Oncorhynchus keta (chum salmon): 127932317
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Entry
127932317 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec23A-like
KO
K14006
protein transport protein SEC23
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127932317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
127932317
Membrane trafficking [BR:
oke04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
127932317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
APP_E2
Motif
Other DBs
NCBI-GeneID:
127932317
NCBI-ProteinID:
XP_052383788
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All DBs
Position
10:71585645..71599299
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AA seq
807 aa
AA seq
DB search
MATYQEFIQQNEDRDGVRFSWNLWPSSRLEATRLVVPVSCLFTPLKERPDLPPVQYEPVL
CSRANCKAVLNPLCQVDYRAKIWACNFCFQRNPFPPSYAGISDVNQPAELMPQFSTIEYI
VQRGPPNPLIFLYVVDTCLEEEDLQALKESLQMSLSLLPPNALVGLITFGRMVQVHELSC
EGIAKSYVFRGTKELSSKQIQEMLGLTNPSASGPQGRPAAPQDPAVTCRFLQPVHKVDMN
LTDLLGELQRDPWPVPQGKRPLRSTGIALSIAVGLLEGTFPNTGARVMMFMGGPPTQGPG
MVVGDELKTPIRSWHDITKDNARHLKKATKYYDALANRAAVNGHSIDIYACALDQTGLLE
MKCLSNLTGGHIAMGDSFNTSLFKQTFQRVFSKDHNGEFRMAFGGTLEVKVSRELKVSGA
IGPCVSLNAKGPCISENEVGVGGTTQWKICSLSPSTTLALYFEVVNQHNAPIPQGGRGAV
QFVTQYQHSNTQRRIRVTTVARNWADAQSQIQHIESSFDQEASAVIMARLGVFRAESEEG
PDVLRWLDRQLIRLCQKFGQFNKDDPTSFKLSESLSLYPQFMFHLRRSPFLQVFNNSPDE
CSYYRHHFVCQNLTQSLIMIQPILYSYSFHGPPEPVLLDSGSILPDRILLMDTFFQLVIY
HGEVRVTPTHNILPWRKAGYQEQPEYENFKHLLVAPVDDAQEILQTRFPMPHHIDTEHGG
SQARXLLSKVNPSQTHNNLYSWGQETGAPILTDDVSLQVFMDHLKKLAVSSAIISQSRDQ
SDRLVIRPICPPFYFTSPYVWLTRRPK
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggcgacataccaggagtttatccaacagaatgaggatcgggatggcgtgcgttttagc
tggaacctgtggccctcgagcaggctggaagctacccggctggtagtgcctgtctcctgc
ctcttcaccccactcaaggagaggccagacctgccaccggtgcagtacgaaccggtcctc
tgtagcagggccaactgcaaggccgtactaaacccgctatgccaagttgactacagagcc
aaaatatgggcgtgcaacttctgcttccaaagaaacccattccccccgtcatacgccggc
atatcggacgtaaaccagccggctgagctcatgccacagttctcaaccattgagtacata
gtgcagcgcggccccccgaaccccctcatcttcttgtacgtggtggacacgtgtctggag
gaggaggatctgcaggccctgaaggagtccctgcagatgtccctgtccctgctgcccccc
aacgccctggtcggcctcatcaccttcggacgcatggtgcaggtccacgagctgagctgc
gagggaattgcaaagagctacgtgttcagaggaaccaaggagctttcctccaaacagatc
caggagatgctaggcctgacgaacccatcggcatctgggcctcaaggtcgtcccgcggcc
cctcaggatccagccgtcacctgtcggttcctgcagccagtccataaggtagacatgaac
ctgacagacctgttgggagagctgcagagagatccctggcctgtaccacaggggaagaga
ccactgcggtctactggaatagcactgtccatcgccgtgggcctgctggagggtacgttt
cccaacacaggggcccgtgtgatgatgttcatgggcggaccccccacccagggccccgga
atggtggtgggagacgaactcaagacccccatccgctcctggcatgacatcaccaaggac
aacgcacggcatctgaagaaagccaccaagtactacgacgccttggcgaaccgtgcggca
gtgaacggccacagtattgacatctacgcctgtgccttggatcagaccggacttctagag
atgaaatgtttatccaacctcactggaggtcacatagcgatgggcgactccttcaacacc
tctctgttcaagcagaccttccagagggtgttcagtaaggaccacaacggagagttccgc
atggccttcggaggcacgctggaagtcaaggtgtccagggagctgaaggtatcgggggcc
atcgggccctgtgtctccctcaacgctaagggaccatgtatatcagagaacgaggtcggt
gttggaggaacaacccagtggaaaatctgcagtctcagtccctccacgacgttggccttg
tacttcgaggtcgtcaatcagcacaacgccccaatccctcagggtggtagaggagcggtc
cagtttgtcacccagtaccaacactccaacacccagaggaggatcagggttaccaccgtc
gccaggaattgggccgacgcccagtcccagatccagcacatcgagtcgtccttcgaccag
gaggcgtcggcggtcatcatggccaggctgggcgtgttcagggccgagtcggaagagggg
ccggacgtcctgcgctggctggacagacagctcattcgcctgtgtcagaaattcggtcag
ttcaacaaagacgaccccacctccttcaagctctcggagtccctctcactctacccacag
tttatgttccacctgcggcggtcgccgttcctgcaggtgttcaacaacagcccagatgag
tgttcctactacagacaccactttgtctgccagaacctgacccagtctctcatcatgatc
cagcccatcctgtactcttactccttccacggaccaccggagcctgttctcctggacagt
ggcagtattctccccgaccggatcctcctcatggacaccttcttccagctggtcatctac
catggagaggtgagagtaacaccaacacacaacatcctaccatggcgtaaggcgggttac
caggagcagccggagtacgagaacttcaagcatctactggtagcacctgtggatgacgcc
caggagatcctgcagacccgcttccccatgccccaccacatcgacacagagcacggaggg
tcccaggcccgcntcctcctgtccaaggtcaacccctcccagacacacaacaacctctac
tcctggggacaggagaccggagcccccatcctcacagacgacgtcagtctacaggtgttc
atggaccacttgaagaagctggccgtgtcgagcgccataatttcccagtcccgggaccaa
agtgatcgcctcgtgatcagaccgatatgcccaccgttctatttcacttcaccatacgtc
tggttgacgaggcgaccaaagtga
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