Oncorhynchus kisutch (coho salmon): 109872779
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Entry
109872779 CDS
T09179
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109872779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109872779
03012 Translation factors [BR:
oki03012
]
109872779
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
109872779
Translation factors [BR:
oki03012
]
Eukaryotic type
Release factors
109872779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
109872779
NCBI-ProteinID:
XP_020319695
Ensembl:
ENSOKIG00005034172
UniProt:
A0A8C7IYY4
LinkDB
All DBs
Position
LG28:complement(11171837..11180769)
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AA seq
446 aa
AA seq
DB search
MADDPNAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTDEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVTLFVSNDKVNVAGMVLAGSADFKTELSQSD
MFDPRLQAKILKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDTMRYILRCHGAEGLAMVEKGTDEKTLYLTPEQE
KDKSHFTDKETGQEHELIESMPLLEWFANSYKKFGACLEIVTDKSQEGSQFVKGFGGIGG
ILRYRVDFQAIEYQGEDDELFDLDDY
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaccccaacgcagcagacaggaacgtggagatatggaagataaagaagttg
atcaaaagtctggaagctgctcgggggaatggtacgagtatgatctccttgattatccct
ccaaaggatcagatctccagagtggccaagatgttggctgatgagtttggcactgcatcc
aatattaaaagcagagtcaacaggctctctgtgctcggagccatcacctctgtacagcag
agactcaaactctacaataaagtgcctcccaacggcttggttgtatactgtggcaccatt
gtgacggacgagggcaaagagaaaaaagtcaatattgactttgagccttttaaacccatc
aacacttctctgtatctctgtgacaacaagttccacacagaggctcttacagccttgctg
tcagatgacagcaagtttggttttattgtgattgatggaagtggcgccctcttcggaacc
ctgcagggaaacaccagggaagtgctgcacaagttcactgtggacctacccaagaagcac
ggcagaggagggcagtctgccttgcgttttgctcgtttgaggatggagaagagacacaac
tatgtccgaaaggtggcggagacggcagtcacgctttttgtttccaacgacaaggtcaac
gtagcaggcatggtcttggctggttcagctgacttcaagacggagctcagccagtccgat
atgtttgatccgaggctacaagcaaagatcctgaagctggttgacatatcatatggtggg
gagaatgggttcaaccaggccattgagctgtctgcagaagtgctttccaatgttaaattc
attcaggagaagaaacttataggacgatactttgatgagatcagccaggatacagggaaa
tactgctttggggtggaagacacactgaaagcactggaaatgggtgctgttgagattctg
attgtctacgagaacctggataccatgagatatatcctgagatgccacggagcagaggga
cttgctatggtggagaagggtacagatgagaaaacgttgtatttgacaccagagcaggag
aaagacaagtctcacttcacagacaaagagactgggcaggagcatgagctgatcgagagc
atgccgttacttgaatggttcgccaacagctataagaagtttggagcctgtctggagatt
gtcactgacaagagccaagaaggatcccagtttgtcaagggctttggtggaattggtggg
atcttgcggtacagggtggatttccaggccatagagtaccaaggagaagacgatgagtta
tttgatttggatgactactag
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