KEGG   Oncorhynchus kisutch (coho salmon): 109873307
Entry
109873307         CDS       T09179                                 
Symbol
ubc
Name
(RefSeq) polyubiquitin-C isoform X1
  KO
K08770  ubiquitin C
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03320  PPAR signaling pathway
oki04120  Ubiquitin mediated proteolysis
oki04137  Mitophagy - animal
oki04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    109873307 (ubc)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    109873307 (ubc)
   04137 Mitophagy - animal
    109873307 (ubc)
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    109873307 (ubc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oki04121]
    109873307 (ubc)
Ubiquitin system [BR:oki04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   109873307 (ubc)
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 TBK1_ULD Ubiquitin_5
Other DBs
NCBI-GeneID: 109873307
NCBI-ProteinID: XP_031663368
LinkDB
Position
LG28:22970126..22973363
AA seq 761 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGQ
NT seq 2286 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagaccctcacaggcaagaccatcacccttgaggtggagcccagt
gacaccattgagaatgtgaaggccaagatccaggacaaggagggcatccccccagaccag
cagcgtctgatcttcgctggcaagcagctggaagatggccgcaccctctccgactacaac
atccagaaagagtccactctccaccttgtgctgcgtctcaggggaggcatgcagatcttc
gtcaagaccctcactggtaaaaccatcacactagaagtggagcccagtgacaccattgag
aatgtgaaggccaagatccaggacaaggagggcatccccccagaccagcagcgtctgatc
ttcgctggcaagcagctggaagatggccgcaccctctccgactacaacatccagaaagag
tccactctccaccttgtgctgcgtctcaggggaggcatgcagatcttcgtcaagaccctc
actggtaaaaccatcacactagaagtggagcccagtgacaccattgagaatgtgaaggcc
aagatccaggacaaggagggcatccccccagaccagcagcgtctgatcttcgctggcaag
cagctggaagatggccgcaccctctccgactacaacatccagaaagagtccactctccac
cttgtgctgcgtctcaggggaggcatgcagatcttcgtcaagaccctcactggtaaaacc
atcacactagaagtggagcccagtgacaccattgagaatgtgaaggccaagatccaggac
aaggagggcatccccccagaccagcagcgtctgatcttcgctggcaagcagctggaagat
ggccgcaccctctccgactacaacatccagaaagagtccactctccaccttgtgctgcgt
ctcaggggaggcatgcagatcttcgtcaagaccctcactggtaaaaccatcacactagaa
gtggagcccagtgacaccattgagaatgtgaaggccaagatccaggacaaggagggcatc
cccccagaccagcagcgtctgatcttcgctggcaagcagctggaagatggccgcaccctc
tccgactacaacatccagaaagagtccactctccaccttgtgctgcgtctcaggggaggc
atgcagatcttcgtcaagaccctcactggtaaaaccatcacactagaagtggagcccagt
gacaccattgagaatgtgaaggccaagatccaggacaaggagggcatccccccagaccag
cagcgtctgatcttcgctggcaagcagctggaagatggccgcaccctctccgactacaac
atccagaaagagtccactctccaccttgtgctgcgtctcaggggaggcatgcagatcttc
gtcaagaccctcactggtaaaaccatcacactagaagtggagcccagtgacaccattgag
aatgtgaaggccaagatccaggacaaggagggcatccccccagaccagcagcgtctgatc
ttcgctggcaagcagctggaagatggccgcaccctctccgactacaacatccagaaagag
tccactctccaccttgtgctgcgtctcaggggaggcatgcagatcttcgtcaagaccctc
actggtaaaaccatcacactagaagtggagcccagtgacaccattgagaatgtgaaggcc
aagatccaggacaaggagggcatccccccagaccagcagcgtctgatcttcgctggcaag
cagctggaagatggccgcaccctctccgactacaacatccagaaagagtccactctccac
cttgtgctgcgtctcaggggaggcatgcagatcttcgtcaagaccctcactggtaaaacc
atcacactagaagtggagcccagtgacaccattgagaatgtgaaggccaagatccaggac
aaggagggcatccccccagaccagcagcgtctgatcttcgctggcaagcagctggaagat
ggccgcaccctctccgactacaacatccagaaagagtccactctccaccttgtgctgcgt
ctcaggggaggcatgcagatcttcgtcaagaccctcactggtaaaaccatcacactagaa
gtggagcccagtgacaccattgagaatgtgaaggccaagatccaggacaaggagggcatc
cccccagaccagcagcgtctgatcttcgctggcaagcagctggaagatggccgcaccctc
tccgactacaacatccagaaagagtccactctccaccttgtgctgcgtctcaggggagga
cagtaa

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