Oncorhynchus keta (chum salmon): 118401031
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Entry
118401031 CDS
T09424
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
118401031
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118401031
Ion channels [BR:
oke04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
118401031
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
118401031
NCBI-ProteinID:
XP_035654070
LinkDB
All DBs
Position
22:10527115..10560974
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AA seq
1336 aa
AA seq
DB search
MFNWVVKVVPQPPDAPGSLGQETVNPTPASLQKVSKGEVKKEVNAKPAKLKEEDISEDNG
IQSQSGVMTWLSNGFTSALPQPTGSPNLSRSNSVSRLLQEVQREDERNGVIKWIAEGLSK
VVPQPDDKYREDIREEEEETEVYNMKDVPDAEPLPHIPVVEIFSDDEEEDRVPQFPLKVV
NWIKNVIPQPVMLPAGYVEAQSKAQSKRSSLDKVLSPPPESLKGDEDSQNSNVVGWFVTG
LGLKMPQPVARSRDDVEVVQNISKQPKAVDLVLEEVVEADLKDLNQEVPSKAMQSEPPQP
FKPAQTTQPTQTTQSQPAQPKQPVKPEEPEQTLPNVPESTTPSLEDAETQTGRWTPFIES
IKREAEGVAMATMEERMTQERVDLVRMAEEVARHTAETAIRQMQEAQSIKLSIHSQEAIL
EEDEDPECQVCKEQPVDAAKSAAQSERDFASPDVEPEPQEELESQRASPSPPPSPEPDPV
KRAEPEPKPEPQEELESQRASPSPPPSPEPDPVKRAEPEPKPKAQDAKVAPEPVTQQPQK
AEGAEDGTAPDTTTKEEGETAEGGGCGASSRLSVHPAVNVEDVDSGGGGHRRHIRQILTP
QDPNLKTLTVPRVSKASRQSKVADKEKNLHSQSEDDDEEETETAVRAWPSQSSILSGDDG
LKERPASSASQASYVVNERLQELVKMFKERTERAKEKLIDPDDSDDDSPTASPARAPTPP
PAPPEEPEEEAQPASPEREMEEQQPQSRLCCKVTPPRWIRALLQYRFPSSIDPFTNLVYV
LWLFFVTLAWNWNVWLIPMRWAFPYQTPSNIYLWLLADYLCDLIYILDIMVFQPRLQFVR
GGDIVFDKKDMRKNYMKTFRFKMDVISLVPLELFYFKTGINPLLRFPRLLKVMSFFEFND
RLEAILTKAYVYRVIRTTSYLLYCLHCNACLFYWISAYEGLGSTKWVYDGKGNSYIRCYY
FAVKTLITIGGLPEPTTLFEIIFQLINYFVGVFAFSIMIGQMRDVVGAATSGQTYYRACM
DNTVKYMASYRIPKDVQNRVKTWYNYTWQSQGMLDEQELLVQLPDKMRLDIAVDVNYDIV
SKVSLFQGCDRQMIFDMLKSLRSVVYLPGDYVCKKGEVGREMYIIKAGEVQVVGGPDGKT
VFVTLKSGSVFGEISLLAVGGGNRRTANVVAHGFANLFILDKKDLNEILVHYPESQKLLR
KKARNMLTKDKKPKEPAQVIPPRTETPKLLKAALEMAHQKTGLKRTLAKIKENTNISSIS
LEPSMSSSLTPLSPVTPVSSLDPERKSSIMSPTSDSSTWLHPASHCHRGETLSKEQDNVA
EEEAGESGKRKEKRKP
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactgggtggtgaaagtggttcctcagccccctgacgcccctggctctctggga
caggagacagtcaatcccacacctgcatccctacaaaaagtgtctaaaggtgaagtcaaa
aaagaagtcaatgcaaaaccagccaaactgaaggaagaggatatttcagaggacaatggt
attcagagtcagagtggagtgatgacctggctctccaatggcttcaccagtgctctgcct
caaccaacaggcagccctaacctcagcagatccaactctgtatccaggttactgcaggag
gtacaaagagaggatgaaaggaatggggtgattaagtggattgcagagggactgagcaag
gtggtgcctcagccggatgacaagtacagagaggatattcgagaggaggaggaggagaca
gaggtttataacatgaaagatgtgccagacgcagagcccctcccacacatacctgtggtg
gagatcttttcagacgatgaggaagaggatcgggtaccacagttccccctcaaagtggtt
aactggattaagaatgttattcctcagcctgtgatgctccctgcaggttacgtagaggcc
cagagtaaggctcagagcaagaggtcatctcttgacaaagttttgtcgccacctcctgag
tctctcaaaggtgacgaggactcacaaaactccaatgtcgtgggctggtttgtgacgggc
ctcggcctcaagatgccacagcctgtcgcaagatcaagagatgacgttgaagttgtgcag
aatatctctaaacaacccaaagcagtggatctggttctggaggaagtagtagaagcagac
ttgaaggatctgaatcaggaagtgccatccaaggctatgcagtcagaaccaccacagcct
tttaagcccgcacagacgacacagccaacacagacgacgcagtcacagccggcacagcca
aaacaaccagtgaaaccagaagagcctgaacagactcttccaaatgtgccagagtctaca
acaccatcgctggaggatgctgagactcagacgggcaggtggactcccttcatagagagc
atcaagagagaggctgagggcgtagctatggctaccatggaggaacggatgacccaggag
cgcgtggatttggttcgaatggcagaggaggtggccagacacacagctgagacagccatc
aggcagatgcaagaggcacaatcaatcaagctttccattcacagccaggaagccattctg
gaagaagacgaggacccagagtgccaggtgtgtaaggagcaaccagtggatgcagcaaag
agtgccgctcagtcagagcgcgactttgcatcacccgacgttgaaccagagccccaggaa
gagctagagtcccagagggcctctccatcccctcctcccagcccagaaccagatccagtc
aagagagcagagcctgaacctaaaccagagccccaggaagagctagagtcccagagggcc
tctccatcccctcctcccagcccagaaccagatccagtcaagagagcagagcctgaacct
aaaccaaaggcccaggatgccaaagtagcacctgaaccggtgacccaacaaccacagaaa
gcagagggggcagaggacggaaccgcacctgacaccactaccaaggaggagggggagact
gcagaggggggtggctgtggtgcgagctccaggctcagtgtgcaccctgctgtcaacgtg
gaggatgtggattcaggcggaggggggcaccgtcgacacattcgccaaatcctcaccccc
caggaccctaacctcaagaccctgaccgtacccagagtgtccaaagccagccgccagagc
aaagttgccgataaagaaaagaacctgcactctcagagtgaggatgatgatgaagaggag
actgagaccgcagtgagggcgtggcctagccagtccagcatcctcagtggagacgatggg
ctaaaggagcgacctgcgtcgtccgctagccaggccagctacgtggtgaacgagcgccta
caggagctggtcaagatgtttaaggagaggaccgagagggccaaagagaaactcatagac
ccagatgactctgatgatgacagtcccactgcctcccctgcgagagctccaacacctcct
cctgcacctccagaggagccggaggaggaagcacaaccagcctcccctgagagggagatg
gaggagcagcaaccccagtctagactgtgttgcaaggtgacgcctcctcgctggatcaga
gccctgcttcagtaccgcttcccctctagcatcgaccccttcaccaatctggtctatgtg
ctgtggctatttttcgtcaccttggcgtggaactggaacgtgtggctgatcccgatgcgc
tgggccttcccctaccagacccctagtaacatctacctgtggctgctagccgactacctg
tgtgacctcatctacatcctggatatcatggtcttccagccccgcctgcagtttgtccgc
ggtggcgacatagtgtttgacaaaaaggacatgcgaaagaattacatgaaaactttccgg
ttcaagatggatgtcatcagtcttgtgccactggagttgttctattttaaaactgggatc
aacccactcctccgcttcccacggctactaaaggtaatgtctttcttcgagttcaacgac
cgtcttgaggccatcctgaccaaagcctacgtttacagagtgatccggaccaccagctac
ctgctgtactgcctccactgtaacgcctgtctgttctactggatctctgcgtatgaaggt
ctgggctccacgaagtgggtctatgatggaaagggcaacagttacatccgctgctactac
tttgctgtgaagactctgatcaccattggtggactgccggagcccacaacgctctttgaa
atcatctttcagctcatcaactactttgttggagtgtttgccttttccatcatgatagga
cagatgagagatgtggttggtgcagccacttccggacaaacgtactacagagcatgcatg
gacaacactgtcaaatacatggcctcctaccgtatccccaaagacgtgcaaaaccgggtc
aaaacctggtacaactacacctggcagtcccagggcatgctggatgaacaggagcttctg
gtccagctcccagacaagatgaggctggacatcgctgtggatgtcaactatgacattgtc
agtaaagtctctctcttccagggttgcgacagacagatgatctttgacatgttaaagagt
ctgaggtctgtcgtttacctcccgggggactatgtctgcaaaaagggcgaggttggacgg
gagatgtacatcatcaaggccggggaggtgcaggtggtgggcgggccagacggaaagacc
gtgtttgtcacactgaagtcggggtcagtgtttggggaaatcagcttgcttgcagtgggt
ggaggaaacaggagaacagccaacgtagtggctcatggcttcgccaacctgttcatcctg
gacaagaaggacctcaatgagattttagtgcattaccccgagtctcagaagctgctccgc
aagaaggccaggaatatgctgacaaaagacaagaagccgaaggagccggcccaggtgatc
cctcctcggacagagacacccaagctactcaaagctgctctggagatggctcatcagaaa
acaggcctcaaaaggacccttgcaaagattaaggagaacaccaacatatccagtatttcg
ctagagccctcaatgtcctcctccctgacccccctgtccccagtcactccagtctccagt
ctggacccagagcgcaagtctagcatcatgtccccaacctcagacagctccacgtggctc
caccccgcctcccattgtcacagaggtgagacgctgtccaaggagcaggacaacgtggcg
gaagaagaggcaggagagagtgggaagaggaaagaaaagagaaagccatga
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