Oncorhynchus kisutch (coho salmon): 109873307
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Entry
109873307 CDS
T09179
Symbol
ubc
Name
(RefSeq) polyubiquitin-C isoform X1
KO
K08770
ubiquitin C
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03320
PPAR signaling pathway
oki04120
Ubiquitin mediated proteolysis
oki04137
Mitophagy - animal
oki04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109873307 (ubc)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109873307 (ubc)
04137 Mitophagy - animal
109873307 (ubc)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
109873307 (ubc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109873307 (ubc)
Ubiquitin system [BR:
oki04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
109873307 (ubc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
109873307
NCBI-ProteinID:
XP_031663368
LinkDB
All DBs
Position
LG28:22970126..22973363
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AA seq
761 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGQ
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaagaccctcacaggcaagaccatcacccttgaggtggagcccagt
gacaccattgagaatgtgaaggccaagatccaggacaaggagggcatccccccagaccag
cagcgtctgatcttcgctggcaagcagctggaagatggccgcaccctctccgactacaac
atccagaaagagtccactctccaccttgtgctgcgtctcaggggaggcatgcagatcttc
gtcaagaccctcactggtaaaaccatcacactagaagtggagcccagtgacaccattgag
aatgtgaaggccaagatccaggacaaggagggcatccccccagaccagcagcgtctgatc
ttcgctggcaagcagctggaagatggccgcaccctctccgactacaacatccagaaagag
tccactctccaccttgtgctgcgtctcaggggaggcatgcagatcttcgtcaagaccctc
actggtaaaaccatcacactagaagtggagcccagtgacaccattgagaatgtgaaggcc
aagatccaggacaaggagggcatccccccagaccagcagcgtctgatcttcgctggcaag
cagctggaagatggccgcaccctctccgactacaacatccagaaagagtccactctccac
cttgtgctgcgtctcaggggaggcatgcagatcttcgtcaagaccctcactggtaaaacc
atcacactagaagtggagcccagtgacaccattgagaatgtgaaggccaagatccaggac
aaggagggcatccccccagaccagcagcgtctgatcttcgctggcaagcagctggaagat
ggccgcaccctctccgactacaacatccagaaagagtccactctccaccttgtgctgcgt
ctcaggggaggcatgcagatcttcgtcaagaccctcactggtaaaaccatcacactagaa
gtggagcccagtgacaccattgagaatgtgaaggccaagatccaggacaaggagggcatc
cccccagaccagcagcgtctgatcttcgctggcaagcagctggaagatggccgcaccctc
tccgactacaacatccagaaagagtccactctccaccttgtgctgcgtctcaggggaggc
atgcagatcttcgtcaagaccctcactggtaaaaccatcacactagaagtggagcccagt
gacaccattgagaatgtgaaggccaagatccaggacaaggagggcatccccccagaccag
cagcgtctgatcttcgctggcaagcagctggaagatggccgcaccctctccgactacaac
atccagaaagagtccactctccaccttgtgctgcgtctcaggggaggcatgcagatcttc
gtcaagaccctcactggtaaaaccatcacactagaagtggagcccagtgacaccattgag
aatgtgaaggccaagatccaggacaaggagggcatccccccagaccagcagcgtctgatc
ttcgctggcaagcagctggaagatggccgcaccctctccgactacaacatccagaaagag
tccactctccaccttgtgctgcgtctcaggggaggcatgcagatcttcgtcaagaccctc
actggtaaaaccatcacactagaagtggagcccagtgacaccattgagaatgtgaaggcc
aagatccaggacaaggagggcatccccccagaccagcagcgtctgatcttcgctggcaag
cagctggaagatggccgcaccctctccgactacaacatccagaaagagtccactctccac
cttgtgctgcgtctcaggggaggcatgcagatcttcgtcaagaccctcactggtaaaacc
atcacactagaagtggagcccagtgacaccattgagaatgtgaaggccaagatccaggac
aaggagggcatccccccagaccagcagcgtctgatcttcgctggcaagcagctggaagat
ggccgcaccctctccgactacaacatccagaaagagtccactctccaccttgtgctgcgt
ctcaggggaggcatgcagatcttcgtcaagaccctcactggtaaaaccatcacactagaa
gtggagcccagtgacaccattgagaatgtgaaggccaagatccaggacaaggagggcatc
cccccagaccagcagcgtctgatcttcgctggcaagcagctggaagatggccgcaccctc
tccgactacaacatccagaaagagtccactctccaccttgtgctgcgtctcaggggagga
cagtaa
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