Oncorhynchus kisutch (coho salmon): 109894147
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Entry
109894147 CDS
T09179
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109894147
03036 Chromosome and associated proteins [BR:
oki03036
]
109894147
Transcription factors [BR:
oki03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
109894147
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
109894147
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
SSRP1_C
HMG_box_2
HMG_WDHD1
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
109894147
NCBI-ProteinID:
XP_020342977
Ensembl:
ENSOKIG00005013991
LinkDB
All DBs
Position
LG12:51233998..51252170
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AA seq
706 aa
AA seq
DB search
MGDTLEFSDIYQEVKGSWNDGRLRFGRQSVVYKSSKTGKVDSIPAAELSQAQWRRVCLGQ
GIKLTTSTGHIYKYDGFRDTDFEKISEYFKAHYKVELSEKELCVKGWNWGTTKFSGPLLS
FEVSDSPAFEIPLASVSQCATGKNEVTLEFHQNDEAEVSLMEVRFYVPPGDTATTEEGPE
PVEVFRDRVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPSFLHLHGKTFDYKIPY
TTVLRLFLLPHKDQRQMFFMISLDPPIKQGQTRYHFLILLFSKEEDLSLSLNMTEEEVER
RYGGKLSKNMSGSLYEMVGRVMKALVNKKITVPGNFLGHSGTQCITCSYKASSGLLYPLE
RGFVYIHKPPVHLRFEEVSCVNFARGTTTTRSFDFEIETKQGTQFTFSSIEREEYGKLFD
FVTAKKLSIKNRGFKEKKGIKGKDDMLEDSDEDQHDAYLERMKEEGKIREEANDSDDSDG
ESDESFNPGEEEDDIAEEYDSKASASDSSAEGGDSDREKKKRPAKKAKVVKERKPRKKKP
KDSGAPKRPMSAYFLWLNASRESIKAEHPGISITEISKRAGEMWRELGKEQKVEWDGKAE
EAKKDYEVAMREYRESGGGSSAPSKKERKKKGGKSDEKNKKGMSGGGRERERERTTGNDS
FKSREFISSEESSSESDRGKGKRKRKGSDELEEVASTPPSSDSGSD
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacacactggagttcagtgacatttaccaggaggtcaaagggtcatggaatgac
ggccgtctgcggttcggtagacagagtgtggtgtataagagcagtaagacagggaaggtg
gacagcatcccagctgcggagttgtctcaggcccagtggagacgtgtgtgtctgggacag
ggcatcaagctgaccaccagcaccgggcacatctacaaatatgacggcttcagagacacg
gactttgagaagatctctgagtacttcaaagcccactacaaagtggagctgtcagagaag
gaattgtgtgtgaagggttggaactggggcaccaccaaattctctggccctctcctgtca
ttcgaggtgagcgacagcccagcgtttgagatccccctggccagcgtgtcccagtgcgcc
acggggaagaacgaggtgacactggagttccaccagaacgatgaggcagaggtgtcgctg
atggaggtccgcttctatgtcccgcccggggacactgccaccacggaagaggggccagaa
cctgtggaggtgtttagagaccgtgtgctgtccaaggcagatgtgatccaggctacagga
gatgctgtgtgtatcttcaaagagctgcagtgtctcacgcccaggggcaggtatgatatc
cgtatctacccgagcttcctccacctccacggtaagacatttgactacaagatcccctac
accactgtgctacgtctcttcctgctaccacacaaggaccagagacagatgttcttcatg
atcagtctagacccgcccattaaacaggggcagacacgttaccacttcctcatcctgctc
ttctccaaggaggaggacctcagcctctccctcaacatgacagaggaggaggtggagagg
cgttatggggggaagctcagtaagaacatgtcaggttctctctatgagatggtcggcagg
gtgatgaaggctctggtcaacaagaagatcaccgtgccaggaaacttcctgggtcactcg
gggacccagtgtataacgtgttcctacaaagcgtcgtcaggcctgctctatcctctggag
aggggtttcgtctacatacacaagccccccgtacacctgcgcttcgaggaggtgtcgtgt
gtgaacttcgccagaggcaccaccaccacgcgctccttcgactttgagatcgaaaccaag
cagggcacccagttcaccttcagcagcattgagagagaggagtatgggaagctttttgac
tttgtgacggccaagaagctcagcatcaagaacagagggttcaaagagaaaaagggtata
aagggtaaagatgacatgttggaggactcagacgaggaccagcacgatgcctacctggag
aggatgaaagaggagggcaagatcagagaggaggccaatgacagcgatgactccgatgga
gagagcgatgagtcttttaaccctggagaggaggaagatgacatagcggaagagtatgac
agcaaggcatcagccagtgacagcagtgcagaggggggagacagtgacagagagaagaag
aagagaccagccaagaaggccaaagtggtgaaggagaggaaaccacgcaagaagaagccg
aaggacagtggcgcccccaagaggccgatgagcgcctatttcctgtggctgaacgcgagc
cgcgagagcatcaaagcagagcaccctgggatatccatcacagagatctccaagagggcc
ggggagatgtggagggaactggggaaggagcaaaaagtggagtgggatgggaaagcggag
gaggcgaagaaggactatgaggtagcgatgagggagtacagagagagtggaggaggatcc
tctgccccctccaaaaaggagaggaaaaagaagggagggaagagtgatgagaagaataag
aaggggatgtctggtggagggagggagcgagagagggagaggacgacaggaaacgacagc
tttaagagcagggagtttatctccagcgaagagagctcctcagagtcagacagaggcaag
ggcaaacgcaaacgcaagggttcagatgaactagaggaggtggcctcgaccccacccagt
tctgactcaggatcagactga
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