Oncorhynchus kisutch (coho salmon): 109870343 Help Entry 109870343         CDS       T09179                                  Name (RefSeq) protocadherin-15 isoform X1   KO K16500   protocadherin-15 Organism oki  Oncorhynchus kisutch (coho salmon) Brite KEGG Orthology (KO) [BR:oki00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:oki03037]     109870343    04515 Cell adhesion molecules [BR:oki04515]     109870343 Cilium and associated proteins [BR:oki03037]  Primary cilia and associated proteins   USH complex and associated proteins    109870343 Cell adhesion molecules [BR:oki04515]  Cadherins   Protocadherins    109870343 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin ECD PCDH15_12th Cadherin_FAT4_N Cadherin_CELSR2_9th Motif Other DBs NCBI-GeneID:  109870343 NCBI-ProteinID:  XP_020316411 Ensembl:  ENSOKIG00005024144 LinkDB All DBs Position LG25:complement(14550088..14759566) Genome browser AA seq 1723 aa AA seqDB search MQMRSWHFKWLGIWIGLLLLATCCLSQDTDDWQYDECKLSRTGPPATIVAIDEESPNGTL LVENMQIQGRAEDPGRTISLSLRDNYNHWVILDPVRQRLYLNSTGRALDRDPPSYIHSIV VQVQCTNELVGSIIRHEVRIVVRDRNDNTPQFQKPRYYVAINELTPVGTTIFSGFTGNNG ALDIDDGPNGQIEYIIQYNPTDPMANRTFDIPLTLSGSMVLRERLNYEEITRYLVIIQAN DRAPYPNERRTATTTLTVDVLDGDDLGPMFLPCSLVDNTRDCSPLTYRAHILELTDPSKV NPVNVTPIIQAVDQDRNIQPPSERPGILYSILIGKPEKYADFFSLNRTTAKLKLLKPLNR DLYQRFDLVIKAEQDNGHPLPAFANLQIEVLDENNQAPYFQDTTYQGFIIESAPVGTTLF ADVSLTTPLGIKVLDNDIEEMKDPMVQISLDNYNTIFMLTPSGITRYLTLLKPVDREEQD SYTFTMMASDGVQESPTVTVHITVIDANDNTPTFLNSSYSVNVYTDIQPGETVLQLTALD ADEGPNGLVTYKILAGNQGHFAINNRSGVITVMPGISLAVGRSYSLTVKAMDNGPESQRR SSITTVYIEVLPPNNQSPPRFPRLLYSLEVSEAMRTGATLLHLQAKDRERDPITYSIQSG DSHHLFELSRTSGLLVLGKPLDRETEDHYTLVVTASDGHPEGTSTATVNVVVTDVNDNDP VFDPLVPQNVTVTEEEANSFVGQVKATDPDAGVNGQVRYRLVNHADLFRVNSNGTISTAV PLDREVRGQYDLMVEAEDGAVEDPRRTTLTLSVTVLDVDDNSPVFSQPSYMVNLPENSPK NTVILQLTAKDSDLDSNVTFRIRTPEARQLFAVNPVTGELSVLQTLDFETLAATDHTFVV EALDSGGSMPPGLATVTVKITDMNDYSPVFSQVLYRGMVAPNAVKGTVVTTVHAEDLDPP GTPASRVRYRLDLDEDPYSGSIFDVNEVTGSVITRVNLNEEPNLVFSLIVVAYDDGEPVK VNKTLVVITVLQPSVIPVFTQEEYRFPPVSEMATVGKVVGVILAAAINQTIIYSIVEGNE EGVFRLNNSTGVFSTAKQLDYETNASYILKVEADSMEVVGSNLRAPSKTNTARVFIDVWD ENDHPPVFTKPLYLGGVAEDAKTFTSVLQVQALDKDTGNYSSMQYRIIIPPTTDGKDGFV IEPYTGVIKTAIMYRNMRRSYFKFEVVATDNYGEGGLSSKAEVVVSVVNLLDMQVVVSNV APTVVEQNKDKLLGILERYVQDQIPGAKVVVESIGPQRFGDGFEQEDYSKSDLMVYAIDP LTNRAISRQELFKFLDGKLLDINKEFQPYLGRGGRILEIRTPDVVTSVKKAVQTVGYTEG ALLALAIIIILCCIPAILIVIITYRQFKERQAECAKTARIQMALPTGKSVGAATNNLYEE LGDSAMRGYGHHEQQQLLRPSLLRPEELSMESGIDPGQDYYTQDYYNYDHGYELPQYGSR RKLISPTGLYDEYGEVIVDDDGSYYYSPQESEGEYGRKKRIKLVVDREYETSSTGEDSAP EPQRNRLSNLTNHSNINGSVYLAQNGSVIRTRRCVHSNNIKVNSPVRLGKHFKKLDKLAV THEERLPLNSPVATTSSVDKTLNTQPSSGSLASSTSGPESIASKSNIAKARSERSRNAEE QESPVDNEEVREPLESQSDRTQSDEEELWMGPWNNLHIPMTKL NT seq 5172 nt NT seq  +upstreamnt  +downstreamnt atgcaaatgaggtcatggcacttcaaatggttaggaatatggataggacttctgctgtta gccacgtgttgcctgtcacaagacacagatgactggcagtatgatgaatgcaaactctcc aggactggaccacctgccacaattgttgccatagatgaagagagcccaaatggaacgctt ttggttgagaatatgcaaatccaaggccgagcggaagacccaggtagaaccatctctctc tccctccgagacaactacaaccactgggtaatactggaccccgtcagacagaggctctac ctgaacagcaccggcagggccctcgaccgagatcccccctcctacatccattccatcgtg gtccaggtccagtgcaccaacgagctggtcgggagcatcattcgacacgaggtgcgcatc gttgtgagggatcgcaatgacaacacgccccagttccagaagcctcgctactatgttgcc ataaacgagttgaccccagttggcaccaccatcttctccggcttcactgggaataatgga gctctggacattgatgacggcccaaacggacagatcgaatacatcatccagtacaaccca actgacccgatggccaacaggacgtttgacatccctctcaccctttctggctcgatggtc ctgagggagaggctcaactacgaggagatcacccgctacctggtcatcatccaggctaat gaccgtgccccgtaccccaacgaacgacgcaccgccaccaccaccctgaccgtagacgtg ttggatggggatgacctggggcctatgttcctgccctgctccctggttgacaacacgcgt gactgcagccccctcacctaccgggcccacatcctggagctcactgacccaagcaaagtg aaccctgtcaacgtgacgcccatcattcaggccgtggaccaggacaggaacatccagcct ccctctgagaggccaggaatactctactccatcctcattggtaagcctgagaagtacgcc gacttcttctctctcaaccgaaccactgccaagctgaagctcctcaaaccactcaacagg gacctgtatcaaagatttgacttggtaatcaaggcagagcaggacaacggccaccccctg cctgcgtttgctaacctccagatcgaggttctggatgagaacaaccaggcaccatacttt caagacacaacataccagggcttcatcatcgagtcagcgccagtgggcaccacattgttc gctgacgtcagcctcaccacccccctgggcatcaaggttctggacaacgacattgaggag atgaaagatcccatggtgcagatatccttggacaactacaacacaatcttcatgttgaca ccttcggggattactcgctacctgacgctgctgaagcccgtggaccgtgaagagcaggac agctacacgttcacgatgatggcttcagacggagttcaggagagccctacagtgaccgtt catatcacagtgattgatgccaacgacaacacaccaaccttcctcaactcctcctacagt gttaatgtttacacagacattcagccaggggaaacagtattacagctgacggccctggat gctgacgagggccccaacgggctggtgacctacaagatcctggcggggaatcaaggccac ttcgccatcaataaccgctcgggagtgatcactgtgatgcctggcatctccctggccgtg ggacgctcctattccctgaccgtgaaggccatggataacggcccagagtcccagaggagg agctccatcaccactgtgtacattgaggtgctcccacccaataaccagagccccccacgc tttccccgcctcctctacagcctggaggtcagcgaggccatgaggaccggcgccactctc ctccacctgcaggcgaaggaccgtgaaagagatcctattacctatagcatccagagcgga gattcccaccacctcttcgagctctcccgaacgtcagggcttttggtcctgggcaaaccg ctggacagggagacagaggatcactacactctcgttgtaacagcctcagatggccatccg gaagggacctccacggctactgtgaatgttgtggtcactgatgtcaacgacaatgacccc gtcttcgatccactcgtgccccaaaacgtaacagttacagaggaggaggccaactctttt gtgggccaagtaaaggccacagatccagacgcgggggttaatggccaggtgcgctaccga ctagtcaaccacgccgacctcttcagggtcaactccaatggcaccatctccaccgccgtg cctctggaccgagaggtcaggggtcagtatgacctcatggtggaggcggaggacggagcg gtggaggaccccaggaggaccacgctgactctgtcggtgaccgtgctggatgtggatgat aacagcccggtgttctcacaaccatcctatatggtcaatctaccggagaatagtcctaag aacacagtcatcctgcagcttactgccaaagactctgacctggactccaacgtcaccttc cgtatacggaccccggaggccaggcaattgtttgctgtcaacccagtgactggagagctc tctgtgctgcagacgctggactttgagaccctggcagccacggaccacacctttgtggtg gaagccctggacagtggagggagcatgcccccaggcctggccactgtcactgtaaagata acggatatgaatgactactctccagtgttcagccaggtgttgtacaggggcatggtggct cccaacgcagtcaaggggactgtggtcaccacggtacatgcagaggacctagacccccct ggtacccctgccagccgtgtgcgttacagactggacctcgatgaggacccttacagtggc agcatctttgacgtgaacgaagtcacaggcagcgtcatcacacgtgtcaacctcaatgaa gagcccaatctagtgtttagtctaatcgttgttgcctatgacgacggggagccagtgaaa gtcaacaagaccctggtggttatcactgtcctgcagccctccgtcataccagtcttcacc caggaggaatacaggtttcccccggtgagtgagatggctacggtggggaaggtggtcggg gtcatcctggctgctgctatcaatcaaacaatcatttactctatagtggagggcaatgag gaaggcgtatttaggctcaacaacagcaccggggtgttctctacggccaagcagctggac tacgagaccaatgccagctacatcctcaaagtggaggctgactccatggaagtggtcggt tccaatctcagagcgccctccaagactaacacagcgagggtgttcattgatgtttgggat gagaatgatcaccctcctgtctttaccaaacccttgtacctgggaggagtggcagaggac gccaaaacattcacttctgtactacaagttcaggccctggacaaggacacagggaattac agctccatgcaatacaggattattatcccccccaccaccgacggcaaggacggctttgtc atcgagccctacaccggcgtcatcaagactgccattatgtacaggaacatgcgacggtcc tacttcaagtttgaagtggtcgccactgacaattacggcgagggggggctgagcagcaag gcagaggtggtggtatctgtggtgaatctgctggatatgcaggtggtggtctccaacgtt gctcctacagtggtggaacagaacaaggacaagctcctcgggatcctggagcgctatgtg caggaccagattcccggggccaaagtggtggtggaatccatcgggccacagcggttcggc gacggcttcgagcaggaggactactctaagtcggacctgatggtttacgccatcgaccct ctgaccaaccgggccatctcacgccaggagctattcaagtttctggatgggaagctgctg gacatcaacaaggagttccagccgtacctgggccgaggcgggaggatcctagagatccgc acaccggatgtggtgaccagtgtgaagaaggccgtgcagaccgtgggctacacagagggg gcgctgctcgccctagccatcatcatcatcctctgctgcatccctgccatcctcatcgtc atcatcacctacaggcaattcaaagagagacaagcagagtgtgctaaaactgcccggatc caaatggccctccctacaggcaaatcagtgggcgccgccaccaacaacctttacgaagag cttggggacagtgccatgcgtgggtacggacatcatgagcaacaacagttgcttaggccc tctcttctgagaccagaggagctctccatggagtctggcatcgacccaggccaggactat tacacccaggattattataattatgaccacgggtatgaactgcctcagtatggcagtcgc aggaagttgatatctccgacaggcctgtatgatgagtacggagaggtgatcgttgacgac gatgggagctattactacagcccgcaggagtcggagggagagtacgggaggaagaagcgg attaagctggtggtggacagggagtatgagactagttccacgggggaggacagcgctccg gagccccaaagaaaccgtctgtctaacctgaccaaccacagcaacatcaatggcagcgtg tacctggcgcagaacggctcggtcatacgcacccgccggtgtgtccactcaaacaacatc aaggtcaactccccagtgcggctgggcaagcactttaagaaactggacaaactggccgtg actcacgaggagagactgcccctcaacagccccgtggcgaccacatcctcggtcgacaag accctcaacacccagccctccagcggctccctggcctccagcaccagtggcccagagagc atagcgtcaaagtccaacatcgccaaggccaggagcgagagaagccggaacgctgaggag caggaatcaccagtggacaatgaggaagtgagagaacctttagaatctcagagcgatcgc acacagtccgatgaggaggagctatggatggggccttggaacaatctgcacataccaatg acaaaactgtga

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