcttgatacttatcggggaatgcaga
aagcacaaaagtaggaaaaggcggtggtccggggcggtggaatcttacaagcatggcgct
cccctgactggaaaaaggatggttgataacaccaaatctcgcaaattgaagacagacaac
ctgctgcgagtggatgaccatgatttcaccatgagaccagcctttgcaggccctgctgtc
cctgtaggggtggatgttcaggtggagagtttggacagtatatcagaggtggacatggac
ttcaccatgaccctgtatctgaggcactactggaaagatgagaggctgtcctttcccagc
acaaccaataagagcatgacgttcgacgggcgcctggtcaagaagatctgggtgcctgat
gtgttcttcgtccactccaagaggtcgttcattcatgacaccaccactgagaacatcatg
ctcagggtgttcccagacggacacgtgctctacagcctcagggtgacggttactgctgcc
tgtaacatggacttcagtcgtttccctctggattcacagacctgcaccttagagctggag
agctatgcttacacggacgaggacctcatgctgtattggaagagtggggatgagtccctg
agcacggatgacagaatctccctgtctcagttcctcatccagaagtttcacactacctcc
agactggctttctacagcagcacaggctggtacaaccgtctgtacatcaacttcaccctg
cgacgccacatcttcttcttcctgctccagacctacttccctgcaactctgatggtcatg
ttgtcctgggtgtcgttttggatcgaccgccgggccgtcccggccagggtctcattaggt
atcaccacggtgctcaccatgtccaccatcatcactggagtcaacgcctccatgcccagg
gtttcctacatcaaagctgtggacatttacctctgggtcagttttgtgtttgtgttccta
tcggtgctggagtatgctgccgtcaactatctgacaacgttgagggacgggaaagatcgg
aagctcagggaaaaggccagagaacagtccctgggcctggcgagagaacagtcgctcccc
tgcacatgtggcatgtcccacaccgggaccatgatggcggacgggacctacagcgagtcc
gacaccaacagtctagccgggtacaccagggccccagctcctgaggaccccccggagaag
caggaacgcatggtagtgcacatctccttagacaacgagtccacggcggcaaccaagaag
aagacgggcttccgcagcttcagtttcatgcagaacacccacgccattgacacctactcc
cgcatgatctttcctggatcctacatcattttcaacctcatctattggtctgtgtactgc
tga
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