Oncorhynchus keta (chum salmon): 118396851
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Entry
118396851 CDS
T09424
Name
(RefSeq) short transient receptor potential channel 4-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118396851
Ion channels [BR:
oke04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118396851
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
Ank_5
Egg_lysin
BAR_4
CCDC22_CC
Motif
Other DBs
NCBI-GeneID:
118396851
NCBI-ProteinID:
XP_052323471
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All DBs
Position
18:complement(17632720..17660064)
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AA seq
938 aa
AA seq
DB search
MSRLYYRRTDNSSYRDRIALRIVRAESELSVLEKNYLGAVDKGDYASVKQALEEAEIYFR
ININCIDPLGRTALLIAIENENLEIIELLLSFNVYVGDALLHAIRKEVVGAVEMLLNHKK
PSGEKQVPPILLDKQFSNFTPDITPIILAAHTNNYEIIKLLVQKGVSMPQPHEVRCNCME
CVSSSDVDSLRHSRSRLNIYKALASPSLLALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSQQCKQFAKDLLDQTRSSRELELILNYRDDINPLLDENTNDLARLKLAIKYTQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAGKFLTCVFIGLLFPLLSLCYLVSPKSRYGHFIR
KPFIKFICHTTSYLTFLFLLLLASQHIVSTDPNRQGPPPTVVEWMILPWVLGFIWTEIKQ
MWDGGFQDYIHDWWNLMDFVMNSLYLATISLKFVAYVKYSGFRARNEWQMWHPTLVAEAV
FAIANIFSSIRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YETDEGLKGCKGIRCATQNNAFSTLFETLQSLFWSIFGLISLYVTNVEADHQFTEFVGAT
MFGTYNVISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGGTLPSPFNI
IPSPKSIWYFICWIRKHIFKITRAKKTETFGTIGRRAALNVRTNHQYQEVLRNLVKRYVA
AMIRDAKTEEGLTEENFKELKQDISSFRYEVLGMMKGKVGPGGGGVAESKPSEEAGASIL
VYPDHSFKYSPKFSPATPKTNMFPDTTSILQQRAALSSTSSTSPSNSQGLNRLVNGSVVP
SWASTDTSSSPTSSTPISSSSSTPISYSSSTPIQCSTKDRLARKDFPKDICDFGLYSVSE
EMGEVHLEELDCDGEKEEQGGARERTCTEKEENEGRGE
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgactgtactacaggaggacagacaactcctcctacagggaccggatcgctctg
aggattgtcagggctgagtctgaactgtctgtcctggagaagaactacctgggagcagtg
gacaaaggagactatgcctcagtcaaacaggctctagaggaggcagagatctacttccgg
atcaacattaactgtatagacccgttgggccgcacagctctgctgatcgctattgagaat
gagaacctggagattatagagctgctgctcagctttaacgtgtacgtcggtgacgctctg
ctacacgccatccgtaaagaggtggtgggggccgtggaaatgctgctcaaccacaagaag
cccagcggggagaaacaggttcctcccatcctattggacaagcagttctctaactttact
cctgacatcacacccatcatcctggcagctcacaccaacaactatgagatcatcaaactg
ctggtgcagaagggggtgtccatgccccagccacatgaggtgcgctgtaactgcatggag
tgcgtgtccagctctgatgtggatagtctgcgtcactcccgctcacgtctaaacatctac
aaggcccttgctagcccatcactcctggctctctccagtgaagaccctttcctcacagcc
ttccagctctcctgggaactacaggaactcagcaaggtagagaatgagtttaagtcggag
tatgaggagttatctcagcagtgtaaacagtttgccaaggacctgttggaccaaaccaga
agttccagagaactagagctgatcctgaactacagagatgacatcaaccctctactggat
gagaacaccaacgatctggccagactcaaactggctatcaaatacacacagaaagagttt
gtagcccagcctaactgtcagcagctgcttgcgtctcgttggtacgatgagttccctggg
tggaggcgtcgtcactgggcagggaagttcctaacctgtgtcttcatcggcctcctcttc
cccctcttatccctctgctacctggtctctcctaagagccgctatggacacttcatcagg
aagcccttcatcaagtttatctgccacacaacgtcgtatctcaccttcctgttcctactg
ctgctggcctcccagcacatcgtctctacagaccctaacagacaggggccgcctcctact
gtggtggaatggatgatactaccctgggtactgggcttcatctggacagagattaaacag
atgtgggatggagggttccaggactacatccatgactggtggaacctcatggactttgtt
atgaactctctgtacctggctaccatctctttgaagttcgttgcctacgtcaagtacagt
ggcttcagggccaggaacgaatggcagatgtggcatcctaccttggtagcagaggctgtg
tttgccatcgctaacatcttcagctccatccgcctcatctctctgtttacagctaactcc
cacctgggacctctacagatctctctgggcaggatgctgctagacatccttaagttcctg
ttcatctactgcctggtgcttctggccttcgctaacgggctcaaccagctctacttctac
tacgagacagacgagggactgaagggatgcaagggcatccgctgcgcaacacagaacaac
gctttctcaacgttgtttgagacgctccagtcgttgttctggtctatctttgggttgatc
agtctgtatgtgaccaacgtggaggcagaccaccagttcacagagttcgtaggggccacc
atgtttggaacctataatgtcatctctctggtggttctactcaacatgctgatcgccatg
atgaacaactcctaccaacatatcgctgatcatgcagacattgagtggaagtttgcaaga
accaagttgtggatgagttactttgaagagggagggactctaccttctccattcaacatc
attcctagccccaagtcaatctggtacttcatctgctggatcaggaaacacatcttcaag
atcaccagggccaagaaaacagaaacatttggaaccatagggagacgggctgccttaaac
gtaagaacaaaccatcagtatcaggaggttttgaggaacctggtgaagagatatgtagca
gccatgatcagagatgccaagacagaggaaggactgactgaggagaactttaaggagctg
aagcaggacatctccagctttaggtatgaggtcctggggatgatgaaggggaaggtgggg
cccgggggtgggggcgtggcagaaagtaaacccagtgaagaggcaggggcctccattctg
gtctaccctgaccactccttcaagtactcccccaagttctccccagccacgcctaagacc
aacatgtttcccgacaccacatccatactccagcagagagcagccctctcctccacctcc
tccacatccccttccaactctcaaggcttgaaccgactggtcaacggctctgtggtaccc
tcttgggcctccactgacacctcctccagccccacctcctccactcccatctcctcttcc
tcctccactcccatctcctattcctcctccactcccatccaatgctccaccaaagacagg
ctggccaggaaagactttcccaaagacatctgtgactttgggctctactctgtgtctgag
gagatgggagaagttcacctggaggagctggactgtgatggagagaaggaggagcagggt
ggagcgagggagaggacgtgtacagagaaggaagagaacgaagggaggggagagtga
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