Oncorhynchus kisutch (coho salmon): 109871569
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Entry
109871569 CDS
T09179
Name
(RefSeq) cadherin-12
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109871569
Cell adhesion molecules [BR:
oki04515
]
Cadherins
Major cadherins
109871569
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_4
Cadherin_CELSR2_9th
Phage_holin_3_6
Stevor
Motif
Other DBs
NCBI-GeneID:
109871569
NCBI-ProteinID:
XP_020318055
Ensembl:
ENSOKIG00005026630
LinkDB
All DBs
Position
LG27:complement(21270459..21302174)
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AA seq
808 aa
AA seq
DB search
MITRNGLLLVFWFLLDKGFLAPLHSPPQSRMGREHHLRGMAGLGLRRHGASGVQRVKRGW
VWNQFFVLEEYVGSEPQYVGKLHTDLDRDDSEVKYTLSGEGAGTIFTIDQTTGDIHALMG
LDREEKSYYTLRAQAVDMHTGRPLEPESEFIIKVQDINDNEPKFLEGPYTASVPEMSPGG
TFVMQVTATDTDDPTYGNSARIVYSILHGQPYFSVDSKTGVIRTALPNMDREMKELYQVL
IQAKDMGGQLGGLAGTTTINVTLSDVNDNPPRFSKSILHLRVPESSSVGSAVGKVRAHDL
DSGKNAEVEYSIVPGDEGNMFDITYNGHSQEGIIVLRKHLDYENKRSYTFKVEASNAHLD
PRFLHLGPFKDTTTVKVNVLDVNEPPVFTKTSYTIDVYEDTPVGTIIGSVTAQDLDASSS
AVRYSIEWKRPVDSCFDIDTVEGTISTNEMLDRESNRQHNISVVASKVNNPLLSNKVTVT
VNVLDVNEFPPELAVPFDTFVCENAEVGQVIQTISATDKDLPAVGQRFFFKSPREIRNRN
FTVRDFGNNTAGIVTKRVGFQRRVQEYYVIPVVVEDNGYPAQSSTGTLTVRVCACVTEGS
LLSCTAEAVFLPMGLSTWAVMAILLCMIILLAIFALYVGLRRQKKRETLMSSKEDIRDNV
IHYDDEGGGEEDTHAFDMGTLRNTKAIKEKMLRRGTGSEVTAQTEINESTPTTEGSADII
RDYIHQRLQENHLGFSAPPYDSLVTYAYEGDGSVGESLSSIESWMADGGEDFKYLSEWGP
PFKTVAGILDKDKTDPPVAEVEESRAYL
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgatcacaaggaacggtctcctgctggtcttttggtttctcttggacaaaggcttcctg
gctccccttcactctccaccccaaagcaggatgggaagagagcaccacctgaggggcatg
gcaggactgggactgaggagacatggggcgtcaggggttcagagggtaaagcgaggatgg
gtgtggaaccagttctttgtactggaggaatatgtgggatctgaaccacagtacgttgga
aagcttcacacagacctggacagggatgacagtgaggtgaagtacactctctcaggagaa
ggagcaggcaccatcttcaccatagaccagacgacgggcgacatccatgccttgatgggt
ttggacagagaggagaagtcttactacacattacgagctcaggctgtggacatgcacaca
ggcaggcctctggagcctgagtctgaattcatcataaaagttcaagacataaatgacaat
gaaccaaagtttttagagggtccatatacagccagtgtcccagagatgtcaccaggaggt
acttttgttatgcaggtgactgccacagatactgacgaccccacctatgggaatagtgca
cggatcgtgtacagtatcctacatggacagccttacttttcagtcgactccaaaactggg
gtgataaggactgctttacccaacatggaccgtgaaatgaaggagctgtaccaggtcctt
attcaggccaaggatatgggcgggcagctggggggactagccggaacaaccaccatcaac
gtcaccctcagcgacgtcaacgacaacccccccaggttttcaaaaagtattcttcacctc
agggtcccagaatcatcgtctgtgggctcagcagtagggaaggtcagagctcatgacctg
gactctgggaagaatgcagaggtggaatattctatagttcctggtgatgaaggcaacatg
tttgacatcacctacaacgggcacagtcaggagggaatcatagtccttagaaaacatctc
gactacgaaaacaaaaggtcgtacacctttaaagtggaggcctccaatgctcacctggac
ccccggttcctccacctgggccctttcaaagacaccaccacagtcaaggtcaatgtgctg
gatgtgaacgagccccctgtgttcactaagacctcttacaccatagatgtgtatgaggat
actcctgtgggcacaattattggatcagttactgcacaggacctagacgcaagcagcagt
gcagttaggtactctattgagtggaagaggcctgtggacagctgctttgacattgatact
gtggaagggaccatctccaccaacgagatgttggacagagagagtaataggcagcacaat
atctctgtagtggccagtaaagttaacaaccctctcctatccaacaaggtcacagtcaca
gtcaatgtgctggatgtcaacgagttccctccggagcttgccgttccctttgacactttt
gtctgtgaaaatgcagaagtaggccaggtaattcagaccatcagtgctacggacaaggat
cttcctgctgttggacagaggttcttcttcaagtcccctagggaaatcagaaacaggaat
ttcaccgtgcgagactttggaaacaacacggcggggatagtgaccaagcgtgtagggttc
cagaggcgggtccaggagtactacgtgatacctgtggtggtggaggacaatgggtatcca
gcccagagcagcaccggcactctcactgtccgagtgtgtgcctgtgtgactgaagggtca
ctcctgtcctgcacggcagaggcagtcttcctaccaatgggcctcagcacctgggcagtg
atggccattttactgtgcatgatcatactcctggcgatctttgcactctatgtcggcctg
agacggcagaagaagagggagacgttgatgtcatccaaggaggacatccgggacaacgtg
atccactacgatgatgaggggggcggcgaggaggacacccacgccttcgacatgggcact
ctgaggaacaccaaagccatcaaggaaaaaatgctccgcaggggcacagggtcagaggtc
accgcccaaactgagatcaatgagtcaacccccaccacagagggcagcgcagacatcatc
agggactacatccaccagcgtctccaggagaaccacctgggtttctctgccccgccgtat
gactcactggtcacgtatgcctacgagggggatgggtcggtgggcgagtcgctaagctcc
atcgagtcgtggatggcagacggaggagaagacttcaaatacctcagcgagtgggggcca
ccctttaaaactgtagcagggatattagacaaagacaaaacagatcctcccgtggcggaa
gtggaggagagccgagcgtacttgtga
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