KEGG   Oncorhynchus kisutch (coho salmon): 109866370
Entry
109866370         CDS       T09179                                 
Name
(RefSeq) crooked neck-like protein 1
  KO
K12869  crooked neck
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109866370
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oki03041]
    109866370
   03036 Chromosome and associated proteins [BR:oki03036]
    109866370
Spliceosome [BR:oki03041]
 Complex B
  Other components
   Prp19-related factors
    109866370
 Complex C
    109866370
Chromosome and associated proteins [BR:oki03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Other centrosome duplication proteins
     109866370
SSDB
Motif
Pfam: HAT_PRP39_C HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_Syf1_CNRKL1_C HAT TPR_14 Suf TPR_19 TPR_CcmH_CycH TPR_16 U3_assoc_6 Mad3_BUB1_I
Other DBs
NCBI-GeneID: 109866370
NCBI-ProteinID: XP_020310604
Ensembl: ENSOKIG00005042567
UniProt: A0A8C7N2R4
LinkDB
Position
LG21:12081545..12087781
AA seq 822 aa
MASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPKQKITDEEELND
YKLKKRKGFEDNIRKNRTVISNWIKYAQWEESLKEVQRARSIYERALDVDHRNIALWLKY
AEMEMKNRQVNHARNIWDRAITILPRVNQFWYKYSYMEEMLGNIAGCRQVFERWTEWEPE
EQAWHSYINFELRYKEVDKARSIYERFVIVHPDVKNWIKYARFEEKHGYIAHGRKVFERS
VEFFGEEHVNENLFVAFARFEEKQKEFERVRVIYKYALDRIPKHQAQELFKFYTVFEKKF
GDRRGIEDVIVSKRRFQYEEEVKASPHNYDAWFDYLRLVESDADPDTAREVYERAIANIP
PIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLDLIPHKKFTFAKIWLLYGQF
EIRQKNLQAARRGLGTAIGKCPKNKLFKGYIELELQLREFDRCRKLYEKYLEFAPENCTT
WIKFSELETILGDTERARAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEFDNTRGLYQRL
LQRTQHVKVWISYAQYELSIDTSDRLQRCRGIFEEGNKGLRSCEEKEERLMLLESWKEFE
QEFGSDTTRERVKKLLPEKVKKRRKLTAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMA
KMWKRQQQEEDEEEEDEEDENNGGVVRGSGKEMEEEDDRSVERDGEENGRGERSRDKEME
EEDDRRVERDGEENGRGERSRDKEMPEDSASPSENPMVSEPVPEKDSKESTCDDSDDSDE
SSSSSSSSSSSSSSSSGSSSSDRDKDGSEKQPRKSKKDSVND
NT seq 2469 nt   +upstreamnt  +downstreamnt
atggcatccactgcagcagggaaacagaggataccgaaagtggctaaggtgaaaaacaag
gctccagcagaggtacaaatcacagctgagcagttgctcagggaggcaaaggagagggag
ctcgagcttttgccaccgccgcccaaacagaaaatcactgatgaagaagagttgaacgat
tacaagttgaagaagcggaagggatttgaagacaacatcagaaagaatcgtactgttatc
agcaactggataaaatacgcacaatgggaggagagcctgaaagaagtccagagggctcgc
tctatttacgagcgtgctctggatgtagaccaccggaacattgctctatggctgaagtat
gctgagatggagatgaagaaccggcaagtgaaccacgcccgcaacatttgggacagagcc
atcaccatcttgcctcgtgtcaaccagttctggtacaagtacagttacatggaggagatg
ctgggcaacattgctggctgcagacaggtgtttgagcgctggacagagtgggaaccagag
gaacaagcctggcactcctacatcaacttcgagctgcgctacaaggaggtcgacaaggcc
cgctccatctatgagagatttgtgattgtccaccctgacgtaaagaattggatcaagtat
gcccgttttgaagagaagcatggctacatcgcccacgggaggaaggtgtttgagagatca
gtggagttctttggcgaggagcatgtcaacgagaacctctttgtggccttcgccagattt
gaagagaaacagaaagagtttgagcgtgttcgagtcatctacaaatacgccttggacaga
atccccaagcatcaggctcaggagctcttcaaattctacacagtatttgagaagaagttt
ggagaccggaggggaattgaggacgttatcgtcagcaagcggagatttcagtatgaggag
gaagtcaaggcaagcccacacaattacgacgcttggtttgattacctacgcctggtggag
agtgatgcggatcctgacactgccagagaggtgtatgagagagccatcgccaacatccct
cctatacaggagaagaggcactggagaagatacatttacctgtggataaactatgcttta
tatgaagaactggaggtcaaggacccggagagaacaagacaggtgtaccaggcatgtctg
gatctcatccctcacaaaaagttcacatttgccaagatttggctactctacggacagttt
gaaatccgccagaagaaccttcaagctgccaggcgaggcttgggcacagccattggtaaa
tgtccaaaaaacaagctgttcaagggctacattgagctggagctgcagctccgagagttt
gaccgatgcagaaagctctacgagaagtacctggagtttgccccagagaactgcaccacc
tggatcaagttctctgagctggagaccattctaggagacacagagagggcccgggccatc
ttcgagctggccatcggacagccacgactagacatgccagaggtgttgtggaagtcctac
atcgactttgaaattgagcaggaagagtttgacaacaccagaggcctctaccagagactt
ttgcagcgcacacagcacgtaaaggtctggatcagctatgcccagtatgagctgtccatc
gatacctcggaccggctgcagaggtgtagggggatctttgaggagggcaacaagggcctg
agaagctgtgaggagaaggaggagcgtctgatgttgttggagtcgtggaaggagtttgag
caggagtttggttcggacacgaccagggagagggtaaagaaactgctgccggagaaggtg
aagaagaggagaaagctcacagcagaggacgggtcggatgcagggtgggaggagtactac
gactatatcttccctgaggatgcagccaaccagcccaacctcaagctgctcgccatggcc
aagatgtggaagaggcagcaacaagaagaagacgaggaggaagaagatgaggaagacgaa
aacaacggaggagtggttagaggtagtggcaaagaaatggaggaagaagatgacagaagt
gtggagagagatggagaagaaaatggaagaggggagaggagtagagacaaagaaatggaa
gaagaagatgacagaagagtggagagagatggagaagaaaatggaagaggggagaggagt
agagacaaagaaatgcccgaagactctgcatcaccatcagaaaatcctatggtcagtgag
cctgtgcctgaaaaagactccaaagagagcacatgtgatgacagcgatgattctgatgaa
agcagcagcagcagcagtagtagtagtagtagtagtagtagtagtagtggcagcagcagt
agtgatcgtgacaaagatggcagtgagaaacagcccaggaagagcaaaaaggattcagtg
aatgattag

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