Oncorhynchus kisutch (coho salmon): 109890590
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Entry
109890590 CDS
T09179
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like
KO
K04834
voltage-gated sodium channel type II alpha
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109890590
Ion channels [BR:
oki04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
109890590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
FixH
Motif
Other DBs
NCBI-GeneID:
109890590
NCBI-ProteinID:
XP_031648372
Ensembl:
ENSOKIG00005028139
LinkDB
All DBs
Position
LG16:44553669..44589437
Genome browser
AA seq
2027 aa
AA seq
DB search
MAQLLVPPGPDSFCRFCPDSLAAIERRIAEEEARKPRVDHCSDSNDDNEPKPNSDMEAGK
SLPFIYGDIPQGFVSTPLEDLDPFYSNQKTFIVLNRGKAIFRFNATPACYILSPFNPLRR
IAIAVLVHSMFSMLIMFTILTNCAFMTLSNPPDWAKNVEYTFTGIYTFESLIKILARGFC
VGKFTFLRDPWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCIRNLANDTTPDDRLNRTLGTPD
LNGTDFNGTDFNITSSINWTEYINNESNYYYLLNRRDALLCGNGSGAGLCPEGFTCIKAG
RNPDYDYTSFDSFGWAFLSLFRLMTQDFWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLV
NLILAVVAMAYDEQNQATIEEAAQKEEEFQAMLEQLKRQQEEALVAAAAATESHGEYSGR
GGPSSEASSGTSKLSSKSAKERMNRQKKRKERGEHKKFHKSESEDSIKRLSFRFSIDANR
LSYEKRCSSPNQSLLSIRGSLFSPRRNSQASLFSFRGRARDVVSDNDFADDEQSTFEDTD
SRRGSLFVPCRVECRSSTVSQTSLAPQRVLLPANGKMHCTVDCNGVVSLVGGTSVPTSPV
GLLLPEGTTTDSEMRLKKRRSRQASMAYLDEPDRARARAMSVASILTNTMEELEESRQKC
PPCWYKFANTYLIWDCCPMWLSFKGIVNTVVMDPFVDLAITVCIVLNTLFMAMEHYPMTT
EFNHVLSVGNLVFTGIFTAEMCFKLIALDPYYYFQQGWNIFDGIIVSLSLMELGLANVEG
LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGK
SYKECVCKIADNCQLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCLIVFMM
VMVIGNLVVLNLFLALLLSSFSADNLAATDDDSEMNNLQIAVGRIQRGVAWVKVAIRQVI
QSLFLGGGATKRVRGESLEGGKTLDELHSSINGKGGNCISKHSLVEITKDPSGVYLKEGN
GRPGGGLGVGLGDSTENYPKEECNYMSFIHNPSLTVSVPIAVCESDFETAITEDFSSDSA
SEEMSMGSKEKLPIEPQQLISSEGSSVDIGPPGDGAESVELEDEESENPENCFTDGCVLR
FQCCQVNVEEGKWKMWWTLRKTCFLIVEHNWFETLIIFMILLSSGALAFEDIYIEQRKTI
KVVLEYADKVFTYIFILEMLLKWVAYGFKKYFTNAWCWLDFLIVDVSLVSLVANALGYSE
LSAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNL
FAGKYYHCVNTTNDETFPIDVVNNKSDCLALANDSARWKNVKINFDNVGAGYLALLQVAT
FKGWMDIMYAAVDSRNVELQPQYEQNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQK
KKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPTNAFQGCVFDFVTKQAFDIVIMIL
ICLNMVTMMVEEDDQTPEREKILHWINFVFIVLFTGECTLKMISLRHYYFTIGWNVFDFV
VVILSIVGMFLSELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPAL
FNIGLLLFLVMFIYAIFGMSNFAYVKHEAGIDDMFNFETFGNSMLCLFQITTSAGWDGLL
APILNKKEPDCDSQMEHPGTLYRGNCGNPPVAMFFFVSYIIICFLIVVNMYIAVILENFS
VATEESAEPLSEDDFEMFYEVWERFDPDATQFVEYDKLSDFADALDPPLRMAKPNHIQLI
KMDLPMVSGERIHCLDILFAFTKRVLGEGEGLDLLRGQMEERFMASNPSKVSYEPITSTL
RRKQEDMSALVIQRSFRRYLARLALKKAAELYKEQPKGSVMYELEDKEVLVIGQFADNST
STEKTDITPTTASLPSYNSATNLEKDQYEKEKREKEKRDIDLREQNK
NT seq
6084 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtaccgcccggacctgacagcttctgccgcttctgtcccgactcg
cttgccgccatcgaaaggcgcattgccgaggaggaggcccggaaaccccgcgttgaccac
tgtagcgacagcaatgacgacaacgagcctaagcccaacagcgacatggaggcagggaag
tctctccccttcatctacggggacatcccccaaggctttgtctccacccctctggaggac
ctggaccccttctactccaaccagaagacatttatagtattaaatcgcggcaaggcaata
ttccgtttcaacgccactcctgcctgttacatcctaagtcccttcaatcctctacggaga
atagcaattgcagttttagtacactcgatgttcagcatgttgatcatgttcaccattctg
accaactgtgcttttatgactctgagcaaccccccggactgggccaagaatgttgagtac
acgttcacagggatttacacattcgagtctctcattaaaatcttggcgagggggttctgt
gtggggaagttcaccttcctcagggatccatggaactggttggacttcatggtcatctcc
atggcatatgtgacagagtttgtggacctgggtaatgtctcggccctcagaaccttcagg
gttctccgagccctcaaaactatatcagtcatcccaggactaaagaccatcgtgggcgct
ctgatccagtcggtcaagaagctctccgacgtcatgatcctcaccgttttctgtctcagc
gtcttcgccctgattggcctccagctcttcatgggcaacctgaggcagaagtgtatccgc
aacctcgccaatgacacgacacccgacgaccgcctgaacagaactctgggaactccagac
ttaaatggaaccgatttcaacggaaccgatttcaacatcactagctccataaactggact
gagtacatcaacaatgagagtaattactattacctcctcaaccgcagggacgccctcctc
tgtgggaatggcagtggagccgggttgtgcccagagggattcacatgcattaaggcgggc
aggaacccagactacgactacacaagcttcgactcgtttggctgggccttcctgtccctg
ttcagactcatgacccaggacttctgggaaaacctctaccaacagaccctgcgagcggcg
gggaagccctacatgatcttctttgtgttggtgatcttcctgggttccttctacctggtc
aacctgatcctggctgtggtggccatggcctacgacgagcagaaccaggccaccatagag
gaggcagcccagaaggaggaggagttccaggccatgctggagcagctcaagagacagcag
gaggaagcattggttgccgcggcagcagccacagagagccacggagagtacagcgggaga
ggggggccctcctcagaagcctcctcagggacctccaaactcagctccaagagtgccaag
gagagaatgaaccgtcagaagaagagaaaagagaggggtgagcacaagaagttccacaag
tccgagtcggaggacagtatcaagaggctaagcttccggttttcgatagatgccaaccgg
ctgtcctacgagaagagatgctcctcacccaaccagtctctcctcagtatccgcggctcc
ctcttctccccgaggaggaacagccaagctagcctgtttagcttccgaggccgcgcccgc
gacgttgtctccgataacgacttcgccgacgacgagcaaagcacgttcgaggacactgac
agccgccgcggctccttgttcgtgccttgccgtgtcgagtgccgctccagcacggtcagt
cagactagcctggcccctcagcgcgtcctgctgcccgccaacggcaagatgcactgcacc
gtggactgtaacggcgtcgtctcgctagtgggagggacctcggtgcccacctcgcctgta
ggactgctcctgcctgaggggacgaccactgactctgagatgaggctgaagaagaggagg
tctcgccaggcttccatggcctacctagatgaaccagacagagccagagccagagctatg
agtgtggccagtattctcaccaacaccatggaggagcttgaagagtccaggcagaagtgt
ccaccatgctggtataagtttgccaacacctatctgatctgggactgctgtcctatgtgg
ttgagtttcaaggggatcgtcaacacggtggtgatggaccccttcgtggacctggccatc
accgtctgcatcgtcctcaacaccctgttcatggccatggaacattatcccatgaccacg
gagttcaatcacgtcctctctgtcgggaacttggtgtttacaggcatcttcacggctgag
atgtgtttcaagctaatcgctctggacccctactactactttcaacagggatggaacata
tttgacggtatcatcgtcagtctgagtctgatggagctcggcctggccaatgtagagggc
ctgtctgtgctccggtctttccgattgttgagggtgttcaaactggccaagtcttggccc
accctgaacatgctgatcaagatcatcggtaactcggtgggagctctgggtaatttgaca
ctggtcctagccatcatcgtgttcatcttcgccgtggtgggcatgcagctgttcggcaag
agctacaaggagtgtgtgtgtaagatcgcagacaactgccagctgccccgctggcacatg
cacgacttcttccactcgttcctcatcgtgttccgggtgctgtgtggggagtggatcgag
accatgtgggactgtatggaggtggctggccagagcatgtgcctcatcgtttttatgatg
gtcatggttatagggaacctggtggttctgaatctgttcctggccctgctgctcagctcc
ttcagcgccgacaacctggcggccacggacgacgacagcgagatgaacaacctgcagatc
gctgtgggccgcattcagaggggcgtggcctgggtcaaggtggccatccgccaggttatc
cagagcctgttcctcgggggcggagccaccaaacgggtcaggggggagtcactggagggg
ggtaagaccctggacgagctccacagctccatcaacggcaaggggggcaactgcatctca
aaacactcgttggtcgagatcactaaagatccgagtggggtctatctgaaggaggggaac
gggcggcccggaggggggttgggggtggggttaggagacagtacggagaattacccgaag
gaggagtgcaactacatgtcgttcatccacaaccccagcctgacagtgagtgtgcccatc
gcggtgtgcgagtcagactttgagaccgctatcacagaggacttcagcagcgactcggcc
tctgaggaaatgtcgatgggcagcaaagagaagctccctatagagccccagcagcttatc
tcgtcggagggcagctcggtggatatcggtcccccgggggatggagctgagtcagtggag
ctggaggacgaggagtcagagaacccagagaactgcttcactgatggctgtgtgctcagg
ttccagtgttgccaggtgaacgttgaggagggcaagtggaagatgtggtggactttgagg
aagacgtgcttcctcatcgtggaacacaactggttcgagaccttaatcattttcatgatc
ctgctcagcagtggcgctctggcgtttgaagacatttacatagagcagaggaagaccatt
aaggtagtgctggagtacgcagacaaagtcttcacttatatcttcatcctggagatgctg
ctgaagtgggtggcctacggattcaagaagtacttcaccaacgcctggtgttggctggac
ttcctcattgttgatgtgtctctggtgagcttagtagccaatgcgttaggctactctgag
ctgagtgccattaaatctctacgaaccctgcgggccttaagacccctgagggccttgtca
cggttcgagggcatgagggtggtggtgaacgccctcctgggtgccattccgtccatcatg
aacgtgctgctggtgtgcctcatcttctggctcatcttcagcatcatgggcgtcaatctg
ttcgcagggaagtactatcactgcgtcaacaccaccaacgacgagacctttcccatcgat
gtggtcaacaacaagagcgactgtctggccctggccaatgacagcgcacgatggaagaat
gtcaagatcaactttgataatgtcggggccgggtacttggccttgttgcaagtggcaacg
tttaaaggttggatggacatcatgtacgcagctgtggactctcgtaatgtggaacttcag
ccccaatatgaacagaacctctacatgtatctgtacttcgtcatcttcatcatctttggc
tccttcttcactctcaacctcttcattggtgtcatcattgacaacttcaaccaacagaag
aaaaagtttggaggtcaggacatcttcatgacagaggaacagaagaagtactacaacgcc
atgaagaagctcggctccaagaagccccagaagccgattcccaggccaacgaatgcattc
caaggctgtgtgtttgacttcgtaacgaagcaggcttttgacattgtcatcatgatcctc
atctgcctcaacatggtcactatgatggtggaagaggatgaccagacaccagagagggaa
aaaatcctccactggattaactttgtctttatagtgctcttcactggggagtgtacgctc
aaaatgatatccctccgccattactacttcaccattggctggaacgtgtttgactttgtc
gttgtcatcctttcaatcgtaggtatgtttttatcagaattgattgagaagtactttgtt
tccccaacgttattccgagtcatccgacttgccagaatcggccgcatcctccgtctcatc
aagggcgccaagggcatccggacgcttttgttcgccttgatgatgtcacttcctgccctg
tttaacattggcctcctgcttttcctggtcatgttcatctacgccatcttcggcatgtcc
aacttcgcctacgtcaagcacgaggcgggaatcgacgacatgttcaacttcgagacgttc
ggcaacagcatgctctgcctgttccagatcaccacgtcggcgggctgggacggcctcctg
gcgcccatcctcaacaagaaggagcccgactgcgacagccagatggagcacccgggcacc
ttgtaccggggaaactgcggcaacccgccagtggccatgttcttcttcgtcagctacatc
atcatctgtttcctcatcgtggtcaacatgtacatcgccgtcatcctggagaacttcagc
gtggccaccgaggagtcggccgagccgctgagcgaggacgactttgagatgttctacgag
gtgtgggagcgcttcgacccggacgccacgcaattcgtggagtacgacaagctgtcggac
tttgcagacgctttggacccaccgctgcgaatggccaagcccaaccacatccagctgatc
aaaatggatctgcccatggtcagcggggagcgcatccactgccttgacatcctgtttgcc
ttcaccaagcgtgtcctgggagagggtgaaggcttggacctcctccggggccagatggag
gagcgcttcatggcctccaacccctccaaagtctcctacgaacccatcaccagtaccctg
cggcgcaagcaggaagacatgtctgccttggtgatccagaggtcattcaggcgctacctg
gcccggctcgccctgaagaaagcagcagagctctacaaggagcagcctaaaggcagcgtg
atgtatgagctggaggacaaggaggtgctggtgataggacagttcgcggacaactccacc
tccacagagaaaacggacattacgcccaccaccgcctcgctgccttcgtacaacagtgcc
acaaacttggaaaaggaccaatatgagaaagaaaagagggagaaagagaagagagacata
gatctgagagagcaaaataaataa
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