Oncorhynchus kisutch (coho salmon): 109888821
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Entry
109888821 CDS
T09179
Name
(RefSeq) sodium/calcium exchanger 1-like isoform X1
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04020
Calcium signaling pathway
oki04260
Cardiac muscle contraction
oki04261
Adrenergic signaling in cardiomyocytes
oki04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
109888821
04020 Calcium signaling pathway
109888821
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
109888821
04261 Adrenergic signaling in cardiomyocytes
109888821
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oki02000
]
109888821
00536 Glycosaminoglycan binding proteins [BR:
oki00536
]
109888821
Transporters [BR:
oki02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
109888821
Glycosaminoglycan binding proteins [BR:
oki00536
]
Heparan sulfate / Heparin
Others
109888821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
CFSR
Flu_M2
Motif
Other DBs
NCBI-GeneID:
109888821
NCBI-ProteinID:
XP_031679589
Ensembl:
ENSOKIG00005023829
LinkDB
All DBs
Position
LG4:complement(78573263..78772962)
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AA seq
946 aa
AA seq
DB search
MGHFQLSPMLSLGLRLVVVVAIMFLKFQHVTAMSSDVDLDQFVSPTASGNVTVCTTAGTA
CEKGVILPIWEPQNPSFGDKVARATVYFVALVYMFLGVSIIADRFMASIEVITSQEKEIT
IKRPNGETTTTTVRIWNETVSNLTLMALGSSAPEILLSVIEVCGHGFDAGALGPSTIVGS
AAFNMFVIIGICVYVVPDGEVRKVKHLRVFFVTATWSIFAYIWLYLILAVISPGIVQVWE
GLLTLFFFPICVLFAWVADRRLLFYKYVYKRYRTGKQRGMIIETEGDRPLPSKVDIEMDG
KMLNSHAVDFLDGPLGLELNMKDLDEEETRRDMAKILKELKQKHPDKEMEQLIELANYQV
LSSQQKSRAFYRCQATRLMTGAGNILKKHAADQARKAVSLHEVRSDVADNDPISKIYFDP
GSYQCLENCGTVAVNVLRRGGDLTKTVSVEFRTEDGSANAGSDYEFTEGVVVFKPGETQK
EIRVGIIDDDIFEEDENFLIHLSNVKVLLAEGEEVENPETNHVEAVACLGLPATATVTIF
DDDHAGIFTFEEPVAHVSESVGTMEVKVLRTSGARGVVMVPYKTVEGTARGGGEDFEDTH
GVLEFQNDEIFKMIKVRIVDDEEYEKNKTFYLEMGEPRLMETDDSKATEVAVKEVEEETP
LTEVHDEDQRIADMGRPTLGDHVKLEIIIEESYEFKNTVDKLIKKTNLALLVGTNSWRDQ
FIEAITVSAGEDDEDEECGEEKLPSCFDYVMHFLTVFWKVLFAFVPPTDYWNGWACFVVS
ICMIGLLTAFIGDLASHFGCTVGLKDSVTAVVFVALGTSVPDTFASKVAAIQDQYADASI
GNVTGSNAVNVFLGIGVAWSIAAIYHNSKGNDFKVDPGSLAFSVTLFTIFAFICVGVLMY
RRRPSIGGELGGPRTPKILTTMLFVSLWLLYILFSSLEVYCHFKAF
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgggacactttcagctctcccccatgctctcccttggccttcggcttgtggttgtcgta
gcaatcatgtttctcaaattccaacatgtgacggctatgtcctcggacgtggacttggat
cagtttgtgtctccaactgccagcggcaatgttactgtgtgcaccacagcaggcacagca
tgcgaaaaaggggtgattctgcctatctgggaacctcagaatccctcgtttggggacaaa
gtggcacgggcaacagtctatttcgtggccctggtgtacatgttccttggagtgtccatc
atcgctgaccgtttcatggcgtccatcgaggtcatcacctctcaggagaaagagatcact
attaagagacccaacggagagaccaccaccaccaccgtgcggatctggaatgagacagtg
tccaacctcacgctcatggccctgggttcaagtgcccctgagatcctactgtccgtcatt
gaggtttgcggccacggttttgatgcaggagccttgggtccaagcaccatcgtgggcagc
gccgccttcaacatgtttgtcatcattggcatctgtgtgtacgtggtgcccgacggggag
gtccgtaaggtcaagcacctgcgcgtcttcttcgtgacagccacctggagcatcttcgcc
tatatctggctctacctgatcctggctgtcatctcccccggcatagtgcaggtatgggag
ggcctgctcaccctcttcttctttcccatctgcgtgttgttcgcctgggtcgctgaccga
cgcctcctcttctacaagtacgtctacaagcgctaccgtaccggcaagcagcggggcatg
atcattgaaaccgagggtgaccgcccgctcccgtccaaagtcgacattgagatggacgga
aagatgctcaactctcatgcggtggacttcctggacgggcctctggggctggagctgaac
atgaaggacctcgatgaggaggagacccggcgcgacatggccaagatcctcaaggagctg
aagcagaagcacccagacaaggagatggagcagctgattgaactggccaactaccaggtg
ttgagttcacagcagaagagcagggccttctaccgctgccaggccaccaggctcatgacc
ggtgctggaaacatcctgaagaagcatgcggccgaccaggcccgcaaggccgtcagcttg
cacgaggttcgctctgatgtggccgataacgaccccatttccaagatatactttgacccc
ggctcctatcagtgcctggagaactgcggcacagtggcagttaacgtgctacggcgaggc
ggtgacctgaccaagacagtgtcggtggagttccgtacggaagatggatcagccaacgcg
ggctcggactacgagttcaccgagggggtggtggtgttcaagcccggcgagacccagaag
gagatccgtgtgggcatcattgatgatgacatctttgaggaggatgagaacttcctgatc
cacctgagcaacgtcaaagtgctgctggcagagggagaggaggtagagaacccagagacc
aatcacgtggaagcggtggcctgtctcggcctgcctgccacggcaaccgtgaccattttt
gacgacgaccacgccggcatcttcacgttcgaggagccggttgcacacgtgagtgagagc
gtgggtaccatggaggtgaaggtgctgcgtacgtcaggggcacgtggggtcgtcatggtg
ccctacaagactgtggagggcacggcacgtggaggaggagaggatttcgaagatacccac
ggggtcctggagttccagaacgatgaaatcttcaaaatgatcaaggtcagaatcgttgac
gacgaggagtatgagaaaaacaagaccttctacttggagatgggagagcctcgcctgatg
gagaccgatgacagtaaagctacagaggtggctgtgaaggaggtggaagaggagacgcca
ctgacagaagtgcatgatgaggaccaacgcatcgctgatatgggccgacccacgctgggg
gaccacgtcaaacttgaaatcatcattgaggaatcctacgagtttaagaacactgtggac
aagctgattaagaagacaaacctggccctgctggtggggactaacagctggagagaccag
ttcatcgaggccatcactgtcagtgccggtgaggatgacgaggatgaagaatgcggcgag
gagaagctgccgtcctgcttcgactacgtcatgcacttcctcaccgtcttctggaaggtt
ctgtttgcgttcgttcccccaacagactactggaatggctgggcctgcttcgtggtgtcc
atctgcatgatcggcctgcttacagccttcatcggggacctggcctcccacttcggctgc
actgtgggcctcaaggactctgtcactgccgtggtgtttgttgcgctggggacctctgtg
ccagacacctttgccagtaaggtggcagccatccaggaccagtatgctgacgcatccatc
ggcaacgtgacgggcagcaacgcggtcaatgtgttcctgggcattggcgtggcctggtcc
atcgctgccatctaccacaactccaagggcaacgacttcaaggtagacccggggagcctg
gccttctccgtcactctcttcaccatcttcgccttcatctgcgtgggggtgctgatgtac
cggaggcgaccttcgatcggcggcgagctgggaggtccgcggactcccaagatactgacc
accatgctgtttgtcagcctgtggctgctgtacattctgttctcctcgctggaggtctac
tgccacttcaaggccttctaa
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integrated database retrieval system
