Oncorhynchus kisutch (coho salmon): 109870955
Help
Entry
109870955 CDS
T09179
Name
(RefSeq) sodium channel protein type 2 subunit alpha
KO
K04834
voltage-gated sodium channel type II alpha
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109870955
Ion channels [BR:
oki04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
109870955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
PFF1_TM
ATP-synt_B
IQ
Zip
FraC
Motif
Other DBs
NCBI-GeneID:
109870955
NCBI-ProteinID:
XP_020317263
Ensembl:
ENSOKIG00005031301
LinkDB
All DBs
Position
LG26:13016786..13065854
Genome browser
AA seq
2001 aa
AA seq
DB search
MAQLLVPPGPDSFRLFCRESLDAIERRIAEENAKKPKGKPNDDGDNGPKPSSDLEAGKSL
PLIYGDIPKGLVSTPLEDLDTFYSNQKTFIVLNRGKAIFRFNATPALYVLSPFNPLRRIS
IKVLVHSLFSMVIMFTILTNCAFMTLSQPPDWAKNIEYTFTGIYTFESLIKILARGFCVG
KFTFLRDPWNWLDFCVIVMAYVTSFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALI
QSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRNKCLRIRPNSTNLLNDTLDFNGKEYND
GDFNETVPFNWTNYTNNPDNYYYLPGKRDALLCGNGSGAGLCPEGFWCVKAGRNPDFGYT
SFDTFSWAFLSLFRLMTQDYWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLINLILAVVA
MAYDEQNQATMEEAQKKEEEFQAMLEQLRRQQEDAQAAATVMAAESGEFSERGDLTESSS
EASKLSSKSAKERRNRRKKRKQREEEREDNDKCHRSESESSMKKSHFRFSMDASNLHNYD
MSCSTPYQSFLSIRGPLFSSRRNSRASLYSFRDRARDIGSENDFADDENSTFEDNDSRRG
SLFVPRRSNRRSSNVSQNSTPSHVVPSANGKMHSSVDCNGVVSLVGGASLPKSPEGLLLP
EVTVDKASTGDNENSTETEYRKARYGSYQASMDFLEDPVARQRALSVASVITNTMEELEE
SRQKCPPCWYKFANTFLIWDCCPKWLRIKKIVKMIVMDPFVDLAITICIVMNTVFMAMEH
YQMSGEFNTMLYVGNLVFTGIFTAEMCFKIIALDPYIYFQEGWNIFDGIIVSLSLMELGL
ANVSGMSVLRSFRLLRVFKLAKSWPTLNKLIKIIGNSVGALGNLTLVLAIIVFIFAVVGM
QLFGKSYRDCVCKISTDCTLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCL
IVFLMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDSEMNNLTVAIDRIHQGVAFVKAL
VRRSFQSICLRKKKRSLNEDTTLDDLHKTMGTNWNSNHTTVEIMKDPDYIKDGNGATSGL
GVGVCSNAAGKYIMNDNTDYMPFLHNASLTVTVPIAVGESDLNTEDFSSDSSDIEESKEQ
LSEDHPLSSSEGSTVDIRPPGEGEGSVGMEPEESMEPEGCFTDGCVRRFQCCQVNDDEAK
WKMWWTLRKTCFRIVEHNWFESFIIFMILLSSGALAFEDIYIEKRKTIKTVLEFADKVFT
HIFILEMLLKWVAYGFAKYFTNAWCWLDFLIVDVSLVSLVANALGYAELSAIKSLRTLRA
LRPLRALSRFEGMRVVVNALLGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKYYHCVNIT
TQERFKVRDVANKTECLALEGAYWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDS
RNLEDQPDYEVNLYMYMYFVVFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQ
KKYYNAMKKLGSKKPQKPIPRPANKFQGYVFDFITKQAFDIVIMILICLNMVTMMVETDD
QTDNMDGILYKINLVFIVMFTGECILKMFSLRQYYFTIGWNVFDFIVVILSIIGMFLSEL
IEKYFVSPTLFRVIRLARIGRILRLIKSAKGIRTLLFALMMSLPALFNIGLLLFLVMFIY
AIFGMSNFAYVRKESGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNKREPDCDSR
KEHPGSKYKGGDCGNPPVAIIFFVSYIIICFLIVVNMYIAVILENFSVATEESAEPLSED
DFEMFYEVWEKFDARATQFMEYEKLSDFADALDPPLRISKPNKIQLIYMDLPMVSGERIH
CLDILFAFTKRVLGEGEGLDILRGQMEERFMASNPSKVSYEPITTTLRRKQEDMSALIIQ
RAFRRYLLKRIVKRASAMYKEKMLLDKEVLVIDKFNEISTSDRTDMTYSTGSPPSYDSVT
KPEKNKYEKVKREKEVKKKKK
NT seq
6006 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtacctccaggaccagacagcttccggctgttttgtcgtgagtcc
cttgatgccattgagaggcggatcgctgaggagaacgccaagaaacccaaggggaagccc
aatgacgatggcgacaacggacccaagcccagcagtgacctggaggcaggcaaatcactg
ccactcatatacggggacattcccaaaggattggtgtccacaccactggaggacctggac
accttctacagcaaccagaaaacctttatagtattgaaccgagggaaggccatcttccgc
ttcaacgccactcctgccttgtatgtcttaagccccttcaaccctcttagaagaatatca
attaaggttttggttcactcattgttcagcatggtaatcatgttcaccatccttaccaac
tgtgcgtttatgaccctgagtcagcccccggactgggcaaagaatatagagtacacattc
actggaatttatacatttgagtctcttataaaaatattggcaaggggcttctgtgtcggg
aagttcacctttctacgagatccatggaactggttggatttctgtgtcattgtcatggca
tatgtcacatcgtttgtggacctgggcaacgtgtcagcactgagaacgttcagggttctc
cgagcactgaaaacgatatcggtcatcccaggcctcaagaccattgtgggagcgctgatc
cagtcagtgaagaaactgtcagacgtgatgatcctcactgtattctgcctaagtgtcttt
gccctagtagggctgcagctgtttatgggcaatttaagaaacaaatgtttaaggatccgt
cctaactcaaccaacctcttgaatgatacattggactttaatgggaaggagtataatgat
ggggactttaacgagaccgtcccgttcaactggaccaattacactaataatcctgataat
tattactacctcccaggtaaaagggatgctttgctttgtggaaatggcagtggtgctggg
ctgtgtccagagggattctggtgcgtcaaagcgggccggaacccagacttcggctacacc
agctttgacacgttcagctgggccttcctgtctctgttcagactgatgactcaggactac
tgggagaacctctaccagcagaccctgcgggctgctgggaagccgtatatgatcttcttt
gtgctggtcatcttcctgggctccttctacctgatcaacctgatcctggctgtggttgcc
atggcgtacgacgagcagaaccaggccaccatggaagaggctcagaagaaggaggaggag
ttccaggccatgctggagcagctgagaagacagcaggaggatgcacaggcggcggcaacg
gtgatggcggctgagagtggggagttcagtgagagaggggacctcactgagtcctcctca
gaggcctccaaactcagctccaagagcgccaaagagaggcgcaacaggcgcaagaagagg
aagcagagggaggaggagagagaggacaatgacaagtgtcacaggtctgagtccgaaagc
agtatgaaaaagagtcacttccgcttctccatggatgcctctaacctgcacaactatgac
atgagctgttcaacaccataccagtccttcctgagtatccgcggacccctgttctcgtcc
agacggaacagccgggctagcctctacagcttccgggaccgtgcgcgggacataggctcg
gagaacgactttgcagacgatgagaacagcactttcgaggacaacgacagtcgccggggc
tctctgtttgtccctcggcggagcaaccggcgctccagcaacgtgagccagaacagcacg
ccatcacacgtcgtgccttcagcaaatgggaagatgcacagctccgtcgactgcaacggg
gtggtgtccctagtgggcggggcttcactccccaagtcacctgagggactccttctgcca
gaggtgacagtagataaggcctctactggtgacaatgaaaactctacggagacagagtat
agaaaggcccgatatggatcgtaccaggcctctatggacttcctggaagacccagttgcc
aggcagagggcgctcagtgtagctagtgttataaccaacactatggaagaacttgaagaa
tcgagacagaagtgccctccttgctggtacaagtttgccaacaccttcctcatctgggac
tgttgtccgaagtggctgaggatcaagaaaatagtcaagatgatcgtgatggacccgttt
gtagacctagctatcaccatatgtattgtcatgaacacagtgttcatggctatggagcat
taccaaatgtctggggagttcaacaccatgctttatgtgggaaacctggtgttcacgggt
atcttcacagctgagatgtgtttcaagattattgctttggatccgtacatttattttcag
gaaggctggaatatatttgatggtatcattgtcagtttgagcttgatggagcttggcttg
gccaacgtgtctggaatgtctgtcctcagatcattccgattgctgagagtattcaaactg
gccaagtcttggcccacactgaacaagctgatcaagatcattggtaactcagtgggggcc
ttgggtaatctcaccctcgtactggccatcattgtcttcatcttcgccgtggtgggcatg
cagctttttgggaagagctacagagactgtgtgtgtaagatctctacagactgcacactg
ccccggtggcacatgcatgacttcttccactccttcctgattgtgttccgggtgctgtgt
ggggagtggatcgagaccatgtgggactgtatggaggtggctggtcagagcatgtgtctc
atcgtcttcctgatggtcatggtcatcgggaacctagtggtcctgaatctgttcctggcc
ttgctgctgagctcgttcagtgctgataacctggcggccacggatgatgacagcgagatg
aacaatctgacggtggccatagaccgcatccaccagggcgtcgccttcgtcaaggccttg
gtgcgccgctctttccaaagcatctgtctgaggaagaagaagaggagcctgaacgaggac
acgaccctggatgacctccacaaaaccatggggaccaactggaactccaaccacaccact
gtggagatcatgaaagaccccgattacataaaggatggcaatggcgccaccagtgggttg
ggagtgggggtgtgcagcaatgcagcagggaagtacataatgaatgacaacactgactat
atgccgttcctccacaacgccagcctgaccgtcacagtgcccatcgctgtgggagagtcg
gacctcaacactgaggacttcagcagcgattcctctgacatagaggaaagcaaagagcag
ctatctgaagaccatccgctgagctcctcagagggcagtacagtggacattaggccccca
ggagagggagagggctcggtgggaatggagcctgaggagtccatggaacctgaaggctgc
ttcactgatggatgtgtccgcagattccaatgctgccaagtgaacgatgatgaggccaag
tggaagatgtggtggacgttgagaaaaacttgtttcaggatagtggagcacaactggttt
gagagctttatcatcttcatgatcctgctcagcagtggagcgctggcatttgaggacatc
tacatcgagaagaggaagaccattaagacggtgttagagtttgcagacaaagtcttcacc
cacatcttcatcctggagatgttgctgaagtgggtggcctatggattcgccaaatacttc
accaacgcttggtgctggctggacttcctcattgtcgacgtgtctcttgtcagtcttgtg
gccaacgccctgggctacgctgagctgagtgccatcaagtccctgaggactctacgagca
ctgaggcccctgagagcgctgtcccgcttcgagggcatgagggtggtggtcaacgctctg
ctcggagccatcccctccatcttcaatgtgctgctggtctgcctcatcttctggctcatc
ttcagcatcatgggcgttaacctgtttgcagggaaatactaccattgtgtcaacatcacc
acgcaggagcgtttcaaagttagagatgtagctaacaagacagaatgtttggctttggaa
ggtgcctactggaagaatgtcaagatcaactttgataacgtgggagcgggctatctggca
ctgttacaagtggctacattcaaaggctggatggacatcatgtatgcagctgtggactct
cgcaatttggaagatcaacccgactatgaagttaatctgtacatgtatatgtactttgtg
gtattcatcatatttggatccttctttacactcaacctcttcattggtgtcattatagac
aacttcaatcagcaaaagaaaaagtttggaggtcaagacatcttcatgacagaggaacag
aagaaatactacaatgctatgaagaagcttggctcaaagaaaccccaaaagcctatccca
aggccagcgaacaagtttcaaggatatgtctttgatttcattacaaagcaagccttcgac
attgtcatcatgattctcatatgccttaatatggtcaccatgatggtggagacggacgac
cagacggacaacatggatggaattctctataagatcaacctggtgtttattgtcatgttt
accggagagtgtattctgaagatgttctcactccgccaatactacttcaccattgggtgg
aatgtatttgactttattgttgttatcctgtcgataattggtatgtttctgtctgaactg
atagagaagtactttgtttcaccaaccttattccgagtcattcgactggcccggattggt
cgcatccttcgcctcatcaagagtgccaagggaatccgtacactcttgtttgctttgatg
atgtcacttcctgccttgttcaatattggtctcctgctcttcttagtgatgtttatctat
gccatctttggcatgtcaaactttgcatacgtcaggaaggagtctgggattgatgacatg
ttcaactttgagacatttggcaacagcatgatttgcctgttccagatcaccacgtcagct
ggctgggacggcctgctggcacccatcctaaacaagagagagccagactgtgacagccgt
aaagagcacccaggcagcaagtacaaggggggagactgtgggaatccccctgtagccatt
atcttctttgtgagctacatcataatctgttttctcattgtggtcaacatgtacattgct
gtcatcctggagaacttcagtgtggccactgaggagagcgctgagcccctgagcgaggat
gactttgagatgttctacgaggtctgggagaagtttgatgcaagggccacccagttcatg
gagtatgagaagctgtccgacttcgctgatgccttggaccccccgctacgcatttctaag
cccaacaagatccagttgatctacatggatttgcccatggtgagtggggagcgcatccac
tgcctggacatcctgtttgccttcaccaagcgcgtcctgggtgagggcgaaggcttggac
atcctccgtggtcaaatggaggagcgctttatggcctccaacccctccaaggtgtcctac
gaacccatcaccaccacgctacgccgtaaacaagaagacatgtctgccctgataattcag
agagctttcagacgatatctgctcaaacgtattgttaaacgggcctctgccatgtacaaa
gagaagatgctccttgataaagaagttctcgtcatagacaaatttaacgagatctctact
tcagacagaactgacatgacatactccacaggctctcccccatcatatgacagtgtcaca
aaaccagagaaaaacaaatatgaaaaagtcaagagagagaaggaggtgaagaagaaaaag
aagtga
DBGET
integrated database retrieval system
