Oncorhynchus keta (chum salmon): 118395868
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Entry
118395868 CDS
T09424
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
118395868
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118395868
Ion channels [BR:
oke04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
118395868
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DUF2894
DUF6987
Motif
Other DBs
NCBI-GeneID:
118395868
NCBI-ProteinID:
XP_035645768
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Position
17:complement(42005076..42027950)
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AA seq
859 aa
AA seq
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MPKQQQQNRDLELDRLVRQVPLQHHPPTRSPSPSSPNRTLELPNVPSYPRLPPISLSRQL
SGLFNPTFHIEDDPTSALPSVSSRLSVHPAVSVEDVDSGGEGGGGGGEHHHHHIPQILTL
QDPNFKTLTVPGVSKTSRQCKVAEKDEKKPKNIWTNIKKLYSQSEEDEEEMEIAVRAWPS
QSSILSGDDGLKERPASSASQASYVVNERLQELVKMFKERTERAKEKLIDPDHSDDDSPT
ASPARAPTPPPAPPEEPKEEEIKEQQPKPTLCCKVMPPRWIRALLHYRFPASIDPFTNLV
YVLWLFFVTLAWNWNMWLIPVRWAFPYQTPSNIYLWLLTDYLCDLIYILDILVFQPRLQF
VRSGDIVFDKKDMRVNYMKTFRFKMDVISLVPLELLYFKTGINPLLRFPRLLKIMSFFEF
NDRLEGILTKAYVYRVIRTTTYLLYCLHCNACLYYWGSAYEGLGSTQWVYDGQGNSYIRC
YYFAVKTLITIGGLPDPTTLFEIIFQLINYFVGVFAFSIMIGQMRDVVGAATAGQTYYRA
CMDNTVNYMASYRIPKDVQNRVKTWYNYTWQSQGMLDEQELLVQLPDKMRLDIAVDVNYD
IVSKVSLFQGCDRQMIFDMLKRLRSVVYLPGDYVCKKGEVGREMYIIKAGEVQVVGGPDG
KTVFVTLRAGSVFGEISLLAVGGGNRRTANVVAHGFANLFILDKKDLNEILVHYPESQKL
LRKKARKMLTKDKKPPKEPAQVIPPRTVTPKLFKAALDVAHQKTGLKGTLGKIKEKINKS
SVSLQPSMSSSLPPLSPVSPVSSLDPERKADATSPTLDSSTLLCPVSHCHGDETLSKEQG
QVEGEVAGESGKKKEKRKA
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcagcagcagcaaaaccgggacctggagttggaccgcctggtccgccaggtc
cctctccaacaccaccctccgactcgcagcccctcaccgtcctcccccaacaggacccta
gagctgcccaacgtgccctcctacccccgcctgccacccattagcctgtccaggcaactg
tcagggcttttcaaccccaccttccacattgaggacgaccccacgtccgctctaccctca
gtgagctccaggctcagtgtgcacccagctgtcagtgtggaggatgtggattccggcgga
gagggagggggtggcgggggggagcaccaccaccaccacattccccaaatccttacccta
caggaccccaacttcaagaccctgaccgtacccggagtgtccaaaactagccgtcagtgt
aaagttgctgaaaaagatgagaagaaacccaagaatatctggaccaatataaagaagttg
tactctcagagtgaggaggatgaagaggagatggagatcgcagtgagggcatggcctagc
cagtccagcatcctcagtggagacgatgggctaaaggagcgccctgcgtcttccgctagc
caggccagctacgtggtgaacgagcgcctacaggagctggtcaagatgtttaaggagagg
acagaaagggccaaagagaaactcatagacccagatcactctgatgatgacagtccaact
gcctcccctgcgagagctccaacaccacctcctgctcctccagaggagccgaaggaggag
gagataaaggagcagcaacccaagcctacattatgctgcaaggtgatgcctcctcgctgg
atcagagctctgctgcactaccgcttccccgctagcatcgaccccttcaccaatctggtc
tatgtgctgtggctgtttttcgtcaccttggcgtggaactggaacatgtggcttatcccg
gtgcgctgggccttcccctaccagacccccagtaacatctacctgtggctactcactgac
tatctgtgtgacctcatctacatcctggacatcctggtcttccagccccgcctgcagttt
gtccgcagtggagacatagtgtttgacaaaaaggacatgagagtgaattacatgaaaacc
ttccggttcaagatggatgtcatcagtcttgttccactggagttgttgtattttaaaact
gggatcaacccactcctccgcttcccacgactactaaagataatgtctttctttgagttc
aacgaccgtcttgagggcatccttaccaaagcctacgtttacagagtgatccggaccacc
acctacctgctgtactgcctgcactgtaatgcctgtctgtactactggggctctgcgtat
gaaggtctgggctccacgcagtgggtctatgacggacagggcaacagttacatccgctgc
tactactttgctgtgaagaccctaatcaccattggtggactgccggaccccacaacgctc
tttgaaatcatctttcagctcataaactactttgttggagtgtttgccttttccatcatg
attggacagatgagagatgtggttggtgcagccacagcaggacagacgtactacagagca
tgcatggacaacactgtcaactacatggcctcctaccgtatccctaaagacgtgcagaac
cgggttaaaacctggtacaactacacctggcagtcccagggcatgctggatgaacaggag
cttctggttcagctcccagacaagatgaggctggacatcgctgtggatgtcaactatgac
attgtcagtaaagtgtctctcttccagggttgcgatagacagatgatctttgacatgctg
aagagactgaggtctgttgtttacctcccaggggactatgtctgcaaaaagggtgaagtt
gggcgggaaatgtacatcatcaaagccggagaggtgcaggtggtgggcgggccagacggg
aagactgtgtttgtcacactgagggcggggtcagtgtttggggaaatcagcttgctggca
gttggtggagggaacaggagaacagcaaacgtagtggctcatggcttcgccaacctgttc
atcctggacaagaaggacctcaatgagattctagtgcattaccccgagtcccagaagctg
ctccgcaagaaggccaggaagatgctcacgaaagataagaagcctccgaaggagccggcc
caggtgatccctcctcgaacggtcacgcccaagctattcaaagctgctctggatgtggcg
catcagaaaacaggcctcaaagggaccctcggcaagattaaggagaagatcaacaaatcc
agcgtttctctacagccctccatgtcctcctccctgcctcccttgtccccagtctctcca
gtctccagtctggacccagagcgcaaggctgacgccacgtcaccaaccttagacagctcc
acgctgctctgccccgtctcccattgtcacggagatgagacactctccaaggagcagggc
caagtggagggagaagttgcaggagagagtgggaagaagaaagaaaagagaaaggcatga
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