Oncorhynchus keta (chum salmon): 118396662
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Entry
118396662 CDS
T09424
Symbol
nup93
Name
(RefSeq) nuclear pore complex protein Nup93 isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118396662 (nup93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118396662 (nup93)
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118396662 (nup93)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
RESC9_N
Motif
Other DBs
NCBI-GeneID:
118396662
NCBI-ProteinID:
XP_035646871
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All DBs
Position
17:complement(23400488..23453296)
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AA seq
844 aa
AA seq
DB search
MSFWKTRHHPITVDLRSAGVKLVAMEAEGFGELLQQAEQLAAETEAVSELPHVERNLQEI
QQAGERLRSRTLTRTSQDAADVKASILLGSRGLDIFHISQRLESLSAATTFEPLEPVKDT
DIQGFLKNERDNALLSAIEESRRRTFLLAEEYHRESMLVQWEQVKQRVLHTLLGAGEDAL
DFSQDIEPSFVSDAGVPGRSALDSVEVAYGRQIYVFNEKIVNGHVQPNLGDLCASVADSL
DDKNVSDMWLMVKQMTDVLLVPAKDTLKSRTALDMQMAFVTQALQFLQNSYKNYTMVTVF
GNLHQAQLGGVPGTYQLVRSFLNIKLPGPLPGMQDGEVEGHPVWALIYYCLRCGDLGAAM
QVVNRAQHQLGDFKTWFQEYMNSPDRRLAPATENKLRLHYRRVLRNCADPYKRAVYCLIG
KCDIADNHGEVADKTEDYLWLKLNQVCFDDDGSSAPQDRLTLAQLQKQLLEDYGESHFSA
SQQPFLYFQVLFLTAQFEAAVAFLFRVERLRSHAVHVALVLYELRLLLKSSGQSAQLLSQ
EAGDPPMVRRLNFIRLLMLYTRKFESTDPREALQYFYFLRNEKNNQGENMFMCCVSELVI
ESREFDMLLGRLEKDGSRKPGVIDKFAGDTRAIITKVALEAENKGLFEEAVRLYELAKNP
DKVLELMNRLLSPVIAQVSAAQSNKERLKNTAVAIAERYRTQGVAGEKSADSTFYLLLDL
MTFFDEYHAGNIDRAYDVMERLKLVPLSQDSVEERVAAFRNFSDEVRHNLSEVLLATMNI
LFTQCKRLKGAAAGTPGRPQRSIEDRDSQLRSQARALITFAGIIPYRMAGDTNARLVQME
VLMN
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttttggaaaacgagacatcatccaatcaccgtagacctcagaagtgccggggta
aaattggttgccatggaagcggagggctttggagaactcctgcagcaggcagagcagctt
gcagcagagactgaggccgtgtctgagcttcctcatgttgagaggaaccttcaggagatc
cagcaggctggagagaggctacgctcccgcaccttaactcgaacatcacaagacgctgct
gacgtgaaagcgtccatcctccttgggtccagaggcctggacatcttccacatctcccag
cgtctggagagcctgagtgctgccaccacctttgaacctctagagccagtgaaggacact
gacatccagggctttctgaagaatgagagggacaatgcgctgctctctgccatcgaggag
tcacgtcgcaggacgttcctcttggcagaggagtaccaccgcgagtccatgctggttcag
tgggagcaggtgaagcagagagtattgcacaccctgttgggagcaggggaagatgctctg
gacttcagccaagacatagagcccagctttgtgagtgacgcaggagttcctggacggagt
gctcttgacagcgtggaggtggcctatggacgacagatctacgtttttaatgagaagata
gtgaatggacatgtccagcccaacctgggagacctctgtgcctcagtggcagacagcctg
gatgacaagaatgtgtcggacatgtggttaatggtgaagcagatgacagacgtgctgctg
gtcccagccaaagacacgctgaagagccgcacggccttggacatgcagatggctttcgtc
acgcaggccctgcagttcctgcagaacagctataagaactacaccatggtgacggtgttt
gggaacctgcaccaggcccagctaggaggagtccctggcacctatcagctggtgcgcagc
ttcctcaacatcaaactgccagggcctctgccaggcatgcaggatggtgaggtggagggt
cacccagtctgggctctgatctactactgcctgcgctgtggggacctgggcgctgccatg
caggtggtgaaccgggctcagcaccagctgggagacttcaagacctggttccaggagtac
atgaacagccctgacagacgcctggcccccgccacagagaacaagctgcgtctccactac
cgcagagtgctgaggaactgtgctgacccctacaagagggccgtctactgcctcatcggg
aagtgtgacatcgcagacaaccatggagaggtggccgacaagaccgaggactacctgtgg
cttaagctcaaccaggtgtgcttcgatgacgacggcagcagtgctcctcaggatagactg
acattggcccagctacagaaacagcttctagaggactacggagagtcccacttctcagcc
agccaacagccattcctgtacttccaggtgctgttcctcacggcccagtttgaggctgct
gtggccttcctgttccgggtggagcgtctacgcagtcatgcagttcacgtggctctggtt
ctctacgagctacggctgctgctcaagtcatcagggcagagcgcacaactgttgagtcag
gaagctggggacccccctatggtgcgtcggctcaacttcatccggctgctcatgctctac
acgcgcaagtttgagtccacagacccccgggaggctctacagtacttctacttcctacgg
aatgaaaaaaacaaccaaggagagaacatgttcatgtgctgtgttagcgagctggtgatt
gagagtcgagagtttgacatgcttctaggaagactggaaaaagatggcagcagaaagcct
ggagtgatagataaatttgccggagacactcgagccattatcacaaaagtggcgctggag
gctgagaacaagggcctgtttgaggaagcagtaagactgtatgagctggccaagaatcca
gacaaggtcttagagctgatgaacaggctgctgagtcctgttatcgcccaagtcagcgct
gcccagtccaacaaggagagactgaagaacactgctgttgccatcgctgagcggtaccgg
acccagggtgttgctggagagaagtctgcagacagcaccttctacctgctgctggacctc
atgaccttctttgatgagtaccatgctggaaacatagaccgggcctacgatgtgatggag
agactgaagctggtccctctgagtcaagacagtgtggaggaaagggttgctgcatttcgc
aatttcagtgatgaggtcaggcataatctgtcggaggtactcctggccaccatgaatatc
ctgttcacgcagtgcaagcgcctgaagggggccgcagcaggaaccccaggtcgaccacag
aggtccatcgaggacagagactcgcagctgcgcagccaagcccgtgcactgatcacgttt
gctggaattatcccgtaccgcatggcaggcgacaccaatgcccggctggtgcagatggag
gtcctgatgaactga
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