Oncorhynchus kisutch (coho salmon): 109890393
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Entry
109890393 CDS
T09179
Name
(RefSeq) transformer-2 protein homolog alpha-like isoform X1
KO
K12897
transformer-2 protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109890393
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oki01009
]
109890393
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109890393
Protein phosphatases and associated proteins [BR:
oki01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109890393
Spliceosome [BR:
oki03041
]
Common components
Common spliceosomal components
SR proteins
109890393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
GRP
Motif
Other DBs
NCBI-GeneID:
109890393
NCBI-ProteinID:
XP_031680129
Ensembl:
ENSOKIG00005029943
LinkDB
All DBs
Position
LG5:6202597..6211284
Genome browser
AA seq
307 aa
AA seq
DB search
MSDNEKDFGERDSRSASRSVSPRGSGKSASRSPAHSPARSKDGSRHSRSKSHSRSRSKSR
SRSHRSSRRHYSRSRSRSHRRRSRSRSRSGEYRRRRSHSHSPMSNRRRHIGNRANPDPNC
CLGVFGLSLYTTERDLRDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFEVREDANEAKER
ANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGGGGGSSSSGGGGGGGGGGGSGGPS
SSSSRRSSKDYDRGGDRGYDRGYDRGYDRYDDRECYRSYRRRSPSPYYSRGAYRSRSRSR
SYSPRHY
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaacgaaaaggattttggcgagcgggattcgcggtccgcttccaggagtgtg
agcccaaggggttctgggaagtctgccagccgttccccagcccattccccagcccgctcc
aaagatggctccagacactccaggtctaagtcccactcccgatcccgctccaagtccagg
tctcgttcccataggagctcccgcaggcattattcccgctctcgctcccgttcccaccgc
cgccgttcccgtagccgttcccgaagcggggaataccgccgtcgtcggagccacagccac
tcccccatgtccaaccgccgcaggcacattggcaaccgggccaacccggacccgaactgc
tgcctgggtgtgtttggtctgagcctgtacaccacagagagagacctgagagatgtgttc
tccaagtacggccccctggctgacgtcagcatcgtctacgaccagcagtcacgacgctcc
cgcggcttcgccttcgtctacttcgaagtccgagaggacgccaatgaggctaaggagaga
gctaacggaatggagttggatggacggaggatcagggtcgatttctccatcactaaacga
ccacacactcccactcctgggatatacatgggacggcccacatatggtggcggcggcggc
agcagcagcagcggaggcggtggaggaggcggtggaggaggaggaagtggcggccccagc
tcaagctcatctcgccgtagctcgaaggattacgatcgcggcggtgaccgtggttacgac
agaggctacgaccgtggctacgatcgctatgacgaccgagagtgctacaggtcctacaga
cgcaggtctccgtccccgtactacagccgaggggcctaccggtctcgctcccgctcgcgg
tcttactccccacgccactactga
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